RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 DHX32Q7L7V1 743 aaKnown RBP10.44□□□□□ -0.74
DDB1-213ENST00000539332 DZIP1Q86YF9 867 aaKnown RBP10.44□□□□□ -0.74
DDB1-213ENST00000539332 FBXW7Q969H0 707 aa10.44□□□□□ -0.74
DDB1-213ENST00000539332 RIOK1Q9BRS2 568 aaKnown RBP10.44□□□□□ -0.74
DDB1-213ENST00000539332 NBPF3Q9H094 633 aa10.44□□□□□ -0.74
DDB1-213ENST00000539332 USP17L3A6NCW0 530 aa10.44□□□□□ -0.74
DDB1-213ENST00000539332 USP17L4A6NCW7 530 aa10.44□□□□□ -0.74
DDB1-213ENST00000539332 GSG1L2A8MUP6 293 aa10.44□□□□□ -0.74
DDB1-213ENST00000539332 PATL2C9JE40 543 aaKnown RBP10.44□□□□□ -0.74
DDB1-213ENST00000539332 DACT2Q5SW24 774 aa10.44□□□□□ -0.74
DDB1-213ENST00000539332 USP17L1Q7RTZ2 530 aa10.44□□□□□ -0.74
DDB1-213ENST00000539332 NIM1KQ8IY84 436 aa10.44□□□□□ -0.74
DDB1-213ENST00000539332 MB21D2Q8IYB1 491 aaPredicted RBP10.44□□□□□ -0.74
DDB1-213ENST00000539332 LCORLQ8N3X6 602 aa10.44□□□□□ -0.74
DDB1-213ENST00000539332 MXD3Q9BW11 206 aa10.44□□□□□ -0.74
DDB1-213ENST00000539332 PANK2Q9BZ23 570 aa10.44□□□□□ -0.74
DDB1-213ENST00000539332 TPCN1Q9ULQ1 816 aa10.44□□□□□ -0.74
DDB1-213ENST00000539332 SUGT1Q9Y2Z0 365 aa10.44□□□□□ -0.74
DDB1-213ENST00000539332 MYH1P12882 1939 aa10.43□□□□□ -0.74
DDB1-213ENST00000539332 FKBP1AP62942 108 aaKnown RBP10.43□□□□□ -0.74
DDB1-213ENST00000539332 RASSF7Q02833 373 aa10.43□□□□□ -0.74
DDB1-213ENST00000539332 DIXDC1Q155Q3 683 aa10.43□□□□□ -0.74
DDB1-213ENST00000539332 ME3Q16798 604 aa10.43□□□□□ -0.74
DDB1-213ENST00000539332 HS1BP3Q53T59 392 aa10.43□□□□□ -0.74
DDB1-213ENST00000539332 NOL8Q76FK4 1167 aaKnown RBP10.43□□□□□ -0.74
DDB1-213ENST00000539332 MIGA1Q8NAN2 632 aa10.43□□□□□ -0.74
DDB1-213ENST00000539332 TNPO1Q92973 898 aaKnown RBP10.43□□□□□ -0.74
DDB1-213ENST00000539332 ZNRF3Q9ULT6 936 aa10.43□□□□□ -0.74
DDB1-213ENST00000539332 GOLGA6L22H0YM25 854 aa10.42□□□□□ -0.74
DDB1-213ENST00000539332 YBX3P16989 372 aaKnown RBP eCLIP10.42□□□□□ -0.74
DDB1-213ENST00000539332 PRELPP51888 382 aa10.42□□□□□ -0.74
DDB1-213ENST00000539332 EVCP57679 992 aa10.42□□□□□ -0.74
DDB1-213ENST00000539332 GSTO1P78417 241 aa10.42□□□□□ -0.74
DDB1-213ENST00000539332 GIMAP6Q6P9H5 292 aa10.42□□□□□ -0.74
DDB1-213ENST00000539332 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.42□□□□□ -0.74
DDB1-213ENST00000539332 ARHGAP27Q6ZUM4 889 aa10.42□□□□□ -0.74
DDB1-213ENST00000539332 IFNL3Q8IZI9 196 aa10.42□□□□□ -0.74
DDB1-213ENST00000539332 JDP2Q8WYK2 163 aa10.42□□□□□ -0.74
DDB1-213ENST00000539332 GZF1Q9H116 711 aaPredicted RBP10.42□□□□□ -0.74
DDB1-213ENST00000539332 ARMT1Q9H993 441 aa10.42□□□□□ -0.74
DDB1-213ENST00000539332 ADAMTSL1Q8N6G6 1762 aa10.42□□□□□ -0.74
DDB1-213ENST00000539332 MAGEB6P1A0A0J9YX57 407 aa10.42□□□□□ -0.74
DDB1-213ENST00000539332 ZNF213O14771 459 aa10.42□□□□□ -0.74
DDB1-213ENST00000539332 RAD17O75943 681 aa10.42□□□□□ -0.74
DDB1-213ENST00000539332 HAND2P61296 217 aa10.42□□□□□ -0.74
DDB1-213ENST00000539332 Q6ZUG5 572 aa10.42□□□□□ -0.74
DDB1-213ENST00000539332 TBC1D10CQ8IV04 446 aa10.42□□□□□ -0.74
DDB1-213ENST00000539332 TCEANC2Q96MN5 208 aa10.42□□□□□ -0.74
DDB1-213ENST00000539332 PPP1R9BQ96SB3 815 aa10.42□□□□□ -0.74
DDB1-213ENST00000539332 ZDHHC9Q9Y397 364 aa10.42□□□□□ -0.74
DDB1-213ENST00000539332 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.42□□□□□ -0.74
DDB1-213ENST00000539332 MROH7-TTC4A0A0A0MT08 1334 aa10.41□□□□□ -0.74
DDB1-213ENST00000539332 F8W031 263 aaPredicted RBP10.41□□□□□ -0.74
DDB1-213ENST00000539332 ECM2O94769 699 aaPredicted RBP10.41□□□□□ -0.74
DDB1-213ENST00000539332 BRD1O95696 1058 aa10.41□□□□□ -0.74
DDB1-213ENST00000539332 LDHCP07864 332 aa10.41□□□□□ -0.74
DDB1-213ENST00000539332 ANTXR2P58335 489 aa10.41□□□□□ -0.74
DDB1-213ENST00000539332 MTERF4Q7Z6M4 381 aaKnown RBP10.41□□□□□ -0.74
DDB1-213ENST00000539332 NCOA7Q8NI08 942 aa10.41□□□□□ -0.74
DDB1-213ENST00000539332 AATFQ9NY61 560 aaKnown RBP eCLIP10.41□□□□□ -0.74
DDB1-213ENST00000539332 ANAPC4Q9UJX5 808 aa10.41□□□□□ -0.74
DDB1-213ENST00000539332 TTF2Q9UNY4 1162 aaKnown RBP10.41□□□□□ -0.74
DDB1-213ENST00000539332 MYH6P13533 1939 aa10.41□□□□□ -0.74
DDB1-213ENST00000539332 MYH8P13535 1937 aa10.41□□□□□ -0.74
DDB1-213ENST00000539332 GAKO14976 1311 aa10.4□□□□□ -0.74
DDB1-213ENST00000539332 PSMD14O00487 310 aa10.4□□□□□ -0.74
DDB1-213ENST00000539332 VIL1P09327 827 aaKnown RBP10.4□□□□□ -0.74
DDB1-213ENST00000539332 DYNLL1P63167 89 aaKnown RBP10.4□□□□□ -0.74
DDB1-213ENST00000539332 CXCL9Q07325 125 aa10.4□□□□□ -0.74
DDB1-213ENST00000539332 PKP1Q13835 747 aa10.4□□□□□ -0.74
DDB1-213ENST00000539332 ZSCAN30Q86W11 494 aa10.4□□□□□ -0.74
DDB1-213ENST00000539332 KIAA0825Q8IV33 1275 aa10.4□□□□□ -0.74
DDB1-213ENST00000539332 CCDC83Q8IWF9 413 aa10.4□□□□□ -0.74
DDB1-213ENST00000539332 SLF2Q8IX21 1173 aa10.4□□□□□ -0.74
DDB1-213ENST00000539332 STAG1Q8WVM7 1258 aa10.4□□□□□ -0.74
DDB1-213ENST00000539332 GTF3C6Q969F1 213 aa10.4□□□□□ -0.74
DDB1-213ENST00000539332 FAM163AQ96GL9 167 aaPredicted RBP10.4□□□□□ -0.74
DDB1-213ENST00000539332 LARP6Q9BRS8 491 aaKnown RBP10.4□□□□□ -0.74
DDB1-213ENST00000539332 NACAP1Q9BZK3 213 aa10.4□□□□□ -0.74
DDB1-213ENST00000539332 NAPBQ9H115 298 aa10.4□□□□□ -0.74
DDB1-213ENST00000539332 SLC4A4Q9Y6R1 1079 aa10.4□□□□□ -0.74
DDB1-213ENST00000539332 MYO3BQ8WXR4 1341 aa10.4□□□□□ -0.75
DDB1-213ENST00000539332 PRKAB2O43741 272 aa10.39□□□□□ -0.75
DDB1-213ENST00000539332 PFKFB2O60825 505 aa10.39□□□□□ -0.75
DDB1-213ENST00000539332 LMNB1P20700 586 aa10.39□□□□□ -0.75
DDB1-213ENST00000539332 MCM5P33992 734 aa10.39□□□□□ -0.75
DDB1-213ENST00000539332 SCNN1DP51172 638 aa10.39□□□□□ -0.75
DDB1-213ENST00000539332 PPP4CP60510 307 aa10.39□□□□□ -0.75
DDB1-213ENST00000539332 RSBN1LQ6PCB5 846 aaPredicted RBP10.39□□□□□ -0.75
DDB1-213ENST00000539332 ZNF274Q96GC6 653 aaPredicted RBP10.39□□□□□ -0.75
DDB1-213ENST00000539332 MTA3Q9BTC8 594 aa10.39□□□□□ -0.75
DDB1-213ENST00000539332 TACC3Q9Y6A5 838 aa10.39□□□□□ -0.75
DDB1-213ENST00000539332 NEDD4P46934 1319 aa10.39□□□□□ -0.75
DDB1-213ENST00000539332 GPR75-ASB3A0A0A6YYF3 556 aa10.39□□□□□ -0.75
DDB1-213ENST00000539332 BAG3O95817 575 aa10.39□□□□□ -0.75
DDB1-213ENST00000539332 APPP05067 770 aa10.39□□□□□ -0.75
DDB1-213ENST00000539332 AKNAD1Q5T1N1 836 aa10.39□□□□□ -0.75
DDB1-213ENST00000539332 HHIPL2Q6UWX4 724 aa10.39□□□□□ -0.75
DDB1-213ENST00000539332 BRF1Q92994 677 aa10.39□□□□□ -0.75
DDB1-213ENST00000539332 TEKT1Q969V4 418 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms