RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 FAM221AA4D161 298 aa1.57□□□□□ -2.16
HIF1A-204ENST00000539097 FAM83GA6ND36 823 aa1.57□□□□□ -2.16
HIF1A-204ENST00000539097 TLR3O15455 904 aaKnown RBP1.57□□□□□ -2.16
HIF1A-204ENST00000539097 KLF4O43474 513 aa1.57□□□□□ -2.16
HIF1A-204ENST00000539097 PHACTR2O75167 634 aa1.57□□□□□ -2.16
HIF1A-204ENST00000539097 VIL1P09327 827 aaKnown RBP1.57□□□□□ -2.16
HIF1A-204ENST00000539097 ACRP10323 421 aa1.57□□□□□ -2.16
HIF1A-204ENST00000539097 HOXB4P17483 251 aaPredicted RBP1.57□□□□□ -2.16
HIF1A-204ENST00000539097 CES1P23141 567 aa1.57□□□□□ -2.16
HIF1A-204ENST00000539097 SRSF11Q05519 484 aaKnown RBP1.57□□□□□ -2.16
HIF1A-204ENST00000539097 COL9A3Q14050 684 aaPredicted RBP1.57□□□□□ -2.16
HIF1A-204ENST00000539097 GPR158Q5T848 1215 aa1.57□□□□□ -2.16
HIF1A-204ENST00000539097 SPATC1Q76KD6 591 aa1.57□□□□□ -2.16
HIF1A-204ENST00000539097 PDZD3Q86UT5 571 aa1.57□□□□□ -2.16
HIF1A-204ENST00000539097 FCHSD1Q86WN1 690 aa1.57□□□□□ -2.16
HIF1A-204ENST00000539097 RPUSD2Q8IZ73 545 aaKnown RBP1.57□□□□□ -2.16
HIF1A-204ENST00000539097 LILRB2Q8N423 598 aa1.57□□□□□ -2.16
HIF1A-204ENST00000539097 BHMTQ93088 406 aa1.57□□□□□ -2.16
HIF1A-204ENST00000539097 NXPE3Q969Y0 559 aa1.57□□□□□ -2.16
HIF1A-204ENST00000539097 OSMRQ99650 979 aa1.57□□□□□ -2.16
HIF1A-204ENST00000539097 ZC3H12CQ9C0D7 883 aaKnown RBP1.57□□□□□ -2.16
HIF1A-204ENST00000539097 SH2B1Q9NRF2 756 aaPredicted RBP1.57□□□□□ -2.16
HIF1A-204ENST00000539097 PLAAQ9Y263 795 aa1.57□□□□□ -2.16
HIF1A-204ENST00000539097 EFR3BQ9Y2G0 817 aa1.57□□□□□ -2.16
HIF1A-204ENST00000539097 POLR3KQ9Y2Y1 108 aaPredicted RBP1.57□□□□□ -2.16
HIF1A-204ENST00000539097 SUPT16HQ9Y5B9 1047 aaKnown RBP1.57□□□□□ -2.16
HIF1A-204ENST00000539097 FAM86C2PA6NEL3 165 aa1.57□□□□□ -2.16
HIF1A-204ENST00000539097 KHNYNO15037 678 aaKnown RBP1.57□□□□□ -2.16
HIF1A-204ENST00000539097 CILPO75339 1184 aa1.57□□□□□ -2.16
HIF1A-204ENST00000539097 PF4P02776 101 aa1.57□□□□□ -2.16
HIF1A-204ENST00000539097 PSAPP07602 524 aa1.57□□□□□ -2.16
HIF1A-204ENST00000539097 POU3F3P20264 500 aaPredicted RBP1.57□□□□□ -2.16
HIF1A-204ENST00000539097 NTF4P34130 210 aa1.57□□□□□ -2.16
HIF1A-204ENST00000539097 BAG6P46379 1132 aa1.57□□□□□ -2.16
HIF1A-204ENST00000539097 INPP5AQ14642 412 aa1.57□□□□□ -2.16
HIF1A-204ENST00000539097 CCDC85BQ15834 202 aaPredicted RBP1.57□□□□□ -2.16
HIF1A-204ENST00000539097 SKIDA1Q1XH10 827 aa1.57□□□□□ -2.16
HIF1A-204ENST00000539097 ACBD5Q5T8D3 534 aaPredicted RBP1.57□□□□□ -2.16
HIF1A-204ENST00000539097 SLC6A19Q695T7 634 aa1.57□□□□□ -2.16
HIF1A-204ENST00000539097 RIPOR1Q6ZS17 1223 aa1.57□□□□□ -2.16
HIF1A-204ENST00000539097 CCDC155Q8N6L0 562 aa1.57□□□□□ -2.16
HIF1A-204ENST00000539097 GOLM1Q8NBJ4 401 aa1.57□□□□□ -2.16
HIF1A-204ENST00000539097 ZNF296Q8WUU4 475 aaPredicted RBP1.57□□□□□ -2.16
HIF1A-204ENST00000539097 OXCT2Q9BYC2 517 aaPredicted RBP1.57□□□□□ -2.16
HIF1A-204ENST00000539097 WNT8AQ9H1J5 351 aa1.57□□□□□ -2.16
HIF1A-204ENST00000539097 IGFLR1Q9H665 355 aa1.57□□□□□ -2.16
HIF1A-204ENST00000539097 SEC31BQ9NQW1 1179 aa1.57□□□□□ -2.16
HIF1A-204ENST00000539097 WDR3Q9UNX4 943 aaKnown RBP eCLIP1.57□□□□□ -2.16
HIF1A-204ENST00000539097 INPP5FQ9Y2H2 1132 aa1.57□□□□□ -2.16
HIF1A-204ENST00000539097 UPK3BL1B0FP48 263 aa1.57□□□□□ -2.16
HIF1A-204ENST00000539097 UPK3BL2E5RIL1 263 aa1.57□□□□□ -2.16
HIF1A-204ENST00000539097 ADAM11O75078 769 aa1.57□□□□□ -2.16
HIF1A-204ENST00000539097 PTPRAP18433 802 aa1.57□□□□□ -2.16
HIF1A-204ENST00000539097 BMP6P22004 513 aa1.57□□□□□ -2.16
HIF1A-204ENST00000539097 POLR2BP30876 1174 aaKnown RBP1.57□□□□□ -2.16
HIF1A-204ENST00000539097 NASPP49321 788 aaPredicted RBP1.57□□□□□ -2.16
HIF1A-204ENST00000539097 ZNF252P-AS1Q0IIN9 211 aa1.57□□□□□ -2.16
HIF1A-204ENST00000539097 SPEM2Q0P670 501 aa1.57□□□□□ -2.16
HIF1A-204ENST00000539097 GRB10Q13322 594 aa1.57□□□□□ -2.16
HIF1A-204ENST00000539097 KRT72Q14CN4 511 aa1.57□□□□□ -2.16
HIF1A-204ENST00000539097 GRIK5Q16478 980 aa1.57□□□□□ -2.16
HIF1A-204ENST00000539097 TRIM61Q5EBN2 209 aa1.57□□□□□ -2.16
HIF1A-204ENST00000539097 EGFLAMQ63HQ2 1017 aa1.57□□□□□ -2.16
HIF1A-204ENST00000539097 FBXO11Q86XK2 927 aa1.57□□□□□ -2.16
HIF1A-204ENST00000539097 TMEM151AQ8N4L1 468 aa1.57□□□□□ -2.16
HIF1A-204ENST00000539097 GIMAP7Q8NHV1 300 aa1.57□□□□□ -2.16
HIF1A-204ENST00000539097 SPACA7Q96KW9 195 aa1.57□□□□□ -2.16
HIF1A-204ENST00000539097 NECAB3Q96P71 396 aaPredicted RBP1.57□□□□□ -2.16
HIF1A-204ENST00000539097 ZSWIM4Q9H7M6 989 aa1.57□□□□□ -2.16
HIF1A-204ENST00000539097 SNX11Q9Y5W9 270 aa1.57□□□□□ -2.16
HIF1A-204ENST00000539097 GSC2O15499 205 aa1.57□□□□□ -2.16
HIF1A-204ENST00000539097 RARAP10276 462 aa1.57□□□□□ -2.16
HIF1A-204ENST00000539097 RPL6Q02878 288 aaKnown RBP1.57□□□□□ -2.16
HIF1A-204ENST00000539097 RING1Q06587 406 aa1.57□□□□□ -2.16
HIF1A-204ENST00000539097 FSTL1Q12841 308 aa1.57□□□□□ -2.16
HIF1A-204ENST00000539097 LONRF3Q496Y0 759 aa1.57□□□□□ -2.16
HIF1A-204ENST00000539097 PERM1Q5SV97 790 aa1.57□□□□□ -2.16
HIF1A-204ENST00000539097 YOD1Q5VVQ6 348 aaPredicted RBP1.57□□□□□ -2.16
HIF1A-204ENST00000539097 C20orf204Q6ZNR8 217 aa1.57□□□□□ -2.16
HIF1A-204ENST00000539097 DHX32Q7L7V1 743 aaKnown RBP1.57□□□□□ -2.16
HIF1A-204ENST00000539097 AHI1Q8N157 1196 aa1.57□□□□□ -2.16
HIF1A-204ENST00000539097 CRACR2BQ8N4Y2 399 aaPredicted RBP1.57□□□□□ -2.16
HIF1A-204ENST00000539097 ZSCAN1Q8NBB4 408 aa1.57□□□□□ -2.16
HIF1A-204ENST00000539097 BSNDQ8WZ55 320 aa1.57□□□□□ -2.16
HIF1A-204ENST00000539097 FBXL18Q96ME1 805 aa1.57□□□□□ -2.16
HIF1A-204ENST00000539097 LPIN3Q9BQK8 851 aa1.57□□□□□ -2.16
HIF1A-204ENST00000539097 PBX4Q9BYU1 374 aa1.57□□□□□ -2.16
HIF1A-204ENST00000539097 ZNF576Q9H609 170 aa1.57□□□□□ -2.16
HIF1A-204ENST00000539097 ST7Q9NRC1 585 aa1.57□□□□□ -2.16
HIF1A-204ENST00000539097 ENAMQ9NRM1 1142 aa1.57□□□□□ -2.16
HIF1A-204ENST00000539097 PCDHB10Q9UN67 800 aa1.57□□□□□ -2.16
HIF1A-204ENST00000539097 AKAP2Q9Y2D5 859 aa1.57□□□□□ -2.16
HIF1A-204ENST00000539097 STARD13Q9Y3M8 1113 aa1.57□□□□□ -2.16
HIF1A-204ENST00000539097 H3BM21 787 aa1.56□□□□□ -2.16
HIF1A-204ENST00000539097 DDX3YO15523 660 aaKnown RBP1.56□□□□□ -2.16
HIF1A-204ENST00000539097 TBX1O43435 398 aa1.56□□□□□ -2.16
HIF1A-204ENST00000539097 DIAPH1O60610 1272 aaKnown RBP1.56□□□□□ -2.16
HIF1A-204ENST00000539097 SMNDC1O75940 238 aaKnown RBP eCLIP1.56□□□□□ -2.163e-7■■□□□ 14.1
HIF1A-204ENST00000539097 ATP2B1P20020 1258 aa1.56□□□□□ -2.16
HIF1A-204ENST00000539097 EIF4A3P38919 411 aaKnown RBP1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms