RNA–Protein interactions for RNA: ENST00000538998.1

PBX3-212, Transcript of PBX homeobox 3, humanhuman

TSL 2

Gene PBX3, Length 1,035 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-212ENST00000538998 GADL1Q6ZQY3 521 aa17.66■□□□□ 0.42
PBX3-212ENST00000538998 SMCR8Q8TEV9 937 aaPredicted RBP17.66■□□□□ 0.42
PBX3-212ENST00000538998 LRCH3Q96II8 777 aa17.66■□□□□ 0.42
PBX3-212ENST00000538998 STAP2Q9UGK3 403 aa17.66■□□□□ 0.42
PBX3-212ENST00000538998 AFG3L2Q9Y4W6 797 aa17.66■□□□□ 0.42
PBX3-212ENST00000538998 MGAMO43451 1857 aa17.65■□□□□ 0.42
PBX3-212ENST00000538998 COA7Q96BR5 231 aa17.65■□□□□ 0.42
PBX3-212ENST00000538998 CRISPLD2Q9H0B8 497 aa17.65■□□□□ 0.42
PBX3-212ENST00000538998 GNL3LQ9NVN8 582 aaKnown RBP17.65■□□□□ 0.42
PBX3-212ENST00000538998 EYA2O00167 538 aa17.64■□□□□ 0.41
PBX3-212ENST00000538998 ENTPD3O75355 529 aa17.64■□□□□ 0.41
PBX3-212ENST00000538998 GPR153Q6NV75 609 aa17.64■□□□□ 0.41
PBX3-212ENST00000538998 NECAB2Q7Z6G3 386 aa17.64■□□□□ 0.41
PBX3-212ENST00000538998 ZFPM1Q8IX07 1006 aa17.64■□□□□ 0.41
PBX3-212ENST00000538998 PAWRQ96IZ0 340 aaKnown RBP17.64■□□□□ 0.41
PBX3-212ENST00000538998 IDI2Q9BXS1 227 aa17.64■□□□□ 0.41
PBX3-212ENST00000538998 MRS2Q9HD23 443 aa17.64■□□□□ 0.41
PBX3-212ENST00000538998 LRRFIP2Q9Y608 721 aaKnown RBP17.64■□□□□ 0.41
PBX3-212ENST00000538998 SALL1Q9NSC2 1324 aa17.64■□□□□ 0.41
PBX3-212ENST00000538998 BMP8BP34820 402 aa17.63■□□□□ 0.41
PBX3-212ENST00000538998 RGS3P49796 1198 aa17.63■□□□□ 0.41
PBX3-212ENST00000538998 MNX1P50219 401 aaPredicted RBP17.63■□□□□ 0.41
PBX3-212ENST00000538998 ANKLE1Q8NAG6 615 aa17.63■□□□□ 0.41
PBX3-212ENST00000538998 TAOK2Q9UL54 1235 aa17.63■□□□□ 0.41
PBX3-212ENST00000538998 AGTPBP1Q9UPW5 1226 aa17.63■□□□□ 0.41
PBX3-212ENST00000538998 MYH13Q9UKX3 1938 aa17.62■□□□□ 0.41
PBX3-212ENST00000538998 CTNND1O60716 968 aaKnown RBP17.62■□□□□ 0.41
PBX3-212ENST00000538998 MAP3K10Q02779 954 aa17.62■□□□□ 0.41
PBX3-212ENST00000538998 ZSCAN29Q8IWY8 852 aaPredicted RBP17.62■□□□□ 0.41
PBX3-212ENST00000538998 GDF15Q99988 308 aa17.62■□□□□ 0.41
PBX3-212ENST00000538998 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.62■□□□□ 0.41
PBX3-212ENST00000538998 PNMA3Q9UL41 463 aa17.62■□□□□ 0.41
PBX3-212ENST00000538998 DENND2AQ9ULE3 1009 aa17.62■□□□□ 0.41
PBX3-212ENST00000538998 PTPRCP08575 1304 aa17.62■□□□□ 0.41
PBX3-212ENST00000538998 AK9Q5TCS8 1911 aa17.62■□□□□ 0.41
PBX3-212ENST00000538998 DOCK2Q92608 1830 aa17.61■□□□□ 0.41
PBX3-212ENST00000538998 TRIM75PA6NK02 468 aa17.61■□□□□ 0.41
PBX3-212ENST00000538998 SEMA3EO15041 775 aa17.61■□□□□ 0.41
PBX3-212ENST00000538998 RFX5P48382 616 aaPredicted RBP17.61■□□□□ 0.41
PBX3-212ENST00000538998 FAM110CQ1W6H9 321 aa17.61■□□□□ 0.41
PBX3-212ENST00000538998 ZGPATQ8N5A5 531 aaKnown RBP17.61■□□□□ 0.41
PBX3-212ENST00000538998 ANKRD13CQ8N6S4 541 aa17.61■□□□□ 0.41
PBX3-212ENST00000538998 USP44Q9H0E7 712 aa17.61■□□□□ 0.41
PBX3-212ENST00000538998 RFX7Q2KHR2 1363 aa17.61■□□□□ 0.41
PBX3-212ENST00000538998 ATP2B3Q16720 1220 aa17.6■□□□□ 0.41
PBX3-212ENST00000538998 ATG9AQ7Z3C6 839 aa17.6■□□□□ 0.41
PBX3-212ENST00000538998 C7orf61Q8IZ16 206 aa17.6■□□□□ 0.41
PBX3-212ENST00000538998 DIS3LQ8TF46 1054 aaKnown RBP17.6■□□□□ 0.41
PBX3-212ENST00000538998 FBXO3Q9UK99 471 aa17.6■□□□□ 0.41
PBX3-212ENST00000538998 GAKO14976 1311 aa17.6■□□□□ 0.41
PBX3-212ENST00000538998 HMGCRP04035 888 aa17.59■□□□□ 0.41
PBX3-212ENST00000538998 SH3BP5LQ7L8J4 393 aa17.59■□□□□ 0.41
PBX3-212ENST00000538998 SLF2Q8IX21 1173 aa17.59■□□□□ 0.41
PBX3-212ENST00000538998 MRPL50Q8N5N7 158 aaKnown RBP17.59■□□□□ 0.41
PBX3-212ENST00000538998 DEFB123Q8N688 67 aa17.59■□□□□ 0.41
PBX3-212ENST00000538998 PROCA1Q8NCQ7 364 aaPredicted RBP17.59■□□□□ 0.41
PBX3-212ENST00000538998 LAMA3Q16787 3333 aa17.58■□□□□ 0.41
PBX3-212ENST00000538998 DDTLA6NHG4 134 aaPredicted RBP17.58■□□□□ 0.4
PBX3-212ENST00000538998 ZBTB22O15209 634 aa17.58■□□□□ 0.4
PBX3-212ENST00000538998 CIAO1O76071 339 aa17.58■□□□□ 0.4
PBX3-212ENST00000538998 NBPF3Q9H094 633 aa17.58■□□□□ 0.4
PBX3-212ENST00000538998 CEP126Q9P2H0 1117 aa17.58■□□□□ 0.4
PBX3-212ENST00000538998 DOCK1Q14185 1865 aa17.58■□□□□ 0.4
PBX3-212ENST00000538998 COL6A3P12111 3177 aa17.58■□□□□ 0.4
PBX3-212ENST00000538998 RPTORQ8N122 1335 aa17.57■□□□□ 0.4
PBX3-212ENST00000538998 GCLCP48506 637 aaPredicted RBP17.57■□□□□ 0.4
PBX3-212ENST00000538998 LRIT3Q3SXY7 679 aa17.57■□□□□ 0.4
PBX3-212ENST00000538998 TREML2Q5T2D2 321 aa17.57■□□□□ 0.4
PBX3-212ENST00000538998 DZIP1Q86YF9 867 aaKnown RBP17.57■□□□□ 0.4
PBX3-212ENST00000538998 ZMYND8Q9ULU4 1186 aaPredicted RBP17.57■□□□□ 0.4
PBX3-212ENST00000538998 PHKA1P46020 1223 aa17.56■□□□□ 0.4
PBX3-212ENST00000538998 PABPC4Q13310 644 aaKnown RBP eCLIP17.56■□□□□ 0.4
PBX3-212ENST00000538998 PICALMQ13492 652 aa17.56■□□□□ 0.4
PBX3-212ENST00000538998 FAM163AQ96GL9 167 aaPredicted RBP17.56■□□□□ 0.4
PBX3-212ENST00000538998 TBC1D2Q9BYX2 928 aa17.56■□□□□ 0.4
PBX3-212ENST00000538998 SIL1Q9H173 461 aa17.56■□□□□ 0.4
PBX3-212ENST00000538998 HMX1Q9NP08 348 aaPredicted RBP17.56■□□□□ 0.4
PBX3-212ENST00000538998 DDX4Q9NQI0 724 aaKnown RBP17.56■□□□□ 0.4
PBX3-212ENST00000538998 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.56■□□□□ 0.4
PBX3-212ENST00000538998 STXBP5LQ9Y2K9 1186 aa17.56■□□□□ 0.4
PBX3-212ENST00000538998 PTPRFP10586 1907 aa17.56■□□□□ 0.4
PBX3-212ENST00000538998 ALPK3Q96L96 1907 aa17.55■□□□□ 0.4
PBX3-212ENST00000538998 PDS5AQ29RF7 1337 aaKnown RBP17.55■□□□□ 0.4
PBX3-212ENST00000538998 TBC1D12O60347 775 aa17.55■□□□□ 0.4
PBX3-212ENST00000538998 BTDP43251 543 aa17.55■□□□□ 0.4
PBX3-212ENST00000538998 CCDC84Q86UT8 332 aaPredicted RBP17.55■□□□□ 0.4
PBX3-212ENST00000538998 TDHQ8IZJ6 230 aa17.55■□□□□ 0.4
PBX3-212ENST00000538998 OSBPL5Q9H0X9 879 aaPredicted RBP17.55■□□□□ 0.4
PBX3-212ENST00000538998 C11orf49Q9H6J7 331 aa17.55■□□□□ 0.4
PBX3-212ENST00000538998 PHIPQ8WWQ0 1821 aa17.54■□□□□ 0.4
PBX3-212ENST00000538998 SLURP2P0DP57 97 aa17.54■□□□□ 0.4
PBX3-212ENST00000538998 IL15P40933 162 aaPredicted RBP17.54■□□□□ 0.4
PBX3-212ENST00000538998 MAGEA10P43363 369 aaPredicted RBP17.54■□□□□ 0.4
PBX3-212ENST00000538998 SPTY2D1Q68D10 685 aaPredicted RBP17.54■□□□□ 0.4
PBX3-212ENST00000538998 CCDC102BQ68D86 513 aa17.54■□□□□ 0.4
PBX3-212ENST00000538998 ABCF2Q9UG63 623 aa17.54■□□□□ 0.4
PBX3-212ENST00000538998 MROH7-TTC4A0A0A0MT08 1334 aa17.53■□□□□ 0.4
PBX3-212ENST00000538998 NPM3O75607 178 aaKnown RBP17.53■□□□□ 0.4
PBX3-212ENST00000538998 SYN1P17600 705 aa17.53■□□□□ 0.4
PBX3-212ENST00000538998 SPP2Q13103 211 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms