RNA–Protein interactions for RNA: ENST00000538740.1

DDX11-212, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-212ENST00000538740 MTA3Q9BTC8 594 aa21.36■■□□□ 1.01
DDX11-212ENST00000538740 DCP1AQ9NPI6 582 aaPredicted RBP21.36■■□□□ 1.01
DDX11-212ENST00000538740 ZNF277Q9NRM2 450 aaPredicted RBP21.36■■□□□ 1.01
DDX11-212ENST00000538740 EXOSC10Q01780 885 aaKnown RBP21.35■■□□□ 1.01
DDX11-212ENST00000538740 SART3Q15020 963 aaKnown RBP21.35■■□□□ 1.01
DDX11-212ENST00000538740 TBC1D10CQ8IV04 446 aa21.35■■□□□ 1.01
DDX11-212ENST00000538740 MB21D2Q8IYB1 491 aaPredicted RBP21.35■■□□□ 1.01
DDX11-212ENST00000538740 CERS5Q8N5B7 392 aa21.35■■□□□ 1.01
DDX11-212ENST00000538740 SH3RF3Q8TEJ3 882 aaPredicted RBP21.35■■□□□ 1.01
DDX11-212ENST00000538740 TMEM87BQ96K49 555 aa21.35■■□□□ 1.01
DDX11-212ENST00000538740 HDAC9Q9UKV0 1011 aa21.35■■□□□ 1.01
DDX11-212ENST00000538740 ZNRF3Q9ULT6 936 aa21.35■■□□□ 1.01
DDX11-212ENST00000538740 DAGLAQ9Y4D2 1042 aa21.35■■□□□ 1.01
DDX11-212ENST00000538740 DDX60LQ5H9U9 1706 aaKnown RBP21.35■■□□□ 1.01
DDX11-212ENST00000538740 F8W031 263 aaPredicted RBP21.34■■□□□ 1.01
DDX11-212ENST00000538740 PRC1O43663 620 aa21.34■■□□□ 1.01
DDX11-212ENST00000538740 ZNF287Q9HBT7 754 aa21.34■■□□□ 1.01
DDX11-212ENST00000538740 TOMM22Q9NS69 142 aa21.34■■□□□ 1.01
DDX11-212ENST00000538740 MMP14P50281 582 aa21.33■■□□□ 1.01
DDX11-212ENST00000538740 CTDSPL2Q05D32 466 aa21.33■■□□□ 1.01
DDX11-212ENST00000538740 PDE4BQ07343 736 aa21.33■■□□□ 1.01
DDX11-212ENST00000538740 ESR2Q92731 530 aa21.33■■□□□ 1.01
DDX11-212ENST00000538740 AGXT2Q9BYV1 514 aa21.33■■□□□ 1.01
DDX11-212ENST00000538740 MCM9Q9NXL9 1143 aa21.33■■□□□ 1.01
DDX11-212ENST00000538740 SERPINA10Q9UK55 444 aa21.33■■□□□ 1.01
DDX11-212ENST00000538740 MYH8P13535 1937 aa21.32■■□□□ 1
DDX11-212ENST00000538740 ERICH2A1L162 156 aa21.32■■□□□ 1
DDX11-212ENST00000538740 USP17L12C9JPN9 530 aa21.32■■□□□ 1
DDX11-212ENST00000538740 USP17L21D6R901 530 aa21.32■■□□□ 1
DDX11-212ENST00000538740 CRKP46108 304 aa21.32■■□□□ 1
DDX11-212ENST00000538740 TOB2Q14106 344 aaPredicted RBP21.32■■□□□ 1
DDX11-212ENST00000538740 RSBN1LQ6PCB5 846 aaPredicted RBP21.32■■□□□ 1
DDX11-212ENST00000538740 CTR9Q6PD62 1173 aa21.32■■□□□ 1
DDX11-212ENST00000538740 ZDHHC15Q96MV8 337 aa21.32■■□□□ 1
DDX11-212ENST00000538740 NBPF3Q9H094 633 aa21.32■■□□□ 1
DDX11-212ENST00000538740 B4E1Z4 1266 aa21.31■■□□□ 1
DDX11-212ENST00000538740 POLR3DP05423 398 aaPredicted RBP21.31■■□□□ 1
DDX11-212ENST00000538740 TNIP1Q15025 636 aa21.31■■□□□ 1
DDX11-212ENST00000538740 KIAA0825Q8IV33 1275 aa21.31■■□□□ 1
DDX11-212ENST00000538740 TGFBRAP1Q8WUH2 860 aa21.31■■□□□ 1
DDX11-212ENST00000538740 BRF1Q92994 677 aa21.31■■□□□ 1
DDX11-212ENST00000538740 TCEANC2Q96MN5 208 aa21.31■■□□□ 1
DDX11-212ENST00000538740 DICER1Q9UPY3 1922 aaKnown RBP21.31■■□□□ 1
DDX11-212ENST00000538740 ADAMTSL1Q8N6G6 1762 aa21.31■■□□□ 1
DDX11-212ENST00000538740 NEDD4P46934 1319 aa21.3■■□□□ 1
DDX11-212ENST00000538740 YDJCA8MPS7 323 aa21.3■■□□□ 1
DDX11-212ENST00000538740 PDIA4P13667 645 aaKnown RBP21.3■■□□□ 1
DDX11-212ENST00000538740 SCNN1DP51172 638 aa21.3■■□□□ 1
DDX11-212ENST00000538740 RBM5P52756 815 aaKnown RBP eCLIP21.3■■□□□ 1
DDX11-212ENST00000538740 NUCB2P80303 420 aa21.3■■□□□ 1
DDX11-212ENST00000538740 OGFOD1Q8N543 542 aa21.3■■□□□ 1
DDX11-212ENST00000538740 AGBL3Q8NEM8 1001 aa21.3■■□□□ 1
DDX11-212ENST00000538740 FOXD4L1Q9NU39 408 aa21.3■■□□□ 1
DDX11-212ENST00000538740 TPCN1Q9ULQ1 816 aa21.3■■□□□ 1
DDX11-212ENST00000538740 ROBO3Q96MS0 1386 aa21.3■■□□□ 1
DDX11-212ENST00000538740 ORC4O43929 436 aa21.29■■□□□ 1
DDX11-212ENST00000538740 VIL1P09327 827 aaKnown RBP21.29■■□□□ 1
DDX11-212ENST00000538740 RHBDL3P58872 404 aa21.29■■□□□ 1
DDX11-212ENST00000538740 RRP12Q5JTH9 1297 aaKnown RBP21.29■■□□□ 1
DDX11-212ENST00000538740 ZNF274Q96GC6 653 aaPredicted RBP21.29■■□□□ 1
DDX11-212ENST00000538740 MXD3Q9BW11 206 aa21.29■■□□□ 1
DDX11-212ENST00000538740 USP40Q9NVE5 1235 aa21.29■■□□□ 1
DDX11-212ENST00000538740 ANGEL1Q9UNK9 670 aaKnown RBP21.29■■□□□ 1
DDX11-212ENST00000538740 SMC3Q9UQE7 1217 aa21.29■■□□□ 1
DDX11-212ENST00000538740 FLT1P17948 1338 aa21.29■■□□□ 1
DDX11-212ENST00000538740 NFKBIEO00221 500 aa21.28■■□□□ 1
DDX11-212ENST00000538740 KDM4AO75164 1064 aa21.28■■□□□ 1
DDX11-212ENST00000538740 ME3Q16798 604 aa21.28■■□□□ 1
DDX11-212ENST00000538740 C12orf60Q5U649 245 aa21.28■■□□□ 1
DDX11-212ENST00000538740 CIAPIN1Q6FI81 312 aa21.28■■□□□ 1
DDX11-212ENST00000538740 TTC6Q86TZ1 520 aa21.28■■□□□ 1
DDX11-212ENST00000538740 IQCA1Q86XH1 822 aa21.28■■□□□ 1
DDX11-212ENST00000538740 MAPKAPK5Q8IW41 473 aa21.28■■□□□ 1
DDX11-212ENST00000538740 TMTC2Q8N394 836 aa21.28■■□□□ 1
DDX11-212ENST00000538740 UBAC1Q9BSL1 405 aa21.28■■□□□ 1
DDX11-212ENST00000538740 KCNQ5Q9NR82 932 aa21.28■■□□□ 1
DDX11-212ENST00000538740 MKRN1Q9UHC7 482 aaKnown RBP21.28■■□□□ 1
DDX11-212ENST00000538740 TAOK2Q9UL54 1235 aa21.28■■□□□ 1
DDX11-212ENST00000538740 DHX16O60231 1041 aaKnown RBP21.27■■□□□ 1
DDX11-212ENST00000538740 RAD17O75943 681 aa21.27■■□□□ 1
DDX11-212ENST00000538740 FGRP09769 529 aa21.27■■□□□ 1
DDX11-212ENST00000538740 CCDC178Q5BJE1 867 aa21.27■■□□□ 1
DDX11-212ENST00000538740 SYNE3Q6ZMZ3 975 aa21.27■■□□□ 1
DDX11-212ENST00000538740 CCDC83Q8IWF9 413 aa21.27■■□□□ 1
DDX11-212ENST00000538740 LRRC2Q9BYS8 371 aa21.27■■□□□ 1
DDX11-212ENST00000538740 TMOD2Q9NZR1 351 aa21.27■■□□□ 1
DDX11-212ENST00000538740 KIF3AQ9Y496 699 aa21.27■■□□□ 1
DDX11-212ENST00000538740 COL4A5P29400 1685 aa21.26■□□□□ 0.99
DDX11-212ENST00000538740 PSMD14O00487 310 aa21.26■□□□□ 0.99
DDX11-212ENST00000538740 IFIT3O14879 490 aaKnown RBP21.26■□□□□ 0.99
DDX11-212ENST00000538740 RPS12P25398 132 aaKnown RBP21.26■□□□□ 0.99
DDX11-212ENST00000538740 DDIT3P35638 169 aa21.26■□□□□ 0.99
DDX11-212ENST00000538740 LIFRP42702 1097 aa21.26■□□□□ 0.99
DDX11-212ENST00000538740 EIF6P56537 245 aaKnown RBP21.26■□□□□ 0.99
DDX11-212ENST00000538740 EVCP57679 992 aa21.26■□□□□ 0.99
DDX11-212ENST00000538740 ANTXR2P58335 489 aa21.26■□□□□ 0.99
DDX11-212ENST00000538740 TMEM67Q5HYA8 995 aa21.26■□□□□ 0.99
DDX11-212ENST00000538740 NAP1L2Q9ULW6 460 aaPredicted RBP21.26■□□□□ 0.99
DDX11-212ENST00000538740 SH2B2O14492 632 aaPredicted RBP21.25■□□□□ 0.99
DDX11-212ENST00000538740 PFKFB2O60825 505 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms