RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 NLGN1Q8N2Q7 840 aa16.55■□□□□ 0.24
ACTN1-205ENST00000538545 RNF214Q8ND24 703 aa16.55■□□□□ 0.24
ACTN1-205ENST00000538545 SH3RF3Q8TEJ3 882 aaPredicted RBP16.55■□□□□ 0.24
ACTN1-205ENST00000538545 LLPHQ9BRT6 129 aaKnown RBP16.55■□□□□ 0.24
ACTN1-205ENST00000538545 FAM217BQ9NTX9 383 aaPredicted RBP16.55■□□□□ 0.24
ACTN1-205ENST00000538545 SEMA3EO15041 775 aa16.55■□□□□ 0.24
ACTN1-205ENST00000538545 POLR3DP05423 398 aaPredicted RBP16.55■□□□□ 0.24
ACTN1-205ENST00000538545 ZNF804AQ7Z570 1209 aa16.55■□□□□ 0.24
ACTN1-205ENST00000538545 ILDR1Q86SU0 546 aaPredicted RBP16.55■□□□□ 0.24
ACTN1-205ENST00000538545 NUP133Q8WUM0 1156 aa16.55■□□□□ 0.24
ACTN1-205ENST00000538545 CHRNA5P30532 468 aa16.54■□□□□ 0.24
ACTN1-205ENST00000538545 KRT85P78386 507 aa16.54■□□□□ 0.24
ACTN1-205ENST00000538545 FBXL16Q8N461 479 aa16.54■□□□□ 0.24
ACTN1-205ENST00000538545 RBSNQ9H1K0 784 aa16.54■□□□□ 0.24
ACTN1-205ENST00000538545 RTN4Q9NQC3 1192 aaKnown RBP16.54■□□□□ 0.24
ACTN1-205ENST00000538545 DYNLL2Q96FJ2 89 aa16.54■□□□□ 0.24
ACTN1-205ENST00000538545 KCNQ5Q9NR82 932 aa16.54■□□□□ 0.24
ACTN1-205ENST00000538545 CCDC88AQ3V6T2 1871 aa16.53■□□□□ 0.24
ACTN1-205ENST00000538545 hCG_1642624A0A1W2PR95 340 aa16.53■□□□□ 0.24
ACTN1-205ENST00000538545 ZBTB43O43298 467 aa16.53■□□□□ 0.24
ACTN1-205ENST00000538545 BBOX1O75936 387 aa16.53■□□□□ 0.24
ACTN1-205ENST00000538545 HOXA10P31260 410 aaPredicted RBP16.53■□□□□ 0.24
ACTN1-205ENST00000538545 GTF2IP78347 998 aa16.53■□□□□ 0.24
ACTN1-205ENST00000538545 MCM9Q9NXL9 1143 aa16.53■□□□□ 0.24
ACTN1-205ENST00000538545 PARP3Q9Y6F1 533 aa16.53■□□□□ 0.24
ACTN1-205ENST00000538545 GOLGA8AA7E2F4 631 aa16.53■□□□□ 0.24
ACTN1-205ENST00000538545 MBD3O95983 291 aa16.53■□□□□ 0.24
ACTN1-205ENST00000538545 LIG1P18858 919 aa16.53■□□□□ 0.24
ACTN1-205ENST00000538545 GUCY1A2P33402 732 aa16.53■□□□□ 0.24
ACTN1-205ENST00000538545 HMGN5P82970 282 aaKnown RBP16.53■□□□□ 0.24
ACTN1-205ENST00000538545 TMEM87AQ8NBN3 555 aa16.53■□□□□ 0.24
ACTN1-205ENST00000538545 SPATA32Q96LK8 384 aa16.53■□□□□ 0.24
ACTN1-205ENST00000538545 BRIP1Q9BX63 1249 aa16.53■□□□□ 0.24
ACTN1-205ENST00000538545 SAP30BPQ9UHR5 308 aaKnown RBP16.53■□□□□ 0.24
ACTN1-205ENST00000538545 SLC12A7Q9Y666 1083 aa16.53■□□□□ 0.24
ACTN1-205ENST00000538545 ZMYM6O95789 1325 aa16.53■□□□□ 0.24
ACTN1-205ENST00000538545 CCDC69A6NI79 296 aa16.52■□□□□ 0.24
ACTN1-205ENST00000538545 MFSD14BQ5SR56 506 aa16.52■□□□□ 0.24
ACTN1-205ENST00000538545 TGFBRAP1Q8WUH2 860 aa16.52■□□□□ 0.24
ACTN1-205ENST00000538545 TNKSO95271 1327 aa16.52■□□□□ 0.24
ACTN1-205ENST00000538545 KIF28PB7ZC32 967 aa16.52■□□□□ 0.23
ACTN1-205ENST00000538545 UBE2HP62256 183 aa16.52■□□□□ 0.23
ACTN1-205ENST00000538545 WTAPQ15007 396 aa16.52■□□□□ 0.23
ACTN1-205ENST00000538545 L1TD1Q5T7N2 865 aaKnown RBP16.52■□□□□ 0.23
ACTN1-205ENST00000538545 SLC44A5Q8NCS7 719 aa16.52■□□□□ 0.23
ACTN1-205ENST00000538545 LEO1Q8WVC0 666 aaPredicted RBP16.52■□□□□ 0.23
ACTN1-205ENST00000538545 C8orf76Q96K31 380 aa16.52■□□□□ 0.23
ACTN1-205ENST00000538545 TMEM87BQ96K49 555 aa16.52■□□□□ 0.23
ACTN1-205ENST00000538545 USP28Q96RU2 1077 aa16.52■□□□□ 0.23
ACTN1-205ENST00000538545 KRT23Q9C075 422 aa16.52■□□□□ 0.23
ACTN1-205ENST00000538545 KLRG2A4D1S0 409 aaPredicted RBP16.51■□□□□ 0.23
ACTN1-205ENST00000538545 ATP2B4P23634 1241 aa16.51■□□□□ 0.23
ACTN1-205ENST00000538545 CAMK4Q16566 473 aa16.51■□□□□ 0.23
ACTN1-205ENST00000538545 MAPKAPK5Q8IW41 473 aa16.51■□□□□ 0.23
ACTN1-205ENST00000538545 PGBD1Q96JS3 809 aa16.51■□□□□ 0.23
ACTN1-205ENST00000538545 MRE11P49959 708 aa16.51■□□□□ 0.23
ACTN1-205ENST00000538545 ZNF445P59923 1031 aa16.51■□□□□ 0.23
ACTN1-205ENST00000538545 GIMAP6Q6P9H5 292 aa16.51■□□□□ 0.23
ACTN1-205ENST00000538545 WDR66Q8TBY9 1149 aa16.51■□□□□ 0.23
ACTN1-205ENST00000538545 CRAMP1Q96RY5 1269 aa16.51■□□□□ 0.23
ACTN1-205ENST00000538545 CRNKL1Q9BZJ0 848 aaKnown RBP16.51■□□□□ 0.23
ACTN1-205ENST00000538545 USP5P45974 858 aa16.51■□□□□ 0.23
ACTN1-205ENST00000538545 NTRK3Q16288 839 aa16.51■□□□□ 0.23
ACTN1-205ENST00000538545 UBAC1Q9BSL1 405 aa16.51■□□□□ 0.23
ACTN1-205ENST00000538545 SLC26A6Q9BXS9 759 aa16.51■□□□□ 0.23
ACTN1-205ENST00000538545 CNNM2Q9H8M5 875 aa16.51■□□□□ 0.23
ACTN1-205ENST00000538545 ENAHQ8N8S7 591 aaPredicted RBP16.5■□□□□ 0.23
ACTN1-205ENST00000538545 MTMR7Q9Y216 660 aa16.5■□□□□ 0.23
ACTN1-205ENST00000538545 COL11A2P13942 1736 aaPredicted RBP16.5■□□□□ 0.23
ACTN1-205ENST00000538545 SGMS1Q86VZ5 419 aa16.5■□□□□ 0.23
ACTN1-205ENST00000538545 DBNDD1Q9H9R9 158 aa16.5■□□□□ 0.23
ACTN1-205ENST00000538545 TNS1Q9HBL0 1735 aaKnown RBP16.5■□□□□ 0.23
ACTN1-205ENST00000538545 ATP6V0A2Q9Y487 856 aa16.5■□□□□ 0.23
ACTN1-205ENST00000538545 SLURP2P0DP57 97 aa16.49■□□□□ 0.23
ACTN1-205ENST00000538545 PLCD1P51178 756 aa16.49■□□□□ 0.23
ACTN1-205ENST00000538545 PIBF1Q8WXW3 757 aa16.49■□□□□ 0.23
ACTN1-205ENST00000538545 ALG1Q9BT22 464 aa16.49■□□□□ 0.23
ACTN1-205ENST00000538545 WDR19Q8NEZ3 1342 aa16.49■□□□□ 0.23
ACTN1-205ENST00000538545 BTDP43251 543 aa16.49■□□□□ 0.23
ACTN1-205ENST00000538545 SLC15A2Q16348 729 aa16.49■□□□□ 0.23
ACTN1-205ENST00000538545 MPNDQ8N594 471 aa16.49■□□□□ 0.23
ACTN1-205ENST00000538545 TIAM2Q8IVF5 1701 aa16.49■□□□□ 0.23
ACTN1-205ENST00000538545 LIFRP42702 1097 aa16.48■□□□□ 0.23
ACTN1-205ENST00000538545 SCNN1DP51172 638 aa16.48■□□□□ 0.23
ACTN1-205ENST00000538545 SP8Q8IXZ3 490 aa16.48■□□□□ 0.23
ACTN1-205ENST00000538545 ZNF654Q8IZM8 581 aa16.48■□□□□ 0.23
ACTN1-205ENST00000538545 FBXO18Q8NFZ0 1043 aa16.48■□□□□ 0.23
ACTN1-205ENST00000538545 ESR2Q92731 530 aa16.48■□□□□ 0.23
ACTN1-205ENST00000538545 CAMKK2Q96RR4 588 aa16.48■□□□□ 0.23
ACTN1-205ENST00000538545 ERICH2A1L162 156 aa16.48■□□□□ 0.23
ACTN1-205ENST00000538545 DHX16O60231 1041 aaKnown RBP16.48■□□□□ 0.23
ACTN1-205ENST00000538545 IL1R1P14778 569 aa16.48■□□□□ 0.23
ACTN1-205ENST00000538545 SEC23AQ15436 765 aa16.48■□□□□ 0.23
ACTN1-205ENST00000538545 LRSAM1Q6UWE0 723 aa16.48■□□□□ 0.23
ACTN1-205ENST00000538545 C2CD5Q86YS7 1000 aa16.48■□□□□ 0.23
ACTN1-205ENST00000538545 CERS5Q8N5B7 392 aa16.48■□□□□ 0.23
ACTN1-205ENST00000538545 RTFDC1Q9BY42 306 aaPredicted RBP16.48■□□□□ 0.23
ACTN1-205ENST00000538545 RNF41Q9H4P4 317 aaPredicted RBP16.48■□□□□ 0.23
ACTN1-205ENST00000538545 PODXL2Q9NZ53 605 aa16.48■□□□□ 0.23
ACTN1-205ENST00000538545 NPR1P16066 1061 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms