RNA–Protein interactions for RNA: ENST00000538271.1

PRKAB1-204, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 4

Gene PRKAB1, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-204ENST00000538271 ZNF710Q8N1W2 664 aa12.58□□□□□ -0.4
PRKAB1-204ENST00000538271 RTF1Q92541 710 aaKnown RBP12.58□□□□□ -0.4
PRKAB1-204ENST00000538271 PI4K2BG5E9Z4 385 aa12.57□□□□□ -0.4
PRKAB1-204ENST00000538271 GTF2IP78347 998 aa12.57□□□□□ -0.4
PRKAB1-204ENST00000538271 TNFAIP1Q13829 316 aa12.57□□□□□ -0.4
PRKAB1-204ENST00000538271 DCTN1Q14203 1278 aa12.57□□□□□ -0.4
PRKAB1-204ENST00000538271 TAF7Q15545 349 aaPredicted RBP12.57□□□□□ -0.4
PRKAB1-204ENST00000538271 AAK1Q2M2I8 961 aa12.57□□□□□ -0.4
PRKAB1-204ENST00000538271 KCNH6Q9H252 994 aa12.57□□□□□ -0.4
PRKAB1-204ENST00000538271 PRDM12Q9H4Q4 367 aa12.57□□□□□ -0.4
PRKAB1-204ENST00000538271 MOGSQ13724 837 aa12.56□□□□□ -0.4
PRKAB1-204ENST00000538271 ADGRE1Q14246 886 aa12.56□□□□□ -0.4
PRKAB1-204ENST00000538271 PDIA6Q15084 440 aa12.56□□□□□ -0.4
PRKAB1-204ENST00000538271 ZKSCAN4Q969J2 545 aaPredicted RBP12.56□□□□□ -0.4
PRKAB1-204ENST00000538271 COA7Q96BR5 231 aa12.56□□□□□ -0.4
PRKAB1-204ENST00000538271 LARP6Q9BRS8 491 aaKnown RBP12.56□□□□□ -0.4
PRKAB1-204ENST00000538271 PANK3Q9H999 370 aa12.56□□□□□ -0.4
PRKAB1-204ENST00000538271 ARAP2Q8WZ64 1704 aa12.56□□□□□ -0.4
PRKAB1-204ENST00000538271 REV3LO60673 3130 aa12.55□□□□□ -0.4
PRKAB1-204ENST00000538271 KRT37O76014 449 aa12.55□□□□□ -0.4
PRKAB1-204ENST00000538271 HOXB3P14651 431 aaPredicted RBP12.55□□□□□ -0.4
PRKAB1-204ENST00000538271 PPATQ06203 517 aa12.55□□□□□ -0.4
PRKAB1-204ENST00000538271 E2F4Q16254 413 aa12.55□□□□□ -0.4
PRKAB1-204ENST00000538271 TXNRD3Q86VQ6 643 aa12.55□□□□□ -0.4
PRKAB1-204ENST00000538271 CERS5Q8N5B7 392 aa12.55□□□□□ -0.4
PRKAB1-204ENST00000538271 BADQ92934 168 aa12.55□□□□□ -0.4
PRKAB1-204ENST00000538271 TIFAQ96CG3 184 aa12.55□□□□□ -0.4
PRKAB1-204ENST00000538271 RNPC3Q96LT9 517 aaKnown RBP12.55□□□□□ -0.4
PRKAB1-204ENST00000538271 KRTAP3-3Q9BYR6 98 aa12.55□□□□□ -0.4
PRKAB1-204ENST00000538271 KRTAP3-2Q9BYR7 98 aa12.55□□□□□ -0.4
PRKAB1-204ENST00000538271 U2SURPO15042 1029 aaKnown RBP12.54□□□□□ -0.4
PRKAB1-204ENST00000538271 EIF4A1P60842 406 aaKnown RBP12.54□□□□□ -0.4
PRKAB1-204ENST00000538271 MFSD10Q14728 455 aa12.54□□□□□ -0.4
PRKAB1-204ENST00000538271 PROSER3Q2NL68 480 aa12.54□□□□□ -0.4
PRKAB1-204ENST00000538271 TPRNQ4KMQ1 711 aa12.54□□□□□ -0.4
PRKAB1-204ENST00000538271 RTL5Q5HYW3 569 aaPredicted RBP12.54□□□□□ -0.4
PRKAB1-204ENST00000538271 COPS6Q7L5N1 327 aa12.54□□□□□ -0.4
PRKAB1-204ENST00000538271 WRNIP1Q96S55 665 aa12.54□□□□□ -0.4
PRKAB1-204ENST00000538271 PHOX2BQ99453 314 aa12.54□□□□□ -0.4
PRKAB1-204ENST00000538271 POLR3GLQ9BT43 218 aa12.54□□□□□ -0.4
PRKAB1-204ENST00000538271 TMEM39BQ9GZU3 492 aa12.54□□□□□ -0.4
PRKAB1-204ENST00000538271 KCNH4Q9UQ05 1017 aa12.54□□□□□ -0.4
PRKAB1-204ENST00000538271 AK9Q5TCS8 1911 aa12.54□□□□□ -0.4
PRKAB1-204ENST00000538271 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.53□□□□□ -0.4
PRKAB1-204ENST00000538271 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.53□□□□□ -0.4
PRKAB1-204ENST00000538271 F8W031 263 aaPredicted RBP12.53□□□□□ -0.4
PRKAB1-204ENST00000538271 IRS4O14654 1257 aaPredicted RBP12.53□□□□□ -0.4
PRKAB1-204ENST00000538271 ANXA1P04083 346 aa12.53□□□□□ -0.4
PRKAB1-204ENST00000538271 IGFBP4P22692 258 aa12.53□□□□□ -0.4
PRKAB1-204ENST00000538271 GPAT2Q6NUI2 795 aa12.53□□□□□ -0.4
PRKAB1-204ENST00000538271 UIMC1Q96RL1 719 aa12.53□□□□□ -0.4
PRKAB1-204ENST00000538271 SENP6Q9GZR1 1112 aaPredicted RBP12.53□□□□□ -0.4
PRKAB1-204ENST00000538271 ZNF70Q9UC06 446 aaPredicted RBP12.53□□□□□ -0.4
PRKAB1-204ENST00000538271 ZNF318Q5VUA4 2279 aa12.53□□□□□ -0.4
PRKAB1-204ENST00000538271 C5orf42Q9H799 3197 aa12.52□□□□□ -0.41
PRKAB1-204ENST00000538271 AIMP1Q12904 312 aaKnown RBP12.52□□□□□ -0.41
PRKAB1-204ENST00000538271 MAP3K21Q5TCX8 1036 aa12.52□□□□□ -0.41
PRKAB1-204ENST00000538271 LRRC37A2A6NM11 1700 aa12.51□□□□□ -0.41
PRKAB1-204ENST00000538271 PRKAR2BP31323 418 aa12.51□□□□□ -0.41
PRKAB1-204ENST00000538271 CCT4P50991 539 aaKnown RBP12.51□□□□□ -0.41
PRKAB1-204ENST00000538271 RBM5P52756 815 aaKnown RBP eCLIP12.51□□□□□ -0.41
PRKAB1-204ENST00000538271 RTP1P59025 263 aa12.51□□□□□ -0.41
PRKAB1-204ENST00000538271 EPG5Q9HCE0 2579 aa12.51□□□□□ -0.41
PRKAB1-204ENST00000538271 CHD8Q9HCK8 2581 aa12.51□□□□□ -0.41
PRKAB1-204ENST00000538271 PLXNA1Q9UIW2 1896 aa12.51□□□□□ -0.41
PRKAB1-204ENST00000538271 PTPRZ1P23471 2315 aaPredicted RBP12.5□□□□□ -0.41
PRKAB1-204ENST00000538271 TCP10L2B9ZVM9 353 aa12.5□□□□□ -0.41
PRKAB1-204ENST00000538271 TLL1O43897 1013 aa12.5□□□□□ -0.41
PRKAB1-204ENST00000538271 HOXB1P14653 301 aaPredicted RBP12.5□□□□□ -0.41
PRKAB1-204ENST00000538271 ANKRD18AQ8IVF6 992 aa12.5□□□□□ -0.41
PRKAB1-204ENST00000538271 XAGE3Q8WTP9 111 aa12.5□□□□□ -0.41
PRKAB1-204ENST00000538271 TRIB2Q92519 343 aa12.5□□□□□ -0.41
PRKAB1-204ENST00000538271 COL26A1Q96A83 441 aa12.5□□□□□ -0.41
PRKAB1-204ENST00000538271 DDX27Q96GQ7 796 aaKnown RBP12.5□□□□□ -0.41
PRKAB1-204ENST00000538271 PRDM5Q9NQX1 630 aaPredicted RBP12.5□□□□□ -0.41
PRKAB1-204ENST00000538271 FRMPD3Q5JV73 1810 aa12.49□□□□□ -0.41
PRKAB1-204ENST00000538271 ERC2O15083 957 aa12.49□□□□□ -0.41
PRKAB1-204ENST00000538271 TMEM92Q6UXU6 159 aa12.49□□□□□ -0.41
PRKAB1-204ENST00000538271 PNISRQ8TF01 805 aaKnown RBP12.49□□□□□ -0.41
PRKAB1-204ENST00000538271 ISCA1Q9BUE6 129 aa12.49□□□□□ -0.41
PRKAB1-204ENST00000538271 TDRD3Q9H7E2 651 aaKnown RBP12.49□□□□□ -0.41
PRKAB1-204ENST00000538271 GJD2Q9UKL4 321 aa12.49□□□□□ -0.41
PRKAB1-204ENST00000538271 ATP11BQ9Y2G3 1177 aa12.49□□□□□ -0.41
PRKAB1-204ENST00000538271 CHD9Q3L8U1 2897 aa12.49□□□□□ -0.41
PRKAB1-204ENST00000538271 HTATSF1O43719 755 aaKnown RBP12.48□□□□□ -0.41
PRKAB1-204ENST00000538271 EIF2S2P20042 333 aaKnown RBP12.48□□□□□ -0.41
PRKAB1-204ENST00000538271 KLRK1P26718 216 aa12.48□□□□□ -0.41
PRKAB1-204ENST00000538271 EPHB4P54760 987 aa12.48□□□□□ -0.41
PRKAB1-204ENST00000538271 CCDC152Q4G0S7 254 aa12.48□□□□□ -0.41
PRKAB1-204ENST00000538271 ERMP1Q7Z2K6 904 aa12.48□□□□□ -0.41
PRKAB1-204ENST00000538271 CD320Q9NPF0 282 aa12.48□□□□□ -0.41
PRKAB1-204ENST00000538271 MINPP1Q9UNW1 487 aa12.48□□□□□ -0.41
PRKAB1-204ENST00000538271 PLXNB2O15031 1838 aa12.47□□□□□ -0.41
PRKAB1-204ENST00000538271 ATP5J2-PTCD1G3V325 749 aa12.47□□□□□ -0.41
PRKAB1-204ENST00000538271 ITGB8P26012 769 aa12.47□□□□□ -0.41
PRKAB1-204ENST00000538271 TNNI2P48788 182 aa12.47□□□□□ -0.41
PRKAB1-204ENST00000538271 CCDC85AQ96PX6 553 aaPredicted RBP12.47□□□□□ -0.41
PRKAB1-204ENST00000538271 RSPH6AQ9H0K4 717 aa12.47□□□□□ -0.41
PRKAB1-204ENST00000538271 KMT2BQ9UMN6 2715 aaPredicted RBP12.47□□□□□ -0.41
PRKAB1-204ENST00000538271 DCHS1Q96JQ0 3298 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms