RNA–Protein interactions for RNA: ENST00000538177.5

SLC28A1-204, Transcript of solute carrier family 28 member 1, humanhuman

TSL 2 BASIC

Gene SLC28A1, Length 2,155 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-204ENST00000538177 RCAN1P53805 252 aa13.28□□□□□ -0.28
SLC28A1-204ENST00000538177 SART3Q15020 963 aaKnown RBP13.28□□□□□ -0.28
SLC28A1-204ENST00000538177 KRT40Q6A162 431 aa13.28□□□□□ -0.28
SLC28A1-204ENST00000538177 VPS37DQ86XT2 251 aa13.28□□□□□ -0.28
SLC28A1-204ENST00000538177 FMR1NBQ8N0W7 255 aaPredicted RBP13.28□□□□□ -0.28
SLC28A1-204ENST00000538177 PHKBQ93100 1093 aa13.28□□□□□ -0.28
SLC28A1-204ENST00000538177 AIFM3Q96NN9 605 aa13.28□□□□□ -0.28
SLC28A1-204ENST00000538177 ANKRD2Q9GZV1 360 aa13.28□□□□□ -0.28
SLC28A1-204ENST00000538177 COL24A1Q17RW2 1714 aa13.28□□□□□ -0.28
SLC28A1-204ENST00000538177 IFNAR1P17181 557 aa13.27□□□□□ -0.28
SLC28A1-204ENST00000538177 ANO1Q5XXA6 986 aa13.27□□□□□ -0.28
SLC28A1-204ENST00000538177 ARHGEF1Q92888 912 aaKnown RBP13.27□□□□□ -0.28
SLC28A1-204ENST00000538177 MYL10Q9BUA6 226 aa13.27□□□□□ -0.28
SLC28A1-204ENST00000538177 NHSQ6T4R5 1651 aa13.27□□□□□ -0.29
SLC28A1-204ENST00000538177 CACNA1SQ13698 1873 aa13.27□□□□□ -0.29
SLC28A1-204ENST00000538177 CASZ1Q86V15 1759 aa13.27□□□□□ -0.29
SLC28A1-204ENST00000538177 FMNL1O95466 1100 aaPredicted RBP13.27□□□□□ -0.29
SLC28A1-204ENST00000538177 TM4SF1P30408 202 aa13.27□□□□□ -0.29
SLC28A1-204ENST00000538177 ZNF165P49910 485 aa13.27□□□□□ -0.29
SLC28A1-204ENST00000538177 PLCB2Q00722 1185 aa13.27□□□□□ -0.29
SLC28A1-204ENST00000538177 WTAPQ15007 396 aa13.27□□□□□ -0.29
SLC28A1-204ENST00000538177 SF3A1Q15459 793 aaKnown RBP13.27□□□□□ -0.29
SLC28A1-204ENST00000538177 RRP12Q5JTH9 1297 aaKnown RBP13.27□□□□□ -0.29
SLC28A1-204ENST00000538177 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.27□□□□□ -0.29
SLC28A1-204ENST00000538177 CCDC144CPQ8IYA2 1237 aa13.27□□□□□ -0.29
SLC28A1-204ENST00000538177 ZNF384Q8TF68 577 aa13.27□□□□□ -0.29
SLC28A1-204ENST00000538177 NAP1L5Q96NT1 182 aaPredicted RBP13.27□□□□□ -0.29
SLC28A1-204ENST00000538177 BRIP1Q9BX63 1249 aa13.27□□□□□ -0.29
SLC28A1-204ENST00000538177 U2AF2P26368 475 aaKnown RBP eCLIP13.26□□□□□ -0.29
SLC28A1-204ENST00000538177 SSRP1Q08945 709 aaKnown RBP13.26□□□□□ -0.29
SLC28A1-204ENST00000538177 SLC39A14Q15043 492 aa13.26□□□□□ -0.29
SLC28A1-204ENST00000538177 SDR42E1Q8WUS8 393 aa13.26□□□□□ -0.29
SLC28A1-204ENST00000538177 DNAJC25Q9H1X3 360 aa13.26□□□□□ -0.29
SLC28A1-204ENST00000538177 ERICH2A1L162 156 aa13.25□□□□□ -0.29
SLC28A1-204ENST00000538177 AXDND1Q5T1B0 1012 aaPredicted RBP13.25□□□□□ -0.29
SLC28A1-204ENST00000538177 AMIGO3Q86WK7 504 aa13.25□□□□□ -0.29
SLC28A1-204ENST00000538177 WASF1Q92558 559 aa13.25□□□□□ -0.29
SLC28A1-204ENST00000538177 TOMM22Q9NS69 142 aa13.25□□□□□ -0.29
SLC28A1-204ENST00000538177 TPM3P06753 285 aa13.25□□□□□ -0.29
SLC28A1-204ENST00000538177 KLRK1P26718 216 aa13.25□□□□□ -0.29
SLC28A1-204ENST00000538177 HIBADHP31937 336 aaKnown RBP13.25□□□□□ -0.29
SLC28A1-204ENST00000538177 TRIM29Q14134 588 aa13.25□□□□□ -0.29
SLC28A1-204ENST00000538177 IQCB1Q15051 598 aa13.25□□□□□ -0.29
SLC28A1-204ENST00000538177 STX1AQ16623 288 aa13.25□□□□□ -0.29
SLC28A1-204ENST00000538177 RTN1Q16799 776 aa13.25□□□□□ -0.29
SLC28A1-204ENST00000538177 TMED8Q6PL24 325 aaPredicted RBP13.25□□□□□ -0.29
SLC28A1-204ENST00000538177 ESR2Q92731 530 aa13.25□□□□□ -0.29
SLC28A1-204ENST00000538177 NSUN4Q96CB9 384 aaKnown RBP13.25□□□□□ -0.29
SLC28A1-204ENST00000538177 SLC26A6Q9BXS9 759 aa13.25□□□□□ -0.29
SLC28A1-204ENST00000538177 CCDC196A0A1B0GTZ2 297 aa13.24□□□□□ -0.29
SLC28A1-204ENST00000538177 A0A1B0GVL5 298 aa13.24□□□□□ -0.29
SLC28A1-204ENST00000538177 MINDY4BA8MYZ0 360 aa13.24□□□□□ -0.29
SLC28A1-204ENST00000538177 FGRP09769 529 aa13.24□□□□□ -0.29
SLC28A1-204ENST00000538177 PCP11498 1178 aaKnown RBP13.24□□□□□ -0.29
SLC28A1-204ENST00000538177 CMA1P23946 247 aa13.24□□□□□ -0.29
SLC28A1-204ENST00000538177 NDUFA8P51970 172 aa13.24□□□□□ -0.29
SLC28A1-204ENST00000538177 DYNLL1P63167 89 aaKnown RBP13.24□□□□□ -0.29
SLC28A1-204ENST00000538177 KIAA2012Q0VF49 1180 aa13.24□□□□□ -0.29
SLC28A1-204ENST00000538177 SEC23AQ15436 765 aa13.24□□□□□ -0.29
SLC28A1-204ENST00000538177 ZKSCAN3Q9BRR0 538 aa13.24□□□□□ -0.29
SLC28A1-204ENST00000538177 PPP2R5BQ15173 497 aa13.24□□□□□ -0.29
SLC28A1-204ENST00000538177 FAM182BQ5T319 152 aa13.24□□□□□ -0.29
SLC28A1-204ENST00000538177 NBPF11Q86T75 865 aa13.24□□□□□ -0.29
SLC28A1-204ENST00000538177 MPNDQ8N594 471 aa13.24□□□□□ -0.29
SLC28A1-204ENST00000538177 ZNF830Q96NB3 372 aaPredicted RBP13.24□□□□□ -0.29
SLC28A1-204ENST00000538177 UBAC1Q9BSL1 405 aa13.24□□□□□ -0.29
SLC28A1-204ENST00000538177 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.24□□□□□ -0.29
SLC28A1-204ENST00000538177 ANO10Q9NW15 660 aa13.24□□□□□ -0.29
SLC28A1-204ENST00000538177 IRS2Q9Y4H2 1338 aa13.23□□□□□ -0.29
SLC28A1-204ENST00000538177 PPP6R2O75170 966 aa13.23□□□□□ -0.29
SLC28A1-204ENST00000538177 PTPAQ15257 358 aa13.23□□□□□ -0.29
SLC28A1-204ENST00000538177 PLA2G4DQ86XP0 818 aa13.23□□□□□ -0.29
SLC28A1-204ENST00000538177 TRIM22Q8IYM9 498 aa13.23□□□□□ -0.29
SLC28A1-204ENST00000538177 ZNF654Q8IZM8 581 aa13.23□□□□□ -0.29
SLC28A1-204ENST00000538177 CCDC24Q8N4L8 307 aa13.23□□□□□ -0.29
SLC28A1-204ENST00000538177 CRACR2BQ8N4Y2 399 aaPredicted RBP13.23□□□□□ -0.29
SLC28A1-204ENST00000538177 FANCBQ8NB91 859 aa13.23□□□□□ -0.29
SLC28A1-204ENST00000538177 GJD4Q96KN9 370 aaPredicted RBP13.23□□□□□ -0.29
SLC28A1-204ENST00000538177 TTC12Q9H892 705 aaPredicted RBP13.23□□□□□ -0.29
SLC28A1-204ENST00000538177 GOLGA6L6A8MZA4 724 aa13.22□□□□□ -0.29
SLC28A1-204ENST00000538177 ONECUT3O60422 494 aaPredicted RBP13.22□□□□□ -0.29
SLC28A1-204ENST00000538177 RFC4P35249 363 aa13.22□□□□□ -0.29
SLC28A1-204ENST00000538177 MECOMQ03112 1051 aa13.22□□□□□ -0.29
SLC28A1-204ENST00000538177 TRAPPC3LQ5T215 181 aa13.22□□□□□ -0.29
SLC28A1-204ENST00000538177 C11orf57Q6ZUT1 292 aaPredicted RBP13.22□□□□□ -0.29
SLC28A1-204ENST00000538177 STK11IPQ8N1F8 1099 aa13.22□□□□□ -0.29
SLC28A1-204ENST00000538177 PIBF1Q8WXW3 757 aa13.22□□□□□ -0.29
SLC28A1-204ENST00000538177 MAP3K14Q99558 947 aa13.22□□□□□ -0.29
SLC28A1-204ENST00000538177 SDF4Q9BRK5 362 aa13.22□□□□□ -0.29
SLC28A1-204ENST00000538177 TFCP2L1Q9NZI6 479 aa13.22□□□□□ -0.29
SLC28A1-204ENST00000538177 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.22□□□□□ -0.29
SLC28A1-204ENST00000538177 LY75O60449 1722 aa13.22□□□□□ -0.29
SLC28A1-204ENST00000538177 UBE2Q2LH0YL09 131 aa13.22□□□□□ -0.29
SLC28A1-204ENST00000538177 SMIM22K7EJ46 135 aa13.22□□□□□ -0.29
SLC28A1-204ENST00000538177 WDHD1O75717 1129 aaPredicted RBP13.22□□□□□ -0.29
SLC28A1-204ENST00000538177 DEXIO95424 95 aa13.22□□□□□ -0.29
SLC28A1-204ENST00000538177 GUCY1A2P33402 732 aa13.22□□□□□ -0.29
SLC28A1-204ENST00000538177 ZNF75DP51815 510 aa13.22□□□□□ -0.29
SLC28A1-204ENST00000538177 TERF1P54274 439 aa13.22□□□□□ -0.29
SLC28A1-204ENST00000538177 GNL2Q13823 731 aaKnown RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms