RNA–Protein interactions for RNA: ENST00000538021.5

CLPB-208, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 1 (best)

Gene CLPB, Length 1,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-208ENST00000538021 SUCLG2Q96I99 432 aa14.04□□□□□ -0.16
CLPB-208ENST00000538021 C11orf49Q9H6J7 331 aa14.04□□□□□ -0.16
CLPB-208ENST00000538021 VAMP4O75379 141 aa14.03□□□□□ -0.16
CLPB-208ENST00000538021 PDE8BO95263 885 aa14.03□□□□□ -0.16
CLPB-208ENST00000538021 PTPRAP18433 802 aa14.03□□□□□ -0.16
CLPB-208ENST00000538021 DIXDC1Q155Q3 683 aa14.03□□□□□ -0.16
CLPB-208ENST00000538021 WWC1Q8IX03 1113 aa14.03□□□□□ -0.16
CLPB-208ENST00000538021 ZFPM1Q8IX07 1006 aa14.03□□□□□ -0.16
CLPB-208ENST00000538021 HMX1Q9NP08 348 aaPredicted RBP14.03□□□□□ -0.16
CLPB-208ENST00000538021 USP40Q9NVE5 1235 aa14.03□□□□□ -0.16
CLPB-208ENST00000538021 FAM198AQ9UFP1 575 aa14.03□□□□□ -0.16
CLPB-208ENST00000538021 SLC45A1Q9Y2W3 748 aa14.03□□□□□ -0.16
CLPB-208ENST00000538021 DAGLAQ9Y4D2 1042 aa14.03□□□□□ -0.16
CLPB-208ENST00000538021 AFG3L2Q9Y4W6 797 aa14.03□□□□□ -0.16
CLPB-208ENST00000538021 CACNA1FO60840 1977 aa14.02□□□□□ -0.16
CLPB-208ENST00000538021 RPTORQ8N122 1335 aa14.02□□□□□ -0.17
CLPB-208ENST00000538021 TRIM75PA6NK02 468 aa14.02□□□□□ -0.17
CLPB-208ENST00000538021 PHF20L1A8MW92 1017 aa14.02□□□□□ -0.17
CLPB-208ENST00000538021 HMGCRP04035 888 aa14.02□□□□□ -0.17
CLPB-208ENST00000538021 WDR66Q8TBY9 1149 aa14.02□□□□□ -0.17
CLPB-208ENST00000538021 KAZALD1Q96I82 304 aa14.02□□□□□ -0.17
CLPB-208ENST00000538021 SPINK5Q9NQ38 1064 aaPredicted RBP14.02□□□□□ -0.17
CLPB-208ENST00000538021 LRRFIP2Q9Y608 721 aaKnown RBP14.02□□□□□ -0.17
CLPB-208ENST00000538021 SPTBN5Q9NRC6 3674 aaKnown RBP14.02□□□□□ -0.17
CLPB-208ENST00000538021 DOCK3Q8IZD9 2030 aa14.02□□□□□ -0.17
CLPB-208ENST00000538021 FANCIQ9NVI1 1328 aa14.01□□□□□ -0.17
CLPB-208ENST00000538021 ALDH1L1O75891 902 aa14.01□□□□□ -0.17
CLPB-208ENST00000538021 IFIT1P09914 478 aaKnown RBP14.01□□□□□ -0.17
CLPB-208ENST00000538021 TRIM32Q13049 653 aa14.01□□□□□ -0.17
CLPB-208ENST00000538021 CCDC27Q2M243 656 aa14.01□□□□□ -0.17
CLPB-208ENST00000538021 ZSCAN29Q8IWY8 852 aaPredicted RBP14.01□□□□□ -0.17
CLPB-208ENST00000538021 FAM161BQ96MY7 647 aa14.01□□□□□ -0.17
CLPB-208ENST00000538021 SRCIN1Q9C0H9 1055 aa14.01□□□□□ -0.17
CLPB-208ENST00000538021 PRKRIP1Q9H875 184 aaPredicted RBP14.01□□□□□ -0.17
CLPB-208ENST00000538021 NBPF7P0C2Y1 421 aaPredicted RBP14□□□□□ -0.17
CLPB-208ENST00000538021 EXOSC9Q06265 439 aaKnown RBP14□□□□□ -0.17
CLPB-208ENST00000538021 FAM110CQ1W6H9 321 aa14□□□□□ -0.17
CLPB-208ENST00000538021 VGLL2Q8N8G2 317 aa14□□□□□ -0.17
CLPB-208ENST00000538021 BICC1Q9H694 974 aaKnown RBP14□□□□□ -0.17
CLPB-208ENST00000538021 PNMA3Q9UL41 463 aa14□□□□□ -0.17
CLPB-208ENST00000538021 AGTPBP1Q9UPW5 1226 aa14□□□□□ -0.17
CLPB-208ENST00000538021 DDX60LQ5H9U9 1706 aaKnown RBP14□□□□□ -0.17
CLPB-208ENST00000538021 IL16Q14005 1332 aa13.99□□□□□ -0.17
CLPB-208ENST00000538021 SLURP2P0DP57 97 aa13.99□□□□□ -0.17
CLPB-208ENST00000538021 PRDX5P30044 214 aa13.99□□□□□ -0.17
CLPB-208ENST00000538021 RGS3P49796 1198 aa13.99□□□□□ -0.17
CLPB-208ENST00000538021 MDM2Q00987 491 aaPredicted RBP13.99□□□□□ -0.17
CLPB-208ENST00000538021 PUM3Q15397 648 aaKnown RBP13.99□□□□□ -0.17
CLPB-208ENST00000538021 TREML2Q5T2D2 321 aa13.99□□□□□ -0.17
CLPB-208ENST00000538021 CCDC84Q86UT8 332 aaPredicted RBP13.99□□□□□ -0.17
CLPB-208ENST00000538021 KLHDC4Q8TBB5 520 aa13.99□□□□□ -0.17
CLPB-208ENST00000538021 GUCD1Q96NT3 240 aa13.99□□□□□ -0.17
CLPB-208ENST00000538021 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.99□□□□□ -0.17
CLPB-208ENST00000538021 PRUNE2Q8WUY3 3088 aa13.98□□□□□ -0.17
CLPB-208ENST00000538021 LDHBP07195 334 aaKnown RBP13.98□□□□□ -0.17
CLPB-208ENST00000538021 OGDHLQ9ULD0 1010 aa13.98□□□□□ -0.17
CLPB-208ENST00000538021 ATRNL1Q5VV63 1379 aa13.97□□□□□ -0.17
CLPB-208ENST00000538021 PFASO15067 1338 aa13.97□□□□□ -0.17
CLPB-208ENST00000538021 KIF16BQ96L93 1317 aa13.97□□□□□ -0.17
CLPB-208ENST00000538021 POTEB2H3BUK9 544 aa13.97□□□□□ -0.17
CLPB-208ENST00000538021 SLC5A1P13866 664 aa13.97□□□□□ -0.17
CLPB-208ENST00000538021 CYP2B6P20813 491 aa13.97□□□□□ -0.17
CLPB-208ENST00000538021 FGFR2P21802 821 aa13.97□□□□□ -0.17
CLPB-208ENST00000538021 RABL6Q3YEC7 729 aaPredicted RBP13.97□□□□□ -0.17
CLPB-208ENST00000538021 TRIB2Q92519 343 aa13.97□□□□□ -0.17
CLPB-208ENST00000538021 GJD2Q9UKL4 321 aa13.97□□□□□ -0.17
CLPB-208ENST00000538021 DNAH12Q6ZR08 3092 aa13.97□□□□□ -0.17
CLPB-208ENST00000538021 DOCK2Q92608 1830 aa13.97□□□□□ -0.17
CLPB-208ENST00000538021 PTPRFP10586 1907 aa13.96□□□□□ -0.17
CLPB-208ENST00000538021 MYH13Q9UKX3 1938 aa13.96□□□□□ -0.17
CLPB-208ENST00000538021 CTNND1O60716 968 aaKnown RBP13.96□□□□□ -0.17
CLPB-208ENST00000538021 ENTPD3O75355 529 aa13.96□□□□□ -0.17
CLPB-208ENST00000538021 PRKAR2AP13861 404 aaKnown RBP13.96□□□□□ -0.17
CLPB-208ENST00000538021 GCLCP48506 637 aaPredicted RBP13.96□□□□□ -0.17
CLPB-208ENST00000538021 SH3BP5LQ7L8J4 393 aa13.96□□□□□ -0.17
CLPB-208ENST00000538021 ANKRD44Q8N8A2 993 aa13.96□□□□□ -0.17
CLPB-208ENST00000538021 SALL2Q9Y467 1007 aaPredicted RBP13.96□□□□□ -0.17
CLPB-208ENST00000538021 DDTLA6NHG4 134 aaPredicted RBP13.95□□□□□ -0.18
CLPB-208ENST00000538021 PICALMQ13492 652 aa13.95□□□□□ -0.18
CLPB-208ENST00000538021 ZNF697Q5TEC3 545 aa13.95□□□□□ -0.18
CLPB-208ENST00000538021 FAM109BQ6ICB4 259 aaPredicted RBP13.95□□□□□ -0.18
CLPB-208ENST00000538021 LPIN2Q92539 896 aa13.95□□□□□ -0.18
CLPB-208ENST00000538021 IDI2Q9BXS1 227 aa13.95□□□□□ -0.18
CLPB-208ENST00000538021 PRDM6Q9NQX0 595 aa13.95□□□□□ -0.18
CLPB-208ENST00000538021 MAP3K10Q02779 954 aa13.94□□□□□ -0.18
CLPB-208ENST00000538021 SPP2Q13103 211 aa13.94□□□□□ -0.18
CLPB-208ENST00000538021 PABPC4Q13310 644 aaKnown RBP eCLIP13.94□□□□□ -0.18
CLPB-208ENST00000538021 DOCK1Q14185 1865 aa13.94□□□□□ -0.18
CLPB-208ENST00000538021 LRRC26Q2I0M4 334 aa13.94□□□□□ -0.18
CLPB-208ENST00000538021 PROCA1Q8NCQ7 364 aaPredicted RBP13.94□□□□□ -0.18
CLPB-208ENST00000538021 LBHD1Q9BQE6 289 aaPredicted RBP13.94□□□□□ -0.18
CLPB-208ENST00000538021 GNL3LQ9NVN8 582 aaKnown RBP13.94□□□□□ -0.18
CLPB-208ENST00000538021 PHIPQ8WWQ0 1821 aa13.94□□□□□ -0.18
CLPB-208ENST00000538021 UTYO14607 1347 aa13.93□□□□□ -0.18
CLPB-208ENST00000538021 CDH23Q9H251 3354 aa13.93□□□□□ -0.18
CLPB-208ENST00000538021 HMGCS2P54868 508 aa13.93□□□□□ -0.18
CLPB-208ENST00000538021 MAP3K21Q5TCX8 1036 aa13.93□□□□□ -0.18
CLPB-208ENST00000538021 FAM196BA6NMK8 535 aa13.92□□□□□ -0.18
CLPB-208ENST00000538021 EYA2O00167 538 aa13.92□□□□□ -0.18
CLPB-208ENST00000538021 COL6A1P12109 1028 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms