RNA–Protein interactions for RNA: ENST00000537842.5

TNFRSF1A-210, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 404 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-210ENST00000537842 PXDNQ92626 1479 aa3.54□□□□□ -1.84
TNFRSF1A-210ENST00000537842 ROCK2O75116 1388 aaKnown RBP3.54□□□□□ -1.84
TNFRSF1A-210ENST00000537842 PNPLA6Q8IY17 1366 aa3.54□□□□□ -1.84
TNFRSF1A-210ENST00000537842 ACEP12821 1306 aa3.54□□□□□ -1.84
TNFRSF1A-210ENST00000537842 SPATA31A3Q5VYP0 1347 aa3.54□□□□□ -1.84
TNFRSF1A-210ENST00000537842 LOC102724428A0A0B4J2F2 783 aa3.54□□□□□ -1.84
TNFRSF1A-210ENST00000537842 FAM83GA6ND36 823 aa3.54□□□□□ -1.84
TNFRSF1A-210ENST00000537842 ZBTB42B2RXF5 422 aa3.54□□□□□ -1.84
TNFRSF1A-210ENST00000537842 LILRB5O75023 590 aa3.54□□□□□ -1.84
TNFRSF1A-210ENST00000537842 GADD45BO75293 160 aaPredicted RBP3.54□□□□□ -1.84
TNFRSF1A-210ENST00000537842 SMNDC1O75940 238 aaKnown RBP eCLIP3.54□□□□□ -1.84
TNFRSF1A-210ENST00000537842 MAP3K6O95382 1288 aa3.54□□□□□ -1.84
TNFRSF1A-210ENST00000537842 EGFRP00533 1210 aa3.54□□□□□ -1.84
TNFRSF1A-210ENST00000537842 FBLN1P23142 703 aa3.54□□□□□ -1.84
TNFRSF1A-210ENST00000537842 SIK1P57059 783 aa3.54□□□□□ -1.84
TNFRSF1A-210ENST00000537842 ECM1Q16610 540 aa3.54□□□□□ -1.84
TNFRSF1A-210ENST00000537842 NUTM2GQ5VZR2 741 aa3.54□□□□□ -1.84
TNFRSF1A-210ENST00000537842 LRRC59Q96AG4 307 aaKnown RBP3.54□□□□□ -1.84
TNFRSF1A-210ENST00000537842 HHIPQ96QV1 700 aa3.54□□□□□ -1.84
TNFRSF1A-210ENST00000537842 SETDB2Q96T68 719 aa3.54□□□□□ -1.84
TNFRSF1A-210ENST00000537842 LPIN3Q9BQK8 851 aa3.54□□□□□ -1.84
TNFRSF1A-210ENST00000537842 RASSF4Q9H2L5 321 aa3.54□□□□□ -1.84
TNFRSF1A-210ENST00000537842 NPHS2Q9NP85 383 aa3.54□□□□□ -1.84
TNFRSF1A-210ENST00000537842 MKL2Q9ULH7 1088 aa3.54□□□□□ -1.84
TNFRSF1A-210ENST00000537842 USP32Q8NFA0 1604 aa3.54□□□□□ -1.84
TNFRSF1A-210ENST00000537842 SSH2Q76I76 1423 aa3.53□□□□□ -1.84
TNFRSF1A-210ENST00000537842 TONSLQ96HA7 1378 aa3.53□□□□□ -1.84
TNFRSF1A-210ENST00000537842 JCADQ9P266 1359 aa3.53□□□□□ -1.84
TNFRSF1A-210ENST00000537842 DISP3Q9P2K9 1392 aa3.53□□□□□ -1.84
TNFRSF1A-210ENST00000537842 COL16A1Q07092 1604 aaPredicted RBP3.53□□□□□ -1.84
TNFRSF1A-210ENST00000537842 AHDC1Q5TGY3 1603 aaPredicted RBP3.53□□□□□ -1.84
TNFRSF1A-210ENST00000537842 ADARB2-AS1A8MUL3 147 aa3.53□□□□□ -1.84
TNFRSF1A-210ENST00000537842 EIF1AYO14602 144 aaKnown RBP3.53□□□□□ -1.84
TNFRSF1A-210ENST00000537842 CPNE3O75131 537 aaKnown RBP3.53□□□□□ -1.84
TNFRSF1A-210ENST00000537842 ARHGEF15O94989 841 aa3.53□□□□□ -1.84
TNFRSF1A-210ENST00000537842 LORP23490 312 aaPredicted RBP3.53□□□□□ -1.84
TNFRSF1A-210ENST00000537842 SOX18P35713 384 aa3.53□□□□□ -1.84
TNFRSF1A-210ENST00000537842 DGKGP49619 791 aa3.53□□□□□ -1.84
TNFRSF1A-210ENST00000537842 PCSK7Q16549 785 aa3.53□□□□□ -1.84
TNFRSF1A-210ENST00000537842 TRAPPC3LQ5T215 181 aa3.53□□□□□ -1.84
TNFRSF1A-210ENST00000537842 PI16Q6UXB8 463 aa3.53□□□□□ -1.84
TNFRSF1A-210ENST00000537842 WFDC8Q8IUA0 241 aa3.53□□□□□ -1.84
TNFRSF1A-210ENST00000537842 NPAS4Q8IUM7 802 aa3.53□□□□□ -1.84
TNFRSF1A-210ENST00000537842 TRPM4Q8TD43 1214 aa3.53□□□□□ -1.84
TNFRSF1A-210ENST00000537842 SLC7A3Q8WY07 619 aa3.53□□□□□ -1.84
TNFRSF1A-210ENST00000537842 FAM129BQ96TA1 746 aa3.53□□□□□ -1.84
TNFRSF1A-210ENST00000537842 ZKSCAN3Q9BRR0 538 aa3.53□□□□□ -1.84
TNFRSF1A-210ENST00000537842 CARD10Q9BWT7 1032 aa3.53□□□□□ -1.84
TNFRSF1A-210ENST00000537842 CHRDQ9H2X0 955 aa3.53□□□□□ -1.84
TNFRSF1A-210ENST00000537842 STK17AQ9UEE5 414 aa3.53□□□□□ -1.84
TNFRSF1A-210ENST00000537842 STARD13Q9Y3M8 1113 aa3.53□□□□□ -1.84
TNFRSF1A-210ENST00000537842 TULP4Q9NRJ4 1543 aa3.53□□□□□ -1.84
TNFRSF1A-210ENST00000537842 ATP7BP35670 1465 aa3.53□□□□□ -1.84
TNFRSF1A-210ENST00000537842 CD163L1Q9NR16 1453 aa3.53□□□□□ -1.84
TNFRSF1A-210ENST00000537842 POLR3AO14802 1390 aaPredicted RBP3.52□□□□□ -1.85
TNFRSF1A-210ENST00000537842 TRPM1Q7Z4N2 1603 aa3.52□□□□□ -1.85
TNFRSF1A-210ENST00000537842 NPHP3Q7Z494 1330 aa3.52□□□□□ -1.85
TNFRSF1A-210ENST00000537842 CLSPNQ9HAW4 1339 aa3.52□□□□□ -1.85
TNFRSF1A-210ENST00000537842 ANKRD33BA6NCL7 494 aa3.52□□□□□ -1.85
TNFRSF1A-210ENST00000537842 METTL12A8MUP2 240 aa3.52□□□□□ -1.85
TNFRSF1A-210ENST00000537842 RNF225M0QZC1 329 aaPredicted RBP3.52□□□□□ -1.85
TNFRSF1A-210ENST00000537842 GNB5O14775 395 aa3.52□□□□□ -1.85
TNFRSF1A-210ENST00000537842 NEFLP07196 543 aa3.52□□□□□ -1.85
TNFRSF1A-210ENST00000537842 P4HBP07237 508 aaKnown RBP3.52□□□□□ -1.85
TNFRSF1A-210ENST00000537842 HSPA5P11021 654 aaKnown RBP3.52□□□□□ -1.85
TNFRSF1A-210ENST00000537842 EDN3P14138 238 aa3.52□□□□□ -1.85
TNFRSF1A-210ENST00000537842 ZNF16P17020 682 aaPredicted RBP3.52□□□□□ -1.85
TNFRSF1A-210ENST00000537842 ATP2B2Q01814 1243 aa3.52□□□□□ -1.85
TNFRSF1A-210ENST00000537842 KANK3Q6NY19 840 aa3.52□□□□□ -1.85
TNFRSF1A-210ENST00000537842 DMRTC2Q8IXT2 367 aaPredicted RBP3.52□□□□□ -1.85
TNFRSF1A-210ENST00000537842 IL22RA1Q8N6P7 574 aa3.52□□□□□ -1.85
TNFRSF1A-210ENST00000537842 NGDNQ8NEJ9 315 aaKnown RBP3.52□□□□□ -1.85
TNFRSF1A-210ENST00000537842 SCARF2Q96GP6 870 aaPredicted RBP3.52□□□□□ -1.85
TNFRSF1A-210ENST00000537842 DMRTB1Q96MA1 342 aa3.52□□□□□ -1.85
TNFRSF1A-210ENST00000537842 C8orf37Q96NL8 207 aa3.52□□□□□ -1.85
TNFRSF1A-210ENST00000537842 ASB16Q96NS5 453 aa3.52□□□□□ -1.85
TNFRSF1A-210ENST00000537842 OSMRQ99650 979 aa3.52□□□□□ -1.85
TNFRSF1A-210ENST00000537842 PLVAPQ9BX97 442 aa3.52□□□□□ -1.85
TNFRSF1A-210ENST00000537842 BCL2L13Q9BXK5 485 aa3.52□□□□□ -1.85
TNFRSF1A-210ENST00000537842 RBCK1Q9BYM8 510 aa3.52□□□□□ -1.85
TNFRSF1A-210ENST00000537842 EHD4Q9H223 541 aa3.52□□□□□ -1.85
TNFRSF1A-210ENST00000537842 SUV39H2Q9H5I1 410 aa3.52□□□□□ -1.85
TNFRSF1A-210ENST00000537842 EFCC1Q9HA90 598 aa3.52□□□□□ -1.85
TNFRSF1A-210ENST00000537842 IGSF5Q9NSI5 407 aa3.52□□□□□ -1.85
TNFRSF1A-210ENST00000537842 KIAA1522Q9P206 1035 aaPredicted RBP3.52□□□□□ -1.85
TNFRSF1A-210ENST00000537842 WWC3Q9ULE0 1092 aa3.52□□□□□ -1.85
TNFRSF1A-210ENST00000537842 RGPD8O14715 1765 aaPredicted RBP3.52□□□□□ -1.85
TNFRSF1A-210ENST00000537842 BCL9LQ86UU0 1499 aa3.52□□□□□ -1.85
TNFRSF1A-210ENST00000537842 RALGAPBQ86X10 1494 aa3.52□□□□□ -1.85
TNFRSF1A-210ENST00000537842 CPSF1Q10570 1443 aaKnown RBP3.52□□□□□ -1.85
TNFRSF1A-210ENST00000537842 LAMC1P11047 1609 aa3.52□□□□□ -1.85
TNFRSF1A-210ENST00000537842 SBNO1A3KN83 1393 aa3.51□□□□□ -1.85
TNFRSF1A-210ENST00000537842 MED1Q15648 1581 aaPredicted RBP3.51□□□□□ -1.85
TNFRSF1A-210ENST00000537842 CDC42BPGQ6DT37 1551 aa3.51□□□□□ -1.85
TNFRSF1A-210ENST00000537842 AFF2P51816 1311 aa3.51□□□□□ -1.85
TNFRSF1A-210ENST00000537842 SPATA31A6Q5VVP1 1343 aa3.51□□□□□ -1.85
TNFRSF1A-210ENST00000537842 TTC21BQ7Z4L5 1316 aa3.51□□□□□ -1.85
TNFRSF1A-210ENST00000537842 KNDC1Q76NI1 1749 aa3.51□□□□□ -1.85
TNFRSF1A-210ENST00000537842 ARHGEF28Q8N1W1 1705 aaKnown RBP3.51□□□□□ -1.85
TNFRSF1A-210ENST00000537842 PTPRAP18433 802 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms