RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.53■□□□□ 0.24
USP44-203ENST00000537435 FAM237AA0A1B0GTK4 181 aa16.53■□□□□ 0.24
USP44-203ENST00000537435 IL6STP40189 918 aaPredicted RBP16.53■□□□□ 0.24
USP44-203ENST00000537435 FANCCQ00597 558 aa16.53■□□□□ 0.24
USP44-203ENST00000537435 RESP18Q5W5W9 173 aa16.53■□□□□ 0.24
USP44-203ENST00000537435 SFPQP23246 707 aaKnown RBP eCLIP16.53■□□□□ 0.24
USP44-203ENST00000537435 PNOCQ13519 176 aa16.53■□□□□ 0.24
USP44-203ENST00000537435 AKNAD1Q5T1N1 836 aa16.53■□□□□ 0.24
USP44-203ENST00000537435 HSD3B7Q9H2F3 369 aa16.53■□□□□ 0.24
USP44-203ENST00000537435 MYH3P11055 1940 aa16.52■□□□□ 0.24
USP44-203ENST00000537435 ZNF335Q9H4Z2 1342 aaPredicted RBP16.52■□□□□ 0.24
USP44-203ENST00000537435 STK36Q9NRP7 1315 aa16.52■□□□□ 0.24
USP44-203ENST00000537435 SPDYE4A6NLX3 237 aa16.52■□□□□ 0.24
USP44-203ENST00000537435 GSG1L2A8MUP6 293 aa16.52■□□□□ 0.24
USP44-203ENST00000537435 ATP1A3P13637 1013 aa16.52■□□□□ 0.24
USP44-203ENST00000537435 E4F1Q66K89 784 aaPredicted RBP16.52■□□□□ 0.24
USP44-203ENST00000537435 BCL11BQ9C0K0 894 aaPredicted RBP16.52■□□□□ 0.24
USP44-203ENST00000537435 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.52■□□□□ 0.24
USP44-203ENST00000537435 ITGB4P16144 1822 aa16.52■□□□□ 0.24
USP44-203ENST00000537435 PRKAB2O43741 272 aa16.52■□□□□ 0.23
USP44-203ENST00000537435 CUTAO60888 179 aa16.52■□□□□ 0.23
USP44-203ENST00000537435 FMNL1O95466 1100 aaPredicted RBP16.52■□□□□ 0.23
USP44-203ENST00000537435 MPHOSPH8Q99549 860 aa16.52■□□□□ 0.23
USP44-203ENST00000537435 CNNM2Q9H8M5 875 aa16.52■□□□□ 0.23
USP44-203ENST00000537435 ANKRD36CQ5JPF3 1778 aa16.51■□□□□ 0.23
USP44-203ENST00000537435 RRP12Q5JTH9 1297 aaKnown RBP16.51■□□□□ 0.23
USP44-203ENST00000537435 SUSD4Q5VX71 490 aa16.51■□□□□ 0.23
USP44-203ENST00000537435 MFSD6Q6ZSS7 791 aa16.51■□□□□ 0.23
USP44-203ENST00000537435 METTL16Q86W50 562 aaKnown RBP16.51■□□□□ 0.23
USP44-203ENST00000537435 KIF18AQ8NI77 898 aa16.51■□□□□ 0.23
USP44-203ENST00000537435 KRT23Q9C075 422 aa16.51■□□□□ 0.23
USP44-203ENST00000537435 SEC31BQ9NQW1 1179 aa16.51■□□□□ 0.23
USP44-203ENST00000537435 LRP5O75197 1615 aa16.51■□□□□ 0.23
USP44-203ENST00000537435 IFNAR1P17181 557 aa16.51■□□□□ 0.23
USP44-203ENST00000537435 GUCY1A2P33402 732 aa16.51■□□□□ 0.23
USP44-203ENST00000537435 LONRF3Q496Y0 759 aa16.51■□□□□ 0.23
USP44-203ENST00000537435 ZKSCAN3Q9BRR0 538 aa16.51■□□□□ 0.23
USP44-203ENST00000537435 TOMM22Q9NS69 142 aa16.51■□□□□ 0.23
USP44-203ENST00000537435 ZNF215Q9UL58 517 aaPredicted RBP16.51■□□□□ 0.23
USP44-203ENST00000537435 KCNH3Q9ULD8 1083 aa16.51■□□□□ 0.23
USP44-203ENST00000537435 DISP2A7MBM2 1401 aa16.5■□□□□ 0.23
USP44-203ENST00000537435 BTBD18B2RXH4 712 aa16.5■□□□□ 0.23
USP44-203ENST00000537435 TDO2P48775 406 aa16.5■□□□□ 0.23
USP44-203ENST00000537435 MYL5Q02045 173 aa16.5■□□□□ 0.23
USP44-203ENST00000537435 NOSTRINQ8IVI9 506 aa16.5■□□□□ 0.23
USP44-203ENST00000537435 LCORLQ8N3X6 602 aa16.5■□□□□ 0.23
USP44-203ENST00000537435 CNNM3Q8NE01 707 aa16.5■□□□□ 0.23
USP44-203ENST00000537435 WASF1Q92558 559 aa16.5■□□□□ 0.23
USP44-203ENST00000537435 SLIT2O94813 1529 aa16.5■□□□□ 0.23
USP44-203ENST00000537435 KIF2AO00139 706 aaPredicted RBP16.5■□□□□ 0.23
USP44-203ENST00000537435 KRBA2Q6ZNG9 492 aa16.5■□□□□ 0.23
USP44-203ENST00000537435 STK11IPQ8N1F8 1099 aa16.5■□□□□ 0.23
USP44-203ENST00000537435 PPP1R13BQ96KQ4 1090 aa16.5■□□□□ 0.23
USP44-203ENST00000537435 AK7Q96M32 723 aa16.5■□□□□ 0.23
USP44-203ENST00000537435 CGNQ9P2M7 1197 aaKnown RBP16.5■□□□□ 0.23
USP44-203ENST00000537435 SLC4A4Q9Y6R1 1079 aa16.5■□□□□ 0.23
USP44-203ENST00000537435 NUP98P52948 1817 aa16.49■□□□□ 0.23
USP44-203ENST00000537435 PSDA5PKW4 1024 aaPredicted RBP16.49■□□□□ 0.23
USP44-203ENST00000537435 NRDCO43847 1150 aa16.49■□□□□ 0.23
USP44-203ENST00000537435 UBASH3AP57075 661 aa16.49■□□□□ 0.23
USP44-203ENST00000537435 DHX8Q14562 1220 aaKnown RBP16.49■□□□□ 0.23
USP44-203ENST00000537435 RTN1Q16799 776 aa16.49■□□□□ 0.23
USP44-203ENST00000537435 SPECC1Q5M775 1068 aa16.49■□□□□ 0.23
USP44-203ENST00000537435 FOXP4Q8IVH2 680 aaPredicted RBP16.49■□□□□ 0.23
USP44-203ENST00000537435 KRI1Q8N9T8 703 aaKnown RBP16.49■□□□□ 0.23
USP44-203ENST00000537435 STAG1Q8WVM7 1258 aa16.49■□□□□ 0.23
USP44-203ENST00000537435 DPF2Q92785 391 aa16.49■□□□□ 0.23
USP44-203ENST00000537435 KCNJ14Q9UNX9 436 aa16.49■□□□□ 0.23
USP44-203ENST00000537435 EXOC5O00471 708 aa16.48■□□□□ 0.23
USP44-203ENST00000537435 SERPINC1P01008 464 aa16.48■□□□□ 0.23
USP44-203ENST00000537435 MMP1P03956 469 aa16.48■□□□□ 0.23
USP44-203ENST00000537435 BCAMP50895 628 aa16.48■□□□□ 0.23
USP44-203ENST00000537435 WTAPQ15007 396 aa16.48■□□□□ 0.23
USP44-203ENST00000537435 SAFBQ15424 915 aaKnown RBP eCLIP16.48■□□□□ 0.23
USP44-203ENST00000537435 OLFM4Q6UX06 510 aa16.48■□□□□ 0.23
USP44-203ENST00000537435 DIS3L2Q8IYB7 885 aaKnown RBP16.48■□□□□ 0.23
USP44-203ENST00000537435 NACAP1Q9BZK3 213 aa16.48■□□□□ 0.23
USP44-203ENST00000537435 PCDHA5Q9Y5H7 936 aa16.48■□□□□ 0.23
USP44-203ENST00000537435 KAT6BQ8WYB5 2073 aa16.48■□□□□ 0.23
USP44-203ENST00000537435 GNAT2P19087 354 aa16.48■□□□□ 0.23
USP44-203ENST00000537435 KCNJ6P48051 423 aa16.48■□□□□ 0.23
USP44-203ENST00000537435 SART3Q15020 963 aaKnown RBP16.48■□□□□ 0.23
USP44-203ENST00000537435 TRIM22Q8IYM9 498 aa16.48■□□□□ 0.23
USP44-203ENST00000537435 CCDC82Q8N4S0 544 aa16.48■□□□□ 0.23
USP44-203ENST00000537435 FEZ1Q99689 392 aa16.48■□□□□ 0.23
USP44-203ENST00000537435 NID2Q14112 1375 aa16.48■□□□□ 0.23
USP44-203ENST00000537435 FOXN1O15353 648 aa16.47■□□□□ 0.23
USP44-203ENST00000537435 TOB1P50616 345 aaPredicted RBP16.47■□□□□ 0.23
USP44-203ENST00000537435 EIF5P55010 431 aaKnown RBP16.47■□□□□ 0.23
USP44-203ENST00000537435 MIGA1Q8NAN2 632 aa16.47■□□□□ 0.23
USP44-203ENST00000537435 UTP14AQ9BVJ6 771 aaKnown RBP16.47■□□□□ 0.23
USP44-203ENST00000537435 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.47■□□□□ 0.23
USP44-203ENST00000537435 V9GYY5 206 aaPredicted RBP16.47■□□□□ 0.23
USP44-203ENST00000537435 PNPLA7Q6ZV29 1317 aa16.47■□□□□ 0.23
USP44-203ENST00000537435 CBFA2T2O43439 604 aa16.47■□□□□ 0.23
USP44-203ENST00000537435 CFAP100Q494V2 611 aa16.47■□□□□ 0.23
USP44-203ENST00000537435 CMTR1Q8N1G2 835 aaKnown RBP16.47■□□□□ 0.23
USP44-203ENST00000537435 ERO1AQ96HE7 468 aa16.47■□□□□ 0.23
USP44-203ENST00000537435 ECM29Q5VYK3 1845 aa16.47■□□□□ 0.23
USP44-203ENST00000537435 ERICH2A1L162 156 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms