RNA–Protein interactions for RNA: ENST00000537162.5

CPSF7-217, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-217ENST00000537162 PRRT2Q7Z6L0 340 aaPredicted RBP12.37□□□□□ -0.43
CPSF7-217ENST00000537162 DAGLAQ9Y4D2 1042 aa12.37□□□□□ -0.43
CPSF7-217ENST00000537162 CFAP54Q96N23 3096 aa12.36□□□□□ -0.43
CPSF7-217ENST00000537162 CXCL11O14625 94 aa12.36□□□□□ -0.43
CPSF7-217ENST00000537162 CHRNDQ07001 517 aa12.36□□□□□ -0.43
CPSF7-217ENST00000537162 CFAP53Q96M91 514 aa12.36□□□□□ -0.43
CPSF7-217ENST00000537162 FBXL18Q96ME1 805 aa12.36□□□□□ -0.43
CPSF7-217ENST00000537162 ANKRD2Q9GZV1 360 aa12.36□□□□□ -0.43
CPSF7-217ENST00000537162 GRXCR1A8MXD5 290 aa12.35□□□□□ -0.43
CPSF7-217ENST00000537162 NFE2L2Q16236 605 aa12.35□□□□□ -0.43
CPSF7-217ENST00000537162 CCL14Q16627 93 aa12.35□□□□□ -0.43
CPSF7-217ENST00000537162 FAM110CQ1W6H9 321 aa12.35□□□□□ -0.43
CPSF7-217ENST00000537162 MFSD14BQ5SR56 506 aa12.35□□□□□ -0.43
CPSF7-217ENST00000537162 NOL9Q5SY16 702 aaKnown RBP12.35□□□□□ -0.43
CPSF7-217ENST00000537162 DCAF15Q66K64 600 aa12.35□□□□□ -0.43
CPSF7-217ENST00000537162 C15orf52Q6ZUT6 534 aaKnown RBP12.35□□□□□ -0.43
CPSF7-217ENST00000537162 CCDC191Q8NCU4 936 aa12.35□□□□□ -0.43
CPSF7-217ENST00000537162 CD320Q9NPF0 282 aa12.35□□□□□ -0.43
CPSF7-217ENST00000537162 PDLIM7Q9NR12 457 aa12.35□□□□□ -0.43
CPSF7-217ENST00000537162 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.34□□□□□ -0.43
CPSF7-217ENST00000537162 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.34□□□□□ -0.43
CPSF7-217ENST00000537162 PEX10O60683 326 aa12.34□□□□□ -0.43
CPSF7-217ENST00000537162 EIF4G2P78344 907 aaKnown RBP eCLIP12.34□□□□□ -0.43
CPSF7-217ENST00000537162 TREML2Q5T2D2 321 aa12.34□□□□□ -0.43
CPSF7-217ENST00000537162 FASTKD5Q7L8L6 764 aaKnown RBP12.34□□□□□ -0.43
CPSF7-217ENST00000537162 PLEKHF1Q96S99 279 aa12.34□□□□□ -0.43
CPSF7-217ENST00000537162 CWC25Q9NXE8 425 aaPredicted RBP12.34□□□□□ -0.43
CPSF7-217ENST00000537162 SLC45A1Q9Y2W3 748 aa12.34□□□□□ -0.43
CPSF7-217ENST00000537162 PI4K2BG5E9Z4 385 aa12.33□□□□□ -0.44
CPSF7-217ENST00000537162 IGHMBP2P38935 993 aaKnown RBP12.33□□□□□ -0.44
CPSF7-217ENST00000537162 TRIM60Q495X7 471 aa12.33□□□□□ -0.44
CPSF7-217ENST00000537162 HDGFL1Q5TGJ6 251 aa12.33□□□□□ -0.44
CPSF7-217ENST00000537162 ZNF804AQ7Z570 1209 aa12.33□□□□□ -0.44
CPSF7-217ENST00000537162 FAM83AQ86UY5 434 aa12.33□□□□□ -0.44
CPSF7-217ENST00000537162 ANKS1AQ92625 1134 aa12.33□□□□□ -0.44
CPSF7-217ENST00000537162 PHAXQ9H814 394 aaKnown RBP12.33□□□□□ -0.44
CPSF7-217ENST00000537162 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.33□□□□□ -0.44
CPSF7-217ENST00000537162 AFG3L2Q9Y4W6 797 aa12.33□□□□□ -0.44
CPSF7-217ENST00000537162 ZHX2Q9Y6X8 837 aa12.33□□□□□ -0.44
CPSF7-217ENST00000537162 MYO9BQ13459 2157 aa12.32□□□□□ -0.44
CPSF7-217ENST00000537162 GBF1Q92538 1859 aa12.32□□□□□ -0.44
CPSF7-217ENST00000537162 PRR33A8MZF0 331 aa12.32□□□□□ -0.44
CPSF7-217ENST00000537162 TLL1O43897 1013 aa12.32□□□□□ -0.44
CPSF7-217ENST00000537162 SLC39A5Q6ZMH5 540 aa12.32□□□□□ -0.44
CPSF7-217ENST00000537162 MICALL1Q8N3F8 863 aa12.32□□□□□ -0.44
CPSF7-217ENST00000537162 PBX4Q9BYU1 374 aa12.32□□□□□ -0.44
CPSF7-217ENST00000537162 DBF4Q9UBU7 674 aaPredicted RBP12.32□□□□□ -0.44
CPSF7-217ENST00000537162 RPAP1Q9BWH6 1393 aaPredicted RBP12.31□□□□□ -0.44
CPSF7-217ENST00000537162 PTPRAP18433 802 aa12.31□□□□□ -0.44
CPSF7-217ENST00000537162 ITGA6P23229 1130 aa12.31□□□□□ -0.44
CPSF7-217ENST00000537162 CCDC84Q86UT8 332 aaPredicted RBP12.31□□□□□ -0.44
CPSF7-217ENST00000537162 HOOK2Q96ED9 719 aa12.31□□□□□ -0.44
CPSF7-217ENST00000537162 UIMC1Q96RL1 719 aa12.31□□□□□ -0.44
CPSF7-217ENST00000537162 SLURP2P0DP57 97 aa12.3□□□□□ -0.44
CPSF7-217ENST00000537162 ZKSCAN1P17029 563 aaPredicted RBP12.3□□□□□ -0.44
CPSF7-217ENST00000537162 GJC2Q5T442 439 aaPredicted RBP12.3□□□□□ -0.44
CPSF7-217ENST00000537162 APOBEC3HQ6NTF7 200 aaKnown RBP12.3□□□□□ -0.44
CPSF7-217ENST00000537162 MPHOSPH8Q99549 860 aa12.3□□□□□ -0.44
CPSF7-217ENST00000537162 HYPKQ9NX55 129 aa12.3□□□□□ -0.44
CPSF7-217ENST00000537162 AGTPBP1Q9UPW5 1226 aa12.3□□□□□ -0.44
CPSF7-217ENST00000537162 LOC285556D6RIA3 1793 aa12.29□□□□□ -0.44
CPSF7-217ENST00000537162 TRIM75PA6NK02 468 aa12.29□□□□□ -0.44
CPSF7-217ENST00000537162 PHF20L1A8MW92 1017 aa12.29□□□□□ -0.44
CPSF7-217ENST00000537162 AAK1Q2M2I8 961 aa12.29□□□□□ -0.44
CPSF7-217ENST00000537162 TDRD7Q8NHU6 1098 aaKnown RBP12.29□□□□□ -0.44
CPSF7-217ENST00000537162 TSPYL2Q9H2G4 693 aaPredicted RBP12.29□□□□□ -0.44
CPSF7-217ENST00000537162 TRANK1O15050 2925 aa12.29□□□□□ -0.44
CPSF7-217ENST00000537162 DOCK1Q14185 1865 aa12.28□□□□□ -0.44
CPSF7-217ENST00000537162 DNM1LO00429 736 aa12.28□□□□□ -0.44
CPSF7-217ENST00000537162 ERC2O15083 957 aa12.28□□□□□ -0.44
CPSF7-217ENST00000537162 IGKV5-2P06315 115 aa12.28□□□□□ -0.44
CPSF7-217ENST00000537162 XRCC5P13010 732 aaKnown RBP12.28□□□□□ -0.44
CPSF7-217ENST00000537162 FOXK2Q01167 660 aa12.28□□□□□ -0.44
CPSF7-217ENST00000537162 GOLGA2Q08379 1002 aa12.28□□□□□ -0.44
CPSF7-217ENST00000537162 TCP10Q12799 353 aa12.28□□□□□ -0.44
CPSF7-217ENST00000537162 SNX17Q15036 470 aa12.28□□□□□ -0.44
CPSF7-217ENST00000537162 FKBP1CQ5VVH2 108 aa12.28□□□□□ -0.44
CPSF7-217ENST00000537162 USP6NLQ92738 828 aa12.28□□□□□ -0.44
CPSF7-217ENST00000537162 ST18O60284 1047 aa12.27□□□□□ -0.45
CPSF7-217ENST00000537162 KRT37O76014 449 aa12.27□□□□□ -0.45
CPSF7-217ENST00000537162 GYG1P46976 350 aa12.27□□□□□ -0.45
CPSF7-217ENST00000537162 CCDC129Q6ZRS4 1044 aa12.27□□□□□ -0.45
CPSF7-217ENST00000537162 SCYL3Q8IZE3 742 aa12.27□□□□□ -0.45
CPSF7-217ENST00000537162 FAM151AQ8WW52 585 aa12.27□□□□□ -0.45
CPSF7-217ENST00000537162 ZDHHC15Q96MV8 337 aa12.27□□□□□ -0.45
CPSF7-217ENST00000537162 NUDT12Q9BQG2 462 aa12.27□□□□□ -0.45
CPSF7-217ENST00000537162 METTL22Q9BUU2 404 aaPredicted RBP12.27□□□□□ -0.45
CPSF7-217ENST00000537162 BABAM1Q9NWV8 329 aa12.27□□□□□ -0.45
CPSF7-217ENST00000537162 TMOD2Q9NZR1 351 aa12.27□□□□□ -0.45
CPSF7-217ENST00000537162 FLRT1Q9NZU1 646 aa12.27□□□□□ -0.45
CPSF7-217ENST00000537162 DOCK2Q92608 1830 aa12.27□□□□□ -0.45
CPSF7-217ENST00000537162 PPP2R1AP30153 589 aa12.26□□□□□ -0.45
CPSF7-217ENST00000537162 TLE2Q04725 743 aa12.26□□□□□ -0.45
CPSF7-217ENST00000537162 SKIV2LQ15477 1246 aaKnown RBP12.26□□□□□ -0.45
CPSF7-217ENST00000537162 ZFPM1Q8IX07 1006 aa12.26□□□□□ -0.45
CPSF7-217ENST00000537162 LPAR1Q92633 364 aa12.26□□□□□ -0.45
CPSF7-217ENST00000537162 TEKT1Q969V4 418 aa12.26□□□□□ -0.45
CPSF7-217ENST00000537162 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.26□□□□□ -0.452e-7■■■■□ 22.5
CPSF7-217ENST00000537162 NKX2-4Q9H2Z4 354 aa12.26□□□□□ -0.45
CPSF7-217ENST00000537162 DDX20Q9UHI6 824 aaKnown RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms