RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 ASIC4Q96FT7 647 aa10.2□□□□□ -0.78
CCDC7-208ENST00000537047 GNEQ9Y223 722 aaKnown RBP10.2□□□□□ -0.78
CCDC7-208ENST00000537047 ARNTP27540 789 aa10.19□□□□□ -0.78
CCDC7-208ENST00000537047 PLCB3Q01970 1234 aa10.19□□□□□ -0.78
CCDC7-208ENST00000537047 FZD5Q13467 585 aa10.19□□□□□ -0.78
CCDC7-208ENST00000537047 ENOX2Q16206 610 aaKnown RBP10.19□□□□□ -0.78
CCDC7-208ENST00000537047 CYP27C1Q4G0S4 372 aa10.19□□□□□ -0.78
CCDC7-208ENST00000537047 ISL2Q96A47 359 aa10.19□□□□□ -0.78
CCDC7-208ENST00000537047 SLC5A6Q9Y289 635 aa10.19□□□□□ -0.78
CCDC7-208ENST00000537047 TREHO43280 583 aa10.18□□□□□ -0.78
CCDC7-208ENST00000537047 JUNBP17275 347 aaPredicted RBP10.18□□□□□ -0.78
CCDC7-208ENST00000537047 GRIN3AQ8TCU5 1115 aa10.18□□□□□ -0.78
CCDC7-208ENST00000537047 GPBAR1Q8TDU6 330 aa10.18□□□□□ -0.78
CCDC7-208ENST00000537047 PPP4R2Q9NY27 417 aa10.18□□□□□ -0.78
CCDC7-208ENST00000537047 CSADQ9Y600 493 aa10.18□□□□□ -0.78
CCDC7-208ENST00000537047 ARID1BQ8NFD5 2236 aaPredicted RBP10.18□□□□□ -0.78
CCDC7-208ENST00000537047 FBXO24O75426 580 aa10.17□□□□□ -0.78
CCDC7-208ENST00000537047 PAGE1O75459 146 aa10.17□□□□□ -0.78
CCDC7-208ENST00000537047 ZC3H12AQ5D1E8 599 aaKnown RBP10.17□□□□□ -0.78
CCDC7-208ENST00000537047 DUSP23Q9BVJ7 150 aa10.17□□□□□ -0.78
CCDC7-208ENST00000537047 XRCC5P13010 732 aaKnown RBP10.16□□□□□ -0.78
CCDC7-208ENST00000537047 NME2P22392 152 aa10.16□□□□□ -0.78
CCDC7-208ENST00000537047 ZNF252P-AS1Q0IIN9 211 aa10.16□□□□□ -0.78
CCDC7-208ENST00000537047 PLCL1Q15111 1095 aa10.16□□□□□ -0.78
CCDC7-208ENST00000537047 RASIP1Q5U651 963 aa10.16□□□□□ -0.78
CCDC7-208ENST00000537047 TPTE2Q6XPS3 522 aa10.16□□□□□ -0.78
CCDC7-208ENST00000537047 UBE3DQ7Z6J8 389 aa10.16□□□□□ -0.78
CCDC7-208ENST00000537047 CBX8Q9HC52 389 aa10.16□□□□□ -0.78
CCDC7-208ENST00000537047 PCOLCE2Q9UKZ9 415 aa10.16□□□□□ -0.78
CCDC7-208ENST00000537047 CD8BP10966 210 aa10.15□□□□□ -0.78
CCDC7-208ENST00000537047 PDE4CQ08493 712 aa10.15□□□□□ -0.78
CCDC7-208ENST00000537047 ZNF792Q3KQV3 632 aa10.15□□□□□ -0.78
CCDC7-208ENST00000537047 POU5F2Q8N7G0 328 aa10.15□□□□□ -0.78
CCDC7-208ENST00000537047 NETO1Q8TDF5 533 aa10.15□□□□□ -0.78
CCDC7-208ENST00000537047 NECAB3Q96P71 396 aaPredicted RBP10.15□□□□□ -0.78
CCDC7-208ENST00000537047 OSBPL7Q9BZF2 842 aa10.15□□□□□ -0.78
CCDC7-208ENST00000537047 WWC3Q9ULE0 1092 aa10.15□□□□□ -0.78
CCDC7-208ENST00000537047 ENC1O14682 589 aa10.14□□□□□ -0.79
CCDC7-208ENST00000537047 PAPLNO95428 1278 aa10.14□□□□□ -0.79
CCDC7-208ENST00000537047 MAPK8P45983 427 aa10.14□□□□□ -0.79
CCDC7-208ENST00000537047 TOP6BLQ8N6T0 577 aa10.14□□□□□ -0.79
CCDC7-208ENST00000537047 SSU72Q9NP77 194 aaKnown RBP10.14□□□□□ -0.79
CCDC7-208ENST00000537047 PLAGL2Q9UPG8 496 aa10.14□□□□□ -0.79
CCDC7-208ENST00000537047 BRD1O95696 1058 aa10.13□□□□□ -0.79
CCDC7-208ENST00000537047 BMP6P22004 513 aa10.13□□□□□ -0.79
CCDC7-208ENST00000537047 OXCT1P55809 520 aa10.13□□□□□ -0.79
CCDC7-208ENST00000537047 PPM1JQ5JR12 505 aa10.13□□□□□ -0.79
CCDC7-208ENST00000537047 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.13□□□□□ -0.79
CCDC7-208ENST00000537047 STK11IPQ8N1F8 1099 aa10.13□□□□□ -0.79
CCDC7-208ENST00000537047 ACSBG1Q96GR2 724 aa10.13□□□□□ -0.79
CCDC7-208ENST00000537047 CACNA2D2Q9NY47 1150 aa10.13□□□□□ -0.79
CCDC7-208ENST00000537047 ADAMTS6Q9UKP5 1117 aa10.13□□□□□ -0.79
CCDC7-208ENST00000537047 DCDC2CA8MYV0 355 aa10.12□□□□□ -0.79
CCDC7-208ENST00000537047 C8AP07357 584 aa10.12□□□□□ -0.79
CCDC7-208ENST00000537047 NTF4P34130 210 aa10.12□□□□□ -0.79
CCDC7-208ENST00000537047 RNF214Q8ND24 703 aa10.12□□□□□ -0.79
CCDC7-208ENST00000537047 ITIH2P19823 946 aa10.11□□□□□ -0.79
CCDC7-208ENST00000537047 ERVK-24P63145 666 aa10.11□□□□□ -0.79
CCDC7-208ENST00000537047 JAG1P78504 1218 aa10.11□□□□□ -0.79
CCDC7-208ENST00000537047 C12orf40Q86WS4 652 aa10.11□□□□□ -0.79
CCDC7-208ENST00000537047 HEXIM2Q96MH2 286 aaKnown RBP10.11□□□□□ -0.79
CCDC7-208ENST00000537047 TIMELESSQ9UNS1 1208 aa10.1□□□□□ -0.79
CCDC7-208ENST00000537047 RBAK-RBAKDNI3L0D1 243 aa10.09□□□□□ -0.79
CCDC7-208ENST00000537047 RNASE1P07998 156 aaKnown RBP10.09□□□□□ -0.79
CCDC7-208ENST00000537047 MISP3Q96FF7 219 aa10.09□□□□□ -0.79
CCDC7-208ENST00000537047 EMILIN2Q9BXX0 1053 aa10.09□□□□□ -0.79
CCDC7-208ENST00000537047 MBNL3Q9NUK0 354 aaKnown RBP10.09□□□□□ -0.79
CCDC7-208ENST00000537047 CARMIL2Q6F5E8 1435 aa10.08□□□□□ -0.8
CCDC7-208ENST00000537047 CEACAM5P06731 702 aa10.08□□□□□ -0.8
CCDC7-208ENST00000537047 FUT4P22083 530 aa10.08□□□□□ -0.8
CCDC7-208ENST00000537047 GSTT1P30711 240 aa10.08□□□□□ -0.8
CCDC7-208ENST00000537047 FMR1Q06787 632 aaKnown RBP eCLIP10.08□□□□□ -0.8
CCDC7-208ENST00000537047 AOC3Q16853 763 aa10.08□□□□□ -0.8
CCDC7-208ENST00000537047 FAM214BQ7L5A3 538 aa10.08□□□□□ -0.8
CCDC7-208ENST00000537047 IVNS1ABPQ9Y6Y0 642 aa10.08□□□□□ -0.8
CCDC7-208ENST00000537047 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.08□□□□□ -0.8
CCDC7-208ENST00000537047 CELA3AP09093 270 aa10.07□□□□□ -0.8
CCDC7-208ENST00000537047 PRKCQQ04759 706 aa10.07□□□□□ -0.8
CCDC7-208ENST00000537047 IFI16Q16666 785 aaKnown RBP10.07□□□□□ -0.8
CCDC7-208ENST00000537047 ARHGAP27Q6ZUM4 889 aa10.07□□□□□ -0.8
CCDC7-208ENST00000537047 VAV3Q9UKW4 847 aa10.07□□□□□ -0.8
CCDC7-208ENST00000537047 HNRNPUQ00839 825 aaKnown RBP eCLIP10.06□□□□□ -0.8
CCDC7-208ENST00000537047 RING1Q06587 406 aa10.06□□□□□ -0.8
CCDC7-208ENST00000537047 LCE1DQ5T752 114 aa10.06□□□□□ -0.8
CCDC7-208ENST00000537047 RC3H2Q9HBD1 1191 aaKnown RBP10.06□□□□□ -0.8
CCDC7-208ENST00000537047 PRDM7Q9NQW5 492 aa10.06□□□□□ -0.8
CCDC7-208ENST00000537047 PTPN11Q06124 597 aaPredicted RBP10.05□□□□□ -0.8
CCDC7-208ENST00000537047 HRASLS5Q96KN8 279 aa10.05□□□□□ -0.8
CCDC7-208ENST00000537047 LLGL2Q6P1M3 1020 aa10.04□□□□□ -0.8
CCDC7-208ENST00000537047 LRRN4CLQ8ND94 238 aa10.04□□□□□ -0.8
CCDC7-208ENST00000537047 MKNK2Q9HBH9 465 aa10.04□□□□□ -0.8
CCDC7-208ENST00000537047 PRDM10Q9NQV6 1147 aa10.04□□□□□ -0.8
CCDC7-208ENST00000537047 PCDHA4Q9UN74 947 aa10.04□□□□□ -0.8
CCDC7-208ENST00000537047 BIN1O00499 593 aa10.03□□□□□ -0.8
CCDC7-208ENST00000537047 TRIM37O94972 964 aa10.03□□□□□ -0.8
CCDC7-208ENST00000537047 INPP5AQ14642 412 aa10.03□□□□□ -0.8
CCDC7-208ENST00000537047 ZBTB37Q5TC79 503 aa10.03□□□□□ -0.8
CCDC7-208ENST00000537047 PI4K2BQ8TCG2 481 aa10.03□□□□□ -0.8
CCDC7-208ENST00000537047 FBF1Q8TES7 1133 aa10.03□□□□□ -0.8
CCDC7-208ENST00000537047 ASB16Q96NS5 453 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms