RNA–Protein interactions for RNA: ENST00000536241.1

CDCA3-206, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 1,490 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-206ENST00000536241 TCP10Q12799 353 aa13.73□□□□□ -0.21
CDCA3-206ENST00000536241 ZFPM1Q8IX07 1006 aa13.73□□□□□ -0.21
CDCA3-206ENST00000536241 TRPM4Q8TD43 1214 aa13.73□□□□□ -0.21
CDCA3-206ENST00000536241 IDI2Q9BXS1 227 aa13.73□□□□□ -0.21
CDCA3-206ENST00000536241 TSHZ2Q9NRE2 1034 aa13.73□□□□□ -0.21
CDCA3-206ENST00000536241 SAP30BPQ9UHR5 308 aaKnown RBP13.73□□□□□ -0.21
CDCA3-206ENST00000536241 TCP10L2B9ZVM9 353 aa13.72□□□□□ -0.21
CDCA3-206ENST00000536241 SMIM22K7EJ46 135 aa13.72□□□□□ -0.21
CDCA3-206ENST00000536241 EVX2Q03828 476 aa13.72□□□□□ -0.21
CDCA3-206ENST00000536241 IMMTQ16891 758 aaKnown RBP13.72□□□□□ -0.21
CDCA3-206ENST00000536241 SLC4A8Q2Y0W8 1093 aa13.72□□□□□ -0.21
CDCA3-206ENST00000536241 SPDYE2Q495Y8 402 aa13.72□□□□□ -0.21
CDCA3-206ENST00000536241 RNF20Q5VTR2 975 aa13.72□□□□□ -0.21
CDCA3-206ENST00000536241 KCNB2Q92953 911 aa13.72□□□□□ -0.21
CDCA3-206ENST00000536241 L3MBTL3Q96JM7 780 aaPredicted RBP13.72□□□□□ -0.21
CDCA3-206ENST00000536241 VEZTQ9HBM0 779 aa13.72□□□□□ -0.21
CDCA3-206ENST00000536241 FAM198AQ9UFP1 575 aa13.72□□□□□ -0.21
CDCA3-206ENST00000536241 HACL1Q9UJ83 578 aa13.72□□□□□ -0.21
CDCA3-206ENST00000536241 SNX14Q9Y5W7 946 aa13.72□□□□□ -0.21
CDCA3-206ENST00000536241 TAF6LQ9Y6J9 622 aa13.72□□□□□ -0.21
CDCA3-206ENST00000536241 ASTN2O75129 1339 aaPredicted RBP13.72□□□□□ -0.21
CDCA3-206ENST00000536241 FLT1P17948 1338 aa13.72□□□□□ -0.21
CDCA3-206ENST00000536241 POTECB2RU33 542 aa13.71□□□□□ -0.21
CDCA3-206ENST00000536241 POLR3DP05423 398 aaPredicted RBP13.71□□□□□ -0.21
CDCA3-206ENST00000536241 CYP2D6P10635 497 aa13.71□□□□□ -0.21
CDCA3-206ENST00000536241 ZKSCAN1P17029 563 aaPredicted RBP13.71□□□□□ -0.21
CDCA3-206ENST00000536241 CTDSPL2Q05D32 466 aa13.71□□□□□ -0.21
CDCA3-206ENST00000536241 STK11IPQ8N1F8 1099 aa13.71□□□□□ -0.21
CDCA3-206ENST00000536241 KIF2CQ99661 725 aa13.71□□□□□ -0.21
CDCA3-206ENST00000536241 INCENPQ9NQS7 918 aa13.71□□□□□ -0.21
CDCA3-206ENST00000536241 ADARB2Q9NS39 739 aaKnown RBP13.71□□□□□ -0.21
CDCA3-206ENST00000536241 TMOD2Q9NZR1 351 aa13.71□□□□□ -0.21
CDCA3-206ENST00000536241 SCAF8Q9UPN6 1271 aaKnown RBP13.71□□□□□ -0.21
CDCA3-206ENST00000536241 PLCD1P51178 756 aa13.7□□□□□ -0.22
CDCA3-206ENST00000536241 PPARAQ07869 468 aa13.7□□□□□ -0.22
CDCA3-206ENST00000536241 ADCK5Q3MIX3 580 aa13.7□□□□□ -0.22
CDCA3-206ENST00000536241 TSGA10IPQ3SY00 556 aa13.7□□□□□ -0.22
CDCA3-206ENST00000536241 SBK1Q52WX2 424 aa13.7□□□□□ -0.22
CDCA3-206ENST00000536241 C12orf60Q5U649 245 aa13.7□□□□□ -0.22
CDCA3-206ENST00000536241 OSBPL5Q9H0X9 879 aaPredicted RBP13.7□□□□□ -0.22
CDCA3-206ENST00000536241 BAZ2AQ9UIF9 1905 aaKnown RBP13.7□□□□□ -0.22
CDCA3-206ENST00000536241 ZMYM6O95789 1325 aa13.7□□□□□ -0.22
CDCA3-206ENST00000536241 ENTPD3O75355 529 aa13.69□□□□□ -0.22
CDCA3-206ENST00000536241 NPM3O75607 178 aaKnown RBP13.69□□□□□ -0.22
CDCA3-206ENST00000536241 EPHX2P34913 555 aa13.69□□□□□ -0.22
CDCA3-206ENST00000536241 NBPF3Q9H094 633 aa13.69□□□□□ -0.22
CDCA3-206ENST00000536241 RRAGCQ9HB90 399 aa13.69□□□□□ -0.22
CDCA3-206ENST00000536241 ARPP21Q9UBL0 812 aaPredicted RBP13.69□□□□□ -0.22
CDCA3-206ENST00000536241 TACC3Q9Y6A5 838 aa13.69□□□□□ -0.22
CDCA3-206ENST00000536241 CDK5RAP2Q96SN8 1893 aa13.69□□□□□ -0.22
CDCA3-206ENST00000536241 DDTLA6NHG4 134 aaPredicted RBP13.68□□□□□ -0.22
CDCA3-206ENST00000536241 E7EWF7 191 aa13.68□□□□□ -0.22
CDCA3-206ENST00000536241 ANAPC15P60006 121 aa13.68□□□□□ -0.22
CDCA3-206ENST00000536241 ANGEL2Q5VTE6 544 aaKnown RBP13.68□□□□□ -0.22
CDCA3-206ENST00000536241 FKBP1CQ5VVH2 108 aa13.68□□□□□ -0.22
CDCA3-206ENST00000536241 STOX1Q6ZVD7 989 aa13.68□□□□□ -0.22
CDCA3-206ENST00000536241 SH3BP5LQ7L8J4 393 aa13.68□□□□□ -0.22
CDCA3-206ENST00000536241 ZSCAN29Q8IWY8 852 aaPredicted RBP13.68□□□□□ -0.22
CDCA3-206ENST00000536241 AMOTL1Q8IY63 956 aa13.68□□□□□ -0.22
CDCA3-206ENST00000536241 FAM151AQ8WW52 585 aa13.68□□□□□ -0.22
CDCA3-206ENST00000536241 ANAPC4Q9UJX5 808 aa13.68□□□□□ -0.22
CDCA3-206ENST00000536241 ECM29Q5VYK3 1845 aa13.68□□□□□ -0.22
CDCA3-206ENST00000536241 IQCA1LA6NCM1 817 aa13.67□□□□□ -0.22
CDCA3-206ENST00000536241 USP50Q70EL3 339 aaPredicted RBP13.67□□□□□ -0.22
CDCA3-206ENST00000536241 TTC6Q86TZ1 520 aa13.67□□□□□ -0.22
CDCA3-206ENST00000536241 TBC1D10CQ8IV04 446 aa13.67□□□□□ -0.22
CDCA3-206ENST00000536241 DYNLL2Q96FJ2 89 aa13.67□□□□□ -0.22
CDCA3-206ENST00000536241 TAF1DQ9H5J8 278 aaPredicted RBP13.67□□□□□ -0.22
CDCA3-206ENST00000536241 SLURP2P0DP57 97 aa13.67□□□□□ -0.22
CDCA3-206ENST00000536241 TNNI2P48788 182 aa13.67□□□□□ -0.22
CDCA3-206ENST00000536241 CNTNAP1P78357 1384 aa13.67□□□□□ -0.22
CDCA3-206ENST00000536241 COL9A3Q14050 684 aaPredicted RBP13.67□□□□□ -0.22
CDCA3-206ENST00000536241 RASA3Q14644 834 aa13.67□□□□□ -0.22
CDCA3-206ENST00000536241 EAPPQ56P03 285 aaPredicted RBP13.67□□□□□ -0.22
CDCA3-206ENST00000536241 AKNAD1Q5T1N1 836 aa13.67□□□□□ -0.22
CDCA3-206ENST00000536241 MFSD6Q6ZSS7 791 aa13.67□□□□□ -0.22
CDCA3-206ENST00000536241 FAM83AQ86UY5 434 aa13.67□□□□□ -0.22
CDCA3-206ENST00000536241 ZNF526Q8TF50 670 aaPredicted RBP13.67□□□□□ -0.22
CDCA3-206ENST00000536241 JAKMIP1Q96N16 626 aaKnown RBP13.67□□□□□ -0.22
CDCA3-206ENST00000536241 NEK1Q96PY6 1258 aa13.67□□□□□ -0.22
CDCA3-206ENST00000536241 TMEM39BQ9GZU3 492 aa13.67□□□□□ -0.22
CDCA3-206ENST00000536241 DHX36Q9H2U1 1008 aaKnown RBP13.67□□□□□ -0.22
CDCA3-206ENST00000536241 MYH1P12882 1939 aa13.66□□□□□ -0.22
CDCA3-206ENST00000536241 SLC3A2P08195 630 aaKnown RBP13.66□□□□□ -0.22
CDCA3-206ENST00000536241 CPA1P15085 419 aa13.66□□□□□ -0.22
CDCA3-206ENST00000536241 VEGFAP15692 232 aaPredicted RBP13.66□□□□□ -0.22
CDCA3-206ENST00000536241 TNFAIP1Q13829 316 aa13.66□□□□□ -0.22
CDCA3-206ENST00000536241 KRT32Q14532 448 aa13.66□□□□□ -0.22
CDCA3-206ENST00000536241 NKX2-3Q8TAU0 364 aa13.66□□□□□ -0.22
CDCA3-206ENST00000536241 STAG1Q8WVM7 1258 aa13.66□□□□□ -0.22
CDCA3-206ENST00000536241 IL17RAQ96F46 866 aa13.66□□□□□ -0.22
CDCA3-206ENST00000536241 DEFB129Q9H1M3 183 aa13.66□□□□□ -0.22
CDCA3-206ENST00000536241 TOMM22Q9NS69 142 aa13.66□□□□□ -0.22
CDCA3-206ENST00000536241 GGA3Q9NZ52 723 aa13.66□□□□□ -0.22
CDCA3-206ENST00000536241 PI4KBQ9UBF8 816 aa13.66□□□□□ -0.22
CDCA3-206ENST00000536241 RBM19Q9Y4C8 960 aaKnown RBP13.66□□□□□ -0.22
CDCA3-206ENST00000536241 POLR2AP24928 1970 aaKnown RBP13.66□□□□□ -0.22
CDCA3-206ENST00000536241 FOCADQ5VW36 1801 aa13.65□□□□□ -0.22
CDCA3-206ENST00000536241 PRDM1O75626 825 aa13.65□□□□□ -0.22
CDCA3-206ENST00000536241 HLA-DOAP06340 250 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms