RNA–Protein interactions for RNA: ENST00000535883.5

LRTOMT-211, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 1 (best)

Gene LRTOMT, Length 1,263 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-211ENST00000535883 DIXDC1Q155Q3 683 aa11.22□□□□□ -0.61
LRTOMT-211ENST00000535883 CCDC57Q2TAC2 916 aa11.22□□□□□ -0.61
LRTOMT-211ENST00000535883 TREML2Q5T2D2 321 aa11.22□□□□□ -0.61
LRTOMT-211ENST00000535883 HHIPL2Q6UWX4 724 aa11.22□□□□□ -0.61
LRTOMT-211ENST00000535883 ANKRD13CQ8N6S4 541 aa11.22□□□□□ -0.61
LRTOMT-211ENST00000535883 SUCLG2Q96I99 432 aa11.22□□□□□ -0.61
LRTOMT-211ENST00000535883 UBE2OQ9C0C9 1292 aaKnown RBP11.22□□□□□ -0.61
LRTOMT-211ENST00000535883 TAOK2Q9UL54 1235 aa11.22□□□□□ -0.61
LRTOMT-211ENST00000535883 OGDHLQ9ULD0 1010 aa11.22□□□□□ -0.61
LRTOMT-211ENST00000535883 DAGLAQ9Y4D2 1042 aa11.22□□□□□ -0.61
LRTOMT-211ENST00000535883 DDX60LQ5H9U9 1706 aaKnown RBP11.21□□□□□ -0.61
LRTOMT-211ENST00000535883 XIRP2A4UGR9 3374 aa11.21□□□□□ -0.61
LRTOMT-211ENST00000535883 REV3LO60673 3130 aa11.21□□□□□ -0.61
LRTOMT-211ENST00000535883 COL6A1P12109 1028 aa11.21□□□□□ -0.61
LRTOMT-211ENST00000535883 MDM2Q00987 491 aaPredicted RBP11.21□□□□□ -0.61
LRTOMT-211ENST00000535883 LRRC26Q2I0M4 334 aa11.21□□□□□ -0.61
LRTOMT-211ENST00000535883 NBPF3Q9H094 633 aa11.21□□□□□ -0.61
LRTOMT-211ENST00000535883 PLXNB2O15031 1838 aa11.21□□□□□ -0.62
LRTOMT-211ENST00000535883 PTPRFP10586 1907 aa11.2□□□□□ -0.62
LRTOMT-211ENST00000535883 GRM8O00222 908 aa11.2□□□□□ -0.62
LRTOMT-211ENST00000535883 VAMP4O75379 141 aa11.2□□□□□ -0.62
LRTOMT-211ENST00000535883 MAP3K10Q02779 954 aa11.2□□□□□ -0.62
LRTOMT-211ENST00000535883 FAM109BQ6ICB4 259 aaPredicted RBP11.2□□□□□ -0.62
LRTOMT-211ENST00000535883 GADL1Q6ZQY3 521 aa11.2□□□□□ -0.62
LRTOMT-211ENST00000535883 ANKLE1Q8NAG6 615 aa11.2□□□□□ -0.62
LRTOMT-211ENST00000535883 KLHDC4Q8TBB5 520 aa11.2□□□□□ -0.62
LRTOMT-211ENST00000535883 C11orf49Q9H6J7 331 aa11.2□□□□□ -0.62
LRTOMT-211ENST00000535883 PHIPQ8WWQ0 1821 aa11.2□□□□□ -0.62
LRTOMT-211ENST00000535883 NBPF7P0C2Y1 421 aaPredicted RBP11.19□□□□□ -0.62
LRTOMT-211ENST00000535883 FGFR2P21802 821 aa11.19□□□□□ -0.62
LRTOMT-211ENST00000535883 CALD1Q05682 793 aaKnown RBP11.19□□□□□ -0.62
LRTOMT-211ENST00000535883 RRP1BQ14684 758 aaKnown RBP11.19□□□□□ -0.62
LRTOMT-211ENST00000535883 TAF7LQ5H9L4 462 aa11.19□□□□□ -0.62
LRTOMT-211ENST00000535883 MAP3K21Q5TCX8 1036 aa11.19□□□□□ -0.62
LRTOMT-211ENST00000535883 POTEEQ6S8J3 1075 aa11.19□□□□□ -0.62
LRTOMT-211ENST00000535883 TBC1D22AQ8WUA7 517 aa11.19□□□□□ -0.62
LRTOMT-211ENST00000535883 TRIB2Q92519 343 aa11.19□□□□□ -0.62
LRTOMT-211ENST00000535883 CDX2Q99626 313 aaPredicted RBP11.19□□□□□ -0.62
LRTOMT-211ENST00000535883 TMOD2Q9NZR1 351 aa11.19□□□□□ -0.62
LRTOMT-211ENST00000535883 SLC45A1Q9Y2W3 748 aa11.19□□□□□ -0.62
LRTOMT-211ENST00000535883 CHD9Q3L8U1 2897 aa11.18□□□□□ -0.62
LRTOMT-211ENST00000535883 DDTLA6NHG4 134 aaPredicted RBP11.18□□□□□ -0.62
LRTOMT-211ENST00000535883 CAPN2P17655 700 aa11.18□□□□□ -0.62
LRTOMT-211ENST00000535883 PRDX5P30044 214 aa11.18□□□□□ -0.62
LRTOMT-211ENST00000535883 CCDC184Q52MB2 194 aa11.18□□□□□ -0.62
LRTOMT-211ENST00000535883 LHX8Q68G74 356 aa11.18□□□□□ -0.62
LRTOMT-211ENST00000535883 FASTKD5Q7L8L6 764 aaKnown RBP11.18□□□□□ -0.62
LRTOMT-211ENST00000535883 WWC1Q8IX03 1113 aa11.18□□□□□ -0.62
LRTOMT-211ENST00000535883 SCYL3Q8IZE3 742 aa11.18□□□□□ -0.62
LRTOMT-211ENST00000535883 ANKRD44Q8N8A2 993 aa11.18□□□□□ -0.62
LRTOMT-211ENST00000535883 HOOK2Q96ED9 719 aa11.18□□□□□ -0.62
LRTOMT-211ENST00000535883 DDX4Q9NQI0 724 aaKnown RBP11.18□□□□□ -0.62
LRTOMT-211ENST00000535883 TRIM75PA6NK02 468 aa11.17□□□□□ -0.62
LRTOMT-211ENST00000535883 PDE8BO95263 885 aa11.17□□□□□ -0.62
LRTOMT-211ENST00000535883 HMGCRP04035 888 aa11.17□□□□□ -0.62
LRTOMT-211ENST00000535883 VPS37DQ86XT2 251 aa11.17□□□□□ -0.62
LRTOMT-211ENST00000535883 CHMP4AQ9BY43 222 aa11.17□□□□□ -0.62
LRTOMT-211ENST00000535883 TTYH1Q9H313 450 aaPredicted RBP11.17□□□□□ -0.62
LRTOMT-211ENST00000535883 HMX1Q9NP08 348 aaPredicted RBP11.17□□□□□ -0.62
LRTOMT-211ENST00000535883 USP40Q9NVE5 1235 aa11.17□□□□□ -0.62
LRTOMT-211ENST00000535883 SUGT1Q9Y2Z0 365 aa11.17□□□□□ -0.62
LRTOMT-211ENST00000535883 RFX7Q2KHR2 1363 aa11.16□□□□□ -0.62
LRTOMT-211ENST00000535883 MROH5Q6ZUA9 1318 aa11.16□□□□□ -0.62
LRTOMT-211ENST00000535883 AK9Q5TCS8 1911 aa11.16□□□□□ -0.62
LRTOMT-211ENST00000535883 FRAT2O75474 233 aaPredicted RBP11.16□□□□□ -0.62
LRTOMT-211ENST00000535883 KCNA4P22459 653 aa11.16□□□□□ -0.62
LRTOMT-211ENST00000535883 RGS3P49796 1198 aa11.16□□□□□ -0.62
LRTOMT-211ENST00000535883 FAM110CQ1W6H9 321 aa11.16□□□□□ -0.62
LRTOMT-211ENST00000535883 SMCR8Q8TEV9 937 aaPredicted RBP11.16□□□□□ -0.62
LRTOMT-211ENST00000535883 COA7Q96BR5 231 aa11.16□□□□□ -0.62
LRTOMT-211ENST00000535883 SEMA6BQ9H3T3 888 aa11.16□□□□□ -0.62
LRTOMT-211ENST00000535883 BICC1Q9H694 974 aaKnown RBP11.16□□□□□ -0.62
LRTOMT-211ENST00000535883 SPINK5Q9NQ38 1064 aaPredicted RBP11.16□□□□□ -0.62
LRTOMT-211ENST00000535883 AGTPBP1Q9UPW5 1226 aa11.16□□□□□ -0.62
LRTOMT-211ENST00000535883 CHD7Q9P2D1 2997 aa11.15□□□□□ -0.62
LRTOMT-211ENST00000535883 FAM196BA6NMK8 535 aa11.15□□□□□ -0.62
LRTOMT-211ENST00000535883 CYP2B6P20813 491 aa11.15□□□□□ -0.62
LRTOMT-211ENST00000535883 COL9A1P20849 921 aa11.15□□□□□ -0.62
LRTOMT-211ENST00000535883 CCND3P30281 292 aaPredicted RBP11.15□□□□□ -0.62
LRTOMT-211ENST00000535883 CACNB2Q08289 660 aaPredicted RBP11.15□□□□□ -0.62
LRTOMT-211ENST00000535883 CCL14Q16627 93 aa11.15□□□□□ -0.62
LRTOMT-211ENST00000535883 RABL6Q3YEC7 729 aaPredicted RBP11.15□□□□□ -0.62
LRTOMT-211ENST00000535883 METTL24Q5JXM2 366 aa11.15□□□□□ -0.62
LRTOMT-211ENST00000535883 C9orf50Q5SZB4 431 aa11.15□□□□□ -0.62
LRTOMT-211ENST00000535883 MAFAQ8NHW3 353 aaPredicted RBP11.15□□□□□ -0.62
LRTOMT-211ENST00000535883 MYLIPQ8WY64 445 aa11.15□□□□□ -0.62
LRTOMT-211ENST00000535883 TXNRD2Q9NNW7 524 aa11.15□□□□□ -0.62
LRTOMT-211ENST00000535883 UTYO14607 1347 aa11.14□□□□□ -0.63
LRTOMT-211ENST00000535883 FANCIQ9NVI1 1328 aa11.14□□□□□ -0.63
LRTOMT-211ENST00000535883 PRKAR2AP13861 404 aaKnown RBP11.14□□□□□ -0.63
LRTOMT-211ENST00000535883 JAG1P78504 1218 aa11.14□□□□□ -0.63
LRTOMT-211ENST00000535883 EXOSC9Q06265 439 aaKnown RBP11.14□□□□□ -0.63
LRTOMT-211ENST00000535883 CAVIN4Q5BKX8 364 aa11.14□□□□□ -0.63
LRTOMT-211ENST00000535883 USP38Q8NB14 1042 aa11.14□□□□□ -0.63
LRTOMT-211ENST00000535883 USP6NLQ92738 828 aa11.14□□□□□ -0.63
LRTOMT-211ENST00000535883 IDI2Q9BXS1 227 aa11.14□□□□□ -0.63
LRTOMT-211ENST00000535883 ASCC2Q9H1I8 757 aaPredicted RBP11.14□□□□□ -0.63
LRTOMT-211ENST00000535883 PICK1Q9NRD5 415 aa11.14□□□□□ -0.63
LRTOMT-211ENST00000535883 C9orf78Q9NZ63 289 aaPredicted RBP11.14□□□□□ -0.63
LRTOMT-211ENST00000535883 BDP1A6H8Y1 2624 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms