RNA–Protein interactions for RNA: ENST00000535835.5

SPARCL1-208, Transcript of SPARC like 1, humanhuman

TSL 4

Gene SPARCL1, Length 561 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-208ENST00000535835 FAM214BQ7L5A3 538 aa5.54□□□□□ -1.52
SPARCL1-208ENST00000535835 KSR1Q8IVT5 923 aa5.54□□□□□ -1.52
SPARCL1-208ENST00000535835 SMYD4Q8IYR2 804 aaPredicted RBP5.54□□□□□ -1.52
SPARCL1-208ENST00000535835 RBCK1Q9BYM8 510 aa5.54□□□□□ -1.52
SPARCL1-208ENST00000535835 ATXN3LQ9H3M9 355 aa5.54□□□□□ -1.52
SPARCL1-208ENST00000535835 MBNL3Q9NUK0 354 aaKnown RBP5.54□□□□□ -1.52
SPARCL1-208ENST00000535835 PLAGL2Q9UPG8 496 aa5.54□□□□□ -1.52
SPARCL1-208ENST00000535835 GADD45BO75293 160 aaPredicted RBP5.53□□□□□ -1.52
SPARCL1-208ENST00000535835 FUT4P22083 530 aa5.53□□□□□ -1.52
SPARCL1-208ENST00000535835 OXCT1P55809 520 aa5.53□□□□□ -1.52
SPARCL1-208ENST00000535835 PLCL1Q15111 1095 aa5.53□□□□□ -1.52
SPARCL1-208ENST00000535835 CYP27C1Q4G0S4 372 aa5.53□□□□□ -1.52
SPARCL1-208ENST00000535835 STK11IPQ8N1F8 1099 aa5.53□□□□□ -1.52
SPARCL1-208ENST00000535835 NETO1Q8TDF5 533 aa5.53□□□□□ -1.52
SPARCL1-208ENST00000535835 MISP3Q96FF7 219 aa5.53□□□□□ -1.52
SPARCL1-208ENST00000535835 DUSP23Q9BVJ7 150 aa5.53□□□□□ -1.52
SPARCL1-208ENST00000535835 CACNA2D2Q9NY47 1150 aa5.53□□□□□ -1.52
SPARCL1-208ENST00000535835 TRAK1Q9UPV9 953 aa5.53□□□□□ -1.52
SPARCL1-208ENST00000535835 PRRG2O14669 202 aa5.52□□□□□ -1.53
SPARCL1-208ENST00000535835 RNASE1P07998 156 aaKnown RBP5.52□□□□□ -1.53
SPARCL1-208ENST00000535835 ZC3H12AQ5D1E8 599 aaKnown RBP5.52□□□□□ -1.53
SPARCL1-208ENST00000535835 ISL2Q96A47 359 aa5.52□□□□□ -1.53
SPARCL1-208ENST00000535835 SLC38A3Q99624 504 aa5.52□□□□□ -1.53
SPARCL1-208ENST00000535835 SLFN14P0C7P3 912 aa5.51□□□□□ -1.53
SPARCL1-208ENST00000535835 HCLS1P14317 486 aaPredicted RBP5.51□□□□□ -1.53
SPARCL1-208ENST00000535835 NTF4P34130 210 aa5.51□□□□□ -1.53
SPARCL1-208ENST00000535835 FCGRTP55899 365 aa5.51□□□□□ -1.53
SPARCL1-208ENST00000535835 PRKCQQ04759 706 aa5.51□□□□□ -1.53
SPARCL1-208ENST00000535835 ZNF252P-AS1Q0IIN9 211 aa5.51□□□□□ -1.53
SPARCL1-208ENST00000535835 LILRA6Q6PI73 481 aa5.51□□□□□ -1.53
SPARCL1-208ENST00000535835 MPRIPQ6WCQ1 1025 aa5.51□□□□□ -1.53
SPARCL1-208ENST00000535835 DMRTB1Q96MA1 342 aa5.51□□□□□ -1.53
SPARCL1-208ENST00000535835 HEXIM2Q96MH2 286 aaKnown RBP5.51□□□□□ -1.53
SPARCL1-208ENST00000535835 PIDD1Q9HB75 910 aa5.51□□□□□ -1.53
SPARCL1-208ENST00000535835 MKNK2Q9HBH9 465 aa5.51□□□□□ -1.53
SPARCL1-208ENST00000535835 TMEM39AQ9NV64 488 aa5.51□□□□□ -1.53
SPARCL1-208ENST00000535835 VAV3Q9UKW4 847 aa5.51□□□□□ -1.53
SPARCL1-208ENST00000535835 NCANO14594 1321 aa5.5□□□□□ -1.53
SPARCL1-208ENST00000535835 DSC3Q14574 896 aa5.5□□□□□ -1.53
SPARCL1-208ENST00000535835 TMC7Q7Z402 723 aa5.5□□□□□ -1.53
SPARCL1-208ENST00000535835 UBE3DQ7Z6J8 389 aa5.5□□□□□ -1.53
SPARCL1-208ENST00000535835 ATG4DQ86TL0 474 aaPredicted RBP5.5□□□□□ -1.53
SPARCL1-208ENST00000535835 LRRN4CLQ8ND94 238 aa5.5□□□□□ -1.53
SPARCL1-208ENST00000535835 C3orf58Q8NDZ4 430 aa5.5□□□□□ -1.53
SPARCL1-208ENST00000535835 BCO2Q9BYV7 579 aa5.5□□□□□ -1.53
SPARCL1-208ENST00000535835 TNKS2Q9H2K2 1166 aa5.5□□□□□ -1.53
SPARCL1-208ENST00000535835 PCOLCE2Q9UKZ9 415 aa5.5□□□□□ -1.53
SPARCL1-208ENST00000535835 B8ZZF3 427 aa5.49□□□□□ -1.53
SPARCL1-208ENST00000535835 ARNTP27540 789 aa5.49□□□□□ -1.53
SPARCL1-208ENST00000535835 ERVK-24P63145 666 aa5.49□□□□□ -1.53
SPARCL1-208ENST00000535835 IFI16Q16666 785 aaKnown RBP5.49□□□□□ -1.53
SPARCL1-208ENST00000535835 DTHD1Q6ZMT9 781 aa5.49□□□□□ -1.53
SPARCL1-208ENST00000535835 SULF2Q8IWU5 870 aa5.49□□□□□ -1.53
SPARCL1-208ENST00000535835 KCNB2Q92953 911 aa5.49□□□□□ -1.53
SPARCL1-208ENST00000535835 GPN3Q9UHW5 284 aaPredicted RBP5.49□□□□□ -1.53
SPARCL1-208ENST00000535835 SOWAHDA6NJG2 315 aa5.48□□□□□ -1.53
SPARCL1-208ENST00000535835 RNGTTO60942 597 aaKnown RBP5.48□□□□□ -1.53
SPARCL1-208ENST00000535835 CEACAM5P06731 702 aa5.48□□□□□ -1.53
SPARCL1-208ENST00000535835 RING1Q06587 406 aa5.48□□□□□ -1.53
SPARCL1-208ENST00000535835 NXPE4Q6UWF7 544 aa5.48□□□□□ -1.53
SPARCL1-208ENST00000535835 TOP6BLQ8N6T0 577 aa5.48□□□□□ -1.53
SPARCL1-208ENST00000535835 RETREG2Q8NC44 543 aa5.48□□□□□ -1.53
SPARCL1-208ENST00000535835 RNF214Q8ND24 703 aa5.48□□□□□ -1.53
SPARCL1-208ENST00000535835 TMC1Q8TDI8 760 aa5.48□□□□□ -1.53
SPARCL1-208ENST00000535835 GPBAR1Q8TDU6 330 aa5.48□□□□□ -1.53
SPARCL1-208ENST00000535835 RC3H2Q9HBD1 1191 aaKnown RBP5.48□□□□□ -1.53
SPARCL1-208ENST00000535835 XRCC5P13010 732 aaKnown RBP5.47□□□□□ -1.53
SPARCL1-208ENST00000535835 BMP6P22004 513 aa5.47□□□□□ -1.53
SPARCL1-208ENST00000535835 NME2P22392 152 aa5.47□□□□□ -1.53
SPARCL1-208ENST00000535835 PPP2R3AQ06190 1150 aa5.47□□□□□ -1.53
SPARCL1-208ENST00000535835 AOC3Q16853 763 aa5.47□□□□□ -1.53
SPARCL1-208ENST00000535835 RASIP1Q5U651 963 aa5.47□□□□□ -1.53
SPARCL1-208ENST00000535835 GRIN3AQ8TCU5 1115 aa5.47□□□□□ -1.53
SPARCL1-208ENST00000535835 PAGE1O75459 146 aa5.46□□□□□ -1.54
SPARCL1-208ENST00000535835 ENOX2Q16206 610 aaKnown RBP5.46□□□□□ -1.54
SPARCL1-208ENST00000535835 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.46□□□□□ -1.54
SPARCL1-208ENST00000535835 MAP1SQ66K74 1059 aaPredicted RBP5.46□□□□□ -1.54
SPARCL1-208ENST00000535835 SPACA3Q8IXA5 215 aa5.46□□□□□ -1.54
SPARCL1-208ENST00000535835 FAM168AQ92567 244 aa5.46□□□□□ -1.54
SPARCL1-208ENST00000535835 HRASLS5Q96KN8 279 aa5.46□□□□□ -1.54
SPARCL1-208ENST00000535835 NECAB3Q96P71 396 aaPredicted RBP5.46□□□□□ -1.54
SPARCL1-208ENST00000535835 TMEM265A0A087WTH1 108 aa5.45□□□□□ -1.54
SPARCL1-208ENST00000535835 ENC1O14682 589 aa5.45□□□□□ -1.54
SPARCL1-208ENST00000535835 TREHO43280 583 aa5.45□□□□□ -1.54
SPARCL1-208ENST00000535835 MESP2Q0VG99 397 aa5.45□□□□□ -1.54
SPARCL1-208ENST00000535835 NKPD1Q17RQ9 610 aa5.45□□□□□ -1.54
SPARCL1-208ENST00000535835 PPM1JQ5JR12 505 aa5.45□□□□□ -1.54
SPARCL1-208ENST00000535835 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.45□□□□□ -1.54
SPARCL1-208ENST00000535835 PI4K2BQ8TCG2 481 aa5.45□□□□□ -1.54
SPARCL1-208ENST00000535835 TMEM40Q8WWA1 233 aa5.45□□□□□ -1.54
SPARCL1-208ENST00000535835 TOX2Q96NM4 488 aa5.45□□□□□ -1.54
SPARCL1-208ENST00000535835 PRDM7Q9NQW5 492 aa5.45□□□□□ -1.54
SPARCL1-208ENST00000535835 NLRP2Q9NX02 1062 aa5.45□□□□□ -1.54
SPARCL1-208ENST00000535835 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.45□□□□□ -1.54
SPARCL1-208ENST00000535835 AKAP2Q9Y2D5 859 aa5.45□□□□□ -1.54
SPARCL1-208ENST00000535835 PNMA6FA0A0J9YX94 578 aa5.44□□□□□ -1.54
SPARCL1-208ENST00000535835 RBAK-RBAKDNI3L0D1 243 aa5.44□□□□□ -1.54
SPARCL1-208ENST00000535835 IGF2BP3O00425 579 aaKnown RBP eCLIP5.44□□□□□ -1.54
SPARCL1-208ENST00000535835 EOMESO95936 686 aa5.44□□□□□ -1.54
SPARCL1-208ENST00000535835 ITIH2P19823 946 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms