RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 PCDHA4Q9UN74 947 aa8.9□□□□□ -0.98
PRKDC-205ENST00000535375 WDR64B1ANS9 1081 aa8.89□□□□□ -0.99
PRKDC-205ENST00000535375 ST13P50502 369 aaKnown RBP8.89□□□□□ -0.99
PRKDC-205ENST00000535375 ARTNQ5T4W7 220 aa8.89□□□□□ -0.99
PRKDC-205ENST00000535375 MPRIPQ6WCQ1 1025 aa8.89□□□□□ -0.99
PRKDC-205ENST00000535375 SHKBP1Q8TBC3 707 aa8.89□□□□□ -0.99
PRKDC-205ENST00000535375 TBC1D32Q96NH3 1257 aa8.89□□□□□ -0.99
PRKDC-205ENST00000535375 LGR6Q9HBX8 967 aa8.89□□□□□ -0.99
PRKDC-205ENST00000535375 ZFP64Q9NPA5 681 aa8.89□□□□□ -0.99
PRKDC-205ENST00000535375 DISC1Q9NRI5 854 aa8.89□□□□□ -0.99
PRKDC-205ENST00000535375 ZC3H12AQ5D1E8 599 aaKnown RBP8.88□□□□□ -0.99
PRKDC-205ENST00000535375 DIEXFQ68CQ4 756 aaKnown RBP8.88□□□□□ -0.99
PRKDC-205ENST00000535375 SMYD4Q8IYR2 804 aaPredicted RBP8.88□□□□□ -0.99
PRKDC-205ENST00000535375 ELMO3Q96BJ8 720 aa8.88□□□□□ -0.99
PRKDC-205ENST00000535375 PCDHGC5Q9Y5F6 944 aa8.88□□□□□ -0.99
PRKDC-205ENST00000535375 USP31Q70CQ4 1352 aa8.87□□□□□ -0.99
PRKDC-205ENST00000535375 CTSHP09668 335 aa8.87□□□□□ -0.99
PRKDC-205ENST00000535375 HCLS1P14317 486 aaPredicted RBP8.87□□□□□ -0.99
PRKDC-205ENST00000535375 RPS26P62854 115 aaKnown RBP8.87□□□□□ -0.99
PRKDC-205ENST00000535375 ERVK-24P63145 666 aa8.87□□□□□ -0.99
PRKDC-205ENST00000535375 LRP8Q14114 963 aa8.87□□□□□ -0.99
PRKDC-205ENST00000535375 TTLL4Q14679 1199 aa8.87□□□□□ -0.99
PRKDC-205ENST00000535375 RASIP1Q5U651 963 aa8.87□□□□□ -0.99
PRKDC-205ENST00000535375 NOC4LQ9BVI4 516 aaKnown RBP8.87□□□□□ -0.99
PRKDC-205ENST00000535375 OSBPL1AQ9BXW6 950 aa8.87□□□□□ -0.99
PRKDC-205ENST00000535375 CACNA2D2Q9NY47 1150 aa8.87□□□□□ -0.99
PRKDC-205ENST00000535375 PRKAG2Q9UGJ0 569 aa8.87□□□□□ -0.99
PRKDC-205ENST00000535375 CSADQ9Y600 493 aa8.87□□□□□ -0.99
PRKDC-205ENST00000535375 DCDC2CA8MYV0 355 aa8.86□□□□□ -0.99
PRKDC-205ENST00000535375 GRIK1P39086 918 aa8.86□□□□□ -0.99
PRKDC-205ENST00000535375 LIG3P49916 1009 aa8.86□□□□□ -0.99
PRKDC-205ENST00000535375 PCOLCE2Q9UKZ9 415 aa8.86□□□□□ -0.99
PRKDC-205ENST00000535375 DUSP27Q5VZP5 1158 aa8.85□□□□□ -0.99
PRKDC-205ENST00000535375 ZAR1Q86SH2 424 aa8.85□□□□□ -0.99
PRKDC-205ENST00000535375 C12orf40Q86WS4 652 aa8.85□□□□□ -0.99
PRKDC-205ENST00000535375 ZDHHC13Q8IUH4 622 aa8.85□□□□□ -0.99
PRKDC-205ENST00000535375 RNF214Q8ND24 703 aa8.85□□□□□ -0.99
PRKDC-205ENST00000535375 METTL22Q9BUU2 404 aaPredicted RBP8.85□□□□□ -0.99
PRKDC-205ENST00000535375 LEMD3Q9Y2U8 911 aa8.85□□□□□ -0.99
PRKDC-205ENST00000535375 COBLO75128 1261 aa8.84□□□□□ -0.99
PRKDC-205ENST00000535375 TGFB1P01137 390 aa8.84□□□□□ -0.99
PRKDC-205ENST00000535375 F13BP05160 661 aa8.84□□□□□ -0.99
PRKDC-205ENST00000535375 AGMOQ6ZNB7 445 aa8.84□□□□□ -0.99
PRKDC-205ENST00000535375 HDXQ7Z353 690 aa8.84□□□□□ -0.99
PRKDC-205ENST00000535375 NBPF11Q86T75 865 aa8.84□□□□□ -0.99
PRKDC-205ENST00000535375 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.84□□□□□ -0.99
PRKDC-205ENST00000535375 MIR1-1HGQ9H1L0 117 aa8.84□□□□□ -0.99
PRKDC-205ENST00000535375 ZNF16P17020 682 aaPredicted RBP8.83□□□□□ -1
PRKDC-205ENST00000535375 SSTR4P31391 388 aa8.83□□□□□ -1
PRKDC-205ENST00000535375 ADMP35318 185 aa8.83□□□□□ -1
PRKDC-205ENST00000535375 CYP27A1Q02318 531 aa8.83□□□□□ -1
PRKDC-205ENST00000535375 PPM1JQ5JR12 505 aa8.83□□□□□ -1
PRKDC-205ENST00000535375 INTS5Q6P9B9 1019 aaKnown RBP8.83□□□□□ -1
PRKDC-205ENST00000535375 CDC37L1Q7L3B6 337 aa8.83□□□□□ -1
PRKDC-205ENST00000535375 PIM2Q9P1W9 311 aa8.83□□□□□ -1
PRKDC-205ENST00000535375 FANCGO15287 622 aa8.82□□□□□ -1
PRKDC-205ENST00000535375 DYNC1LI2O43237 492 aaPredicted RBP8.82□□□□□ -1
PRKDC-205ENST00000535375 CPSF6Q16630 551 aaKnown RBP eCLIP8.82□□□□□ -1
PRKDC-205ENST00000535375 RELL1Q8IUW5 271 aa8.82□□□□□ -1
PRKDC-205ENST00000535375 ISL2Q96A47 359 aa8.82□□□□□ -1
PRKDC-205ENST00000535375 C1GALT1Q9NS00 363 aa8.82□□□□□ -1
PRKDC-205ENST00000535375 PCMTD2Q9NV79 361 aa8.82□□□□□ -1
PRKDC-205ENST00000535375 PCDHB5Q9Y5E4 795 aa8.82□□□□□ -1
PRKDC-205ENST00000535375 PRAMEF27A3QJZ7 478 aa8.81□□□□□ -1
PRKDC-205ENST00000535375 PRR19A6NJB7 356 aa8.81□□□□□ -1
PRKDC-205ENST00000535375 NEFMP07197 916 aa8.81□□□□□ -1
PRKDC-205ENST00000535375 PTPN11Q06124 597 aaPredicted RBP8.81□□□□□ -1
PRKDC-205ENST00000535375 PWP1Q13610 501 aa8.81□□□□□ -1
PRKDC-205ENST00000535375 SEPT6Q14141 434 aa8.81□□□□□ -1
PRKDC-205ENST00000535375 SEZ6L2Q6UXD5 910 aa8.81□□□□□ -1
PRKDC-205ENST00000535375 KCT2Q8NC54 265 aa8.81□□□□□ -1
PRKDC-205ENST00000535375 GAL3ST3Q96A11 431 aa8.81□□□□□ -1
PRKDC-205ENST00000535375 TLR6Q9Y2C9 796 aa8.81□□□□□ -1
PRKDC-205ENST00000535375 SNCAIPQ9Y6H5 919 aa8.81□□□□□ -1
PRKDC-205ENST00000535375 FAM170BA6NMN3 283 aa8.8□□□□□ -1
PRKDC-205ENST00000535375 HYAL3O43820 417 aaPredicted RBP8.8□□□□□ -1
PRKDC-205ENST00000535375 TFE3P19532 575 aaPredicted RBP8.8□□□□□ -1
PRKDC-205ENST00000535375 CDK5R2Q13319 367 aa8.8□□□□□ -1
PRKDC-205ENST00000535375 INPP5AQ14642 412 aa8.8□□□□□ -1
PRKDC-205ENST00000535375 CYP27C1Q4G0S4 372 aa8.8□□□□□ -1
PRKDC-205ENST00000535375 LRFN4Q6PJG9 635 aa8.8□□□□□ -1
PRKDC-205ENST00000535375 SHISA5Q8N114 240 aa8.8□□□□□ -1
PRKDC-205ENST00000535375 ZNF507Q8TCN5 953 aa8.8□□□□□ -1
PRKDC-205ENST00000535375 JARID2Q92833 1246 aaPredicted RBP8.8□□□□□ -1
PRKDC-205ENST00000535375 PLPPR2Q96GM1 343 aa8.8□□□□□ -1
PRKDC-205ENST00000535375 CYP26A1O43174 497 aa8.79□□□□□ -1
PRKDC-205ENST00000535375 GBP2P32456 591 aaPredicted RBP8.79□□□□□ -1
PRKDC-205ENST00000535375 WIPI1Q5MNZ9 446 aaPredicted RBP8.79□□□□□ -1
PRKDC-205ENST00000535375 ZBTB37Q5TC79 503 aa8.79□□□□□ -1
PRKDC-205ENST00000535375 OGFOD3Q6PK18 319 aa8.79□□□□□ -1
PRKDC-205ENST00000535375 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.79□□□□□ -1
PRKDC-205ENST00000535375 PHC3Q8NDX5 983 aa8.79□□□□□ -1
PRKDC-205ENST00000535375 GATA6Q92908 595 aa8.79□□□□□ -1
PRKDC-205ENST00000535375 F6X3S4 739 aa8.78□□□□□ -1
PRKDC-205ENST00000535375 FAM87AP0C7U9 286 aa8.78□□□□□ -1
PRKDC-205ENST00000535375 ETF1P62495 437 aaKnown RBP8.78□□□□□ -1
PRKDC-205ENST00000535375 MRPL58Q14197 206 aaKnown RBP8.78□□□□□ -1
PRKDC-205ENST00000535375 TSNAXIP1Q2TAA8 658 aa8.78□□□□□ -1
PRKDC-205ENST00000535375 ZNF765Q7L2R6 523 aa8.78□□□□□ -1
PRKDC-205ENST00000535375 RSRP1Q9BUV0 290 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms