RNA–Protein interactions for RNA: ENST00000535147.5

DDB1-204, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 2,789 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-204ENST00000535147 PCDH11XQ9BZA7 1347 aa11.8□□□□□ -0.52
DDB1-204ENST00000535147 PCDH11YQ9BZA8 1340 aa11.8□□□□□ -0.52
DDB1-204ENST00000535147 VWA3AA6NCI4 1184 aa11.79□□□□□ -0.52
DDB1-204ENST00000535147 BTBD18B2RXH4 712 aa11.79□□□□□ -0.52
DDB1-204ENST00000535147 CDKL5O76039 1030 aa11.79□□□□□ -0.52
DDB1-204ENST00000535147 C4AP0C0L4 1744 aa11.79□□□□□ -0.52
DDB1-204ENST00000535147 C4BP0C0L5 1744 aa11.79□□□□□ -0.52
DDB1-204ENST00000535147 ITGA6P23229 1130 aa11.79□□□□□ -0.52
DDB1-204ENST00000535147 ADKP55263 362 aaKnown RBP11.79□□□□□ -0.52
DDB1-204ENST00000535147 MST1RQ04912 1400 aa11.79□□□□□ -0.52
DDB1-204ENST00000535147 TRIM29Q14134 588 aa11.79□□□□□ -0.52
DDB1-204ENST00000535147 TMEM67Q5HYA8 995 aa11.79□□□□□ -0.52
DDB1-204ENST00000535147 CPLX2Q6PUV4 134 aaKnown RBP11.79□□□□□ -0.52
DDB1-204ENST00000535147 GRAMD1CQ8IYS0 662 aa11.79□□□□□ -0.52
DDB1-204ENST00000535147 KCNJ14Q9UNX9 436 aa11.79□□□□□ -0.52
DDB1-204ENST00000535147 RIPOR2Q9Y4F9 1068 aa11.79□□□□□ -0.52
DDB1-204ENST00000535147 PARP3Q9Y6F1 533 aa11.79□□□□□ -0.52
DDB1-204ENST00000535147 RIC1Q4ADV7 1423 aa11.79□□□□□ -0.52
DDB1-204ENST00000535147 ERVV-2B6SEH9 535 aa11.79□□□□□ -0.52
DDB1-204ENST00000535147 SEC31AO94979 1220 aaKnown RBP11.79□□□□□ -0.52
DDB1-204ENST00000535147 CSF1RP07333 972 aa11.79□□□□□ -0.52
DDB1-204ENST00000535147 TRHP20396 242 aaPredicted RBP11.79□□□□□ -0.52
DDB1-204ENST00000535147 PHKA1P46020 1223 aa11.79□□□□□ -0.52
DDB1-204ENST00000535147 CTDSPL2Q05D32 466 aa11.79□□□□□ -0.52
DDB1-204ENST00000535147 FMR1Q06787 632 aaKnown RBP eCLIP11.79□□□□□ -0.523e-7■■■□□ 15.8
DDB1-204ENST00000535147 CMTR1Q8N1G2 835 aaKnown RBP11.79□□□□□ -0.52
DDB1-204ENST00000535147 WDR24Q96S15 920 aa11.79□□□□□ -0.52
DDB1-204ENST00000535147 LY9Q9HBG7 655 aa11.79□□□□□ -0.52
DDB1-204ENST00000535147 CNNM1Q9NRU3 951 aa11.79□□□□□ -0.52
DDB1-204ENST00000535147 PPP2R2CQ9Y2T4 447 aa11.79□□□□□ -0.52
DDB1-204ENST00000535147 PKD1L3Q7Z443 1732 aa11.79□□□□□ -0.52
DDB1-204ENST00000535147 KCPQ6ZWJ8 1503 aa11.79□□□□□ -0.52
DDB1-204ENST00000535147 CUTAO60888 179 aa11.79□□□□□ -0.52
DDB1-204ENST00000535147 NPM3O75607 178 aaKnown RBP11.79□□□□□ -0.52
DDB1-204ENST00000535147 PCCAP05165 728 aaPredicted RBP11.79□□□□□ -0.52
DDB1-204ENST00000535147 PRR29P0C7W0 189 aa11.79□□□□□ -0.52
DDB1-204ENST00000535147 ATP2B1P20020 1258 aa11.79□□□□□ -0.52
DDB1-204ENST00000535147 PLA2G4AP47712 749 aa11.79□□□□□ -0.52
DDB1-204ENST00000535147 HELBQ8NG08 1087 aaPredicted RBP11.79□□□□□ -0.52
DDB1-204ENST00000535147 ZKSCAN3Q9BRR0 538 aa11.79□□□□□ -0.52
DDB1-204ENST00000535147 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.79□□□□□ -0.52
DDB1-204ENST00000535147 ZSWIM5Q9P217 1185 aa11.79□□□□□ -0.52
DDB1-204ENST00000535147 TACC3Q9Y6A5 838 aa11.79□□□□□ -0.52
DDB1-204ENST00000535147 FAM237AA0A1B0GTK4 181 aa11.78□□□□□ -0.52
DDB1-204ENST00000535147 SNAP23O00161 211 aa11.78□□□□□ -0.52
DDB1-204ENST00000535147 TADA3O75528 432 aa11.78□□□□□ -0.52
DDB1-204ENST00000535147 PDE6AP16499 860 aa11.78□□□□□ -0.52
DDB1-204ENST00000535147 TOB1P50616 345 aaPredicted RBP11.78□□□□□ -0.52
DDB1-204ENST00000535147 DNAJC10Q8IXB1 793 aa11.78□□□□□ -0.52
DDB1-204ENST00000535147 ZBTB38Q8NAP3 1195 aaPredicted RBP11.78□□□□□ -0.52
DDB1-204ENST00000535147 TTLL11Q8NHH1 800 aa11.78□□□□□ -0.52
DDB1-204ENST00000535147 NFE2L3Q9Y4A8 694 aa11.78□□□□□ -0.52
DDB1-204ENST00000535147 POLR2DO15514 142 aaKnown RBP11.78□□□□□ -0.52
DDB1-204ENST00000535147 CCP110O43303 1012 aa11.78□□□□□ -0.52
DDB1-204ENST00000535147 GNG11P61952 73 aa11.78□□□□□ -0.52
DDB1-204ENST00000535147 MDM2Q00987 491 aaPredicted RBP11.78□□□□□ -0.52
DDB1-204ENST00000535147 DHX8Q14562 1220 aaKnown RBP11.78□□□□□ -0.52
DDB1-204ENST00000535147 HLFQ16534 295 aa11.78□□□□□ -0.52
DDB1-204ENST00000535147 TOGARAM2Q6ZUX3 1019 aa11.78□□□□□ -0.52
DDB1-204ENST00000535147 KRI1Q8N9T8 703 aaKnown RBP11.78□□□□□ -0.52
DDB1-204ENST00000535147 NOL10Q9BSC4 688 aaKnown RBP11.78□□□□□ -0.52
DDB1-204ENST00000535147 DESI2Q9BSY9 194 aa11.78□□□□□ -0.52
DDB1-204ENST00000535147 PRDM11Q9NQV5 511 aa11.78□□□□□ -0.52
DDB1-204ENST00000535147 MAN1B1Q9UKM7 699 aa11.78□□□□□ -0.52
DDB1-204ENST00000535147 IFIT3O14879 490 aaKnown RBP11.77□□□□□ -0.53
DDB1-204ENST00000535147 ARHGAP6O43182 974 aa11.77□□□□□ -0.53
DDB1-204ENST00000535147 RRP12Q5JTH9 1297 aaKnown RBP11.77□□□□□ -0.53
DDB1-204ENST00000535147 NOSTRINQ8IVI9 506 aa11.77□□□□□ -0.53
DDB1-204ENST00000535147 AIDAQ96BJ3 306 aa11.77□□□□□ -0.53
DDB1-204ENST00000535147 BAG1Q99933 345 aaPredicted RBP11.77□□□□□ -0.53
DDB1-204ENST00000535147 SERTAD1Q9UHV2 236 aa11.77□□□□□ -0.53
DDB1-204ENST00000535147 SLC12A7Q9Y666 1083 aa11.77□□□□□ -0.53
DDB1-204ENST00000535147 MYO5AQ9Y4I1 1855 aaKnown RBP11.77□□□□□ -0.53
DDB1-204ENST00000535147 DDX60Q8IY21 1712 aaKnown RBP11.77□□□□□ -0.53
DDB1-204ENST00000535147 ZRANB2O95218 330 aaKnown RBP eCLIP11.77□□□□□ -0.53
DDB1-204ENST00000535147 TUBB4AP04350 444 aa11.77□□□□□ -0.53
DDB1-204ENST00000535147 NR5A1Q13285 461 aa11.77□□□□□ -0.53
DDB1-204ENST00000535147 POSTNQ15063 836 aa11.77□□□□□ -0.53
DDB1-204ENST00000535147 TMCO3Q6UWJ1 677 aa11.77□□□□□ -0.53
DDB1-204ENST00000535147 USP49Q70CQ1 688 aa11.77□□□□□ -0.53
DDB1-204ENST00000535147 DIS3L2Q8IYB7 885 aaKnown RBP11.77□□□□□ -0.53
DDB1-204ENST00000535147 TC2NQ8N9U0 490 aa11.77□□□□□ -0.53
DDB1-204ENST00000535147 TMEM87BQ96K49 555 aa11.77□□□□□ -0.53
DDB1-204ENST00000535147 MED15Q96RN5 788 aa11.77□□□□□ -0.53
DDB1-204ENST00000535147 STRBPQ96SI9 672 aaKnown RBP11.77□□□□□ -0.53
DDB1-204ENST00000535147 EPB41L4AQ9HCS5 686 aaPredicted RBP11.77□□□□□ -0.53
DDB1-204ENST00000535147 TOMM22Q9NS69 142 aa11.77□□□□□ -0.53
DDB1-204ENST00000535147 ADAMTSL3P82987 1691 aa11.77□□□□□ -0.53
DDB1-204ENST00000535147 POLR3GO15318 223 aaPredicted RBP11.76□□□□□ -0.53
DDB1-204ENST00000535147 ZSCAN12O43309 604 aa11.76□□□□□ -0.53
DDB1-204ENST00000535147 SSRP1Q08945 709 aaKnown RBP11.76□□□□□ -0.53
DDB1-204ENST00000535147 UBE3CQ15386 1083 aa11.76□□□□□ -0.53
DDB1-204ENST00000535147 KIF6Q6ZMV9 814 aa11.76□□□□□ -0.53
DDB1-204ENST00000535147 SEC31BQ9NQW1 1179 aa11.76□□□□□ -0.53
DDB1-204ENST00000535147 SAMSN1Q9NSI8 373 aaKnown RBP11.76□□□□□ -0.53
DDB1-204ENST00000535147 ASAP1Q9ULH1 1129 aa11.76□□□□□ -0.53
DDB1-204ENST00000535147 AKAP11Q9UKA4 1901 aa11.76□□□□□ -0.53
DDB1-204ENST00000535147 ZNF142P52746 1687 aaPredicted RBP11.76□□□□□ -0.53
DDB1-204ENST00000535147 TBX2Q13207 712 aaPredicted RBP11.76□□□□□ -0.53
DDB1-204ENST00000535147 TRIM28Q13263 835 aaKnown RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms