RNA–Protein interactions for RNA: ENST00000534885.5

TNFRSF1A-205, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best)

Gene TNFRSF1A, Length 2,069 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-205ENST00000534885 KIAA0825Q8IV33 1275 aa24.03■■□□□ 1.44
TNFRSF1A-205ENST00000534885 TGFBRAP1Q8WUH2 860 aa24.03■■□□□ 1.44
TNFRSF1A-205ENST00000534885 INTS4Q96HW7 963 aaKnown RBP24.03■■□□□ 1.44
TNFRSF1A-205ENST00000534885 GPHNQ9NQX3 736 aaPredicted RBP24.03■■□□□ 1.44
TNFRSF1A-205ENST00000534885 SH2B1Q9NRF2 756 aaPredicted RBP24.03■■□□□ 1.44
TNFRSF1A-205ENST00000534885 USP5P45974 858 aa24.03■■□□□ 1.44
TNFRSF1A-205ENST00000534885 MFSD6Q6ZSS7 791 aa24.03■■□□□ 1.44
TNFRSF1A-205ENST00000534885 CYB5R4Q7L1T6 521 aa24.03■■□□□ 1.44
TNFRSF1A-205ENST00000534885 NECAB1Q8N987 351 aa24.03■■□□□ 1.44
TNFRSF1A-205ENST00000534885 NAV1Q8NEY1 1877 aa24.03■■□□□ 1.44
TNFRSF1A-205ENST00000534885 CERS3Q8IU89 383 aa24.02■■□□□ 1.44
TNFRSF1A-205ENST00000534885 CCDC83Q8IWF9 413 aa24.02■■□□□ 1.44
TNFRSF1A-205ENST00000534885 MCM9Q9NXL9 1143 aa24.01■■□□□ 1.43
TNFRSF1A-205ENST00000534885 NFKBIEO00221 500 aa24.01■■□□□ 1.43
TNFRSF1A-205ENST00000534885 USP17L8P0C7I0 530 aa24.01■■□□□ 1.43
TNFRSF1A-205ENST00000534885 CYP2D6P10635 497 aa24.01■■□□□ 1.43
TNFRSF1A-205ENST00000534885 IARSP41252 1262 aaKnown RBP24.01■■□□□ 1.43
TNFRSF1A-205ENST00000534885 SLC4A8Q2Y0W8 1093 aa24.01■■□□□ 1.43
TNFRSF1A-205ENST00000534885 TEX11Q8IYF3 940 aa24.01■■□□□ 1.43
TNFRSF1A-205ENST00000534885 TAOK3Q9H2K8 898 aa24.01■■□□□ 1.43
TNFRSF1A-205ENST00000534885 ARPP21Q9UBL0 812 aaPredicted RBP24.01■■□□□ 1.43
TNFRSF1A-205ENST00000534885 KDM4AO75164 1064 aa24■■□□□ 1.43
TNFRSF1A-205ENST00000534885 PLCG2P16885 1265 aa24■■□□□ 1.43
TNFRSF1A-205ENST00000534885 APOBRQ0VD83 1088 aa24■■□□□ 1.43
TNFRSF1A-205ENST00000534885 STK3Q13188 491 aa24■■□□□ 1.43
TNFRSF1A-205ENST00000534885 RRP12Q5JTH9 1297 aaKnown RBP24■■□□□ 1.43
TNFRSF1A-205ENST00000534885 MAPKAPK5Q8IW41 473 aa24■■□□□ 1.43
TNFRSF1A-205ENST00000534885 TEKT1Q969V4 418 aa24■■□□□ 1.43
TNFRSF1A-205ENST00000534885 VPS33BQ9H267 617 aa24■■□□□ 1.43
TNFRSF1A-205ENST00000534885 CNNM2Q9H8M5 875 aa24■■□□□ 1.43
TNFRSF1A-205ENST00000534885 TOMM22Q9NS69 142 aa24■■□□□ 1.43
TNFRSF1A-205ENST00000534885 HHIPL2Q6UWX4 724 aa23.99■■□□□ 1.43
TNFRSF1A-205ENST00000534885 FBXL16Q8N461 479 aa23.99■■□□□ 1.43
TNFRSF1A-205ENST00000534885 RNF41Q9H4P4 317 aaPredicted RBP23.99■■□□□ 1.43
TNFRSF1A-205ENST00000534885 CWC22Q9HCG8 908 aaKnown RBP23.99■■□□□ 1.43
TNFRSF1A-205ENST00000534885 CIZ1Q9ULV3 898 aaPredicted RBP23.99■■□□□ 1.43
TNFRSF1A-205ENST00000534885 FOCADQ5VW36 1801 aa23.99■■□□□ 1.43
TNFRSF1A-205ENST00000534885 DTNBO60941 627 aa23.99■■□□□ 1.43
TNFRSF1A-205ENST00000534885 RAD17O75943 681 aa23.99■■□□□ 1.43
TNFRSF1A-205ENST00000534885 SBK1Q52WX2 424 aa23.99■■□□□ 1.43
TNFRSF1A-205ENST00000534885 KRT23Q9C075 422 aa23.99■■□□□ 1.43
TNFRSF1A-205ENST00000534885 ZSWIM5Q9P217 1185 aa23.99■■□□□ 1.43
TNFRSF1A-205ENST00000534885 WDR19Q8NEZ3 1342 aa23.99■■□□□ 1.43
TNFRSF1A-205ENST00000534885 DDX60LQ5H9U9 1706 aaKnown RBP23.98■■□□□ 1.43
TNFRSF1A-205ENST00000534885 CRKP46108 304 aa23.98■■□□□ 1.43
TNFRSF1A-205ENST00000534885 ARFGEF1Q9Y6D6 1849 aa23.98■■□□□ 1.43
TNFRSF1A-205ENST00000534885 PRKCSHP14314 528 aaPredicted RBP23.98■■□□□ 1.43
TNFRSF1A-205ENST00000534885 PCDHAC2Q9Y5I4 1007 aa23.98■■□□□ 1.43
TNFRSF1A-205ENST00000534885 FLT1P17948 1338 aa23.97■■□□□ 1.43
TNFRSF1A-205ENST00000534885 APOBEC3HQ6NTF7 200 aaKnown RBP23.97■■□□□ 1.43
TNFRSF1A-205ENST00000534885 NIM1KQ8IY84 436 aa23.97■■□□□ 1.43
TNFRSF1A-205ENST00000534885 PSMD14O00487 310 aa23.96■■□□□ 1.43
TNFRSF1A-205ENST00000534885 SAP30BPQ9UHR5 308 aaKnown RBP23.96■■□□□ 1.43
TNFRSF1A-205ENST00000534885 MYH1P12882 1939 aa23.96■■□□□ 1.43
TNFRSF1A-205ENST00000534885 PRDM1O75626 825 aa23.96■■□□□ 1.43
TNFRSF1A-205ENST00000534885 PKP1Q13835 747 aa23.96■■□□□ 1.43
TNFRSF1A-205ENST00000534885 C12orf60Q5U649 245 aa23.96■■□□□ 1.43
TNFRSF1A-205ENST00000534885 ZNRF3Q9ULT6 936 aa23.96■■□□□ 1.43
TNFRSF1A-205ENST00000534885 ECM29Q5VYK3 1845 aa23.95■■□□□ 1.43
TNFRSF1A-205ENST00000534885 FGRP09769 529 aa23.95■■□□□ 1.42
TNFRSF1A-205ENST00000534885 ZDHHC15Q96MV8 337 aa23.95■■□□□ 1.42
TNFRSF1A-205ENST00000534885 FHDC1Q9C0D6 1143 aaPredicted RBP23.95■■□□□ 1.42
TNFRSF1A-205ENST00000534885 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.95■■□□□ 1.42
TNFRSF1A-205ENST00000534885 SH2B2O14492 632 aaPredicted RBP23.95■■□□□ 1.42
TNFRSF1A-205ENST00000534885 CDC42EP5Q6NZY7 148 aa23.95■■□□□ 1.42
TNFRSF1A-205ENST00000534885 RSBN1LQ6PCB5 846 aaPredicted RBP23.95■■□□□ 1.42
TNFRSF1A-205ENST00000534885 IGDCC4Q8TDY8 1250 aa23.95■■□□□ 1.42
TNFRSF1A-205ENST00000534885 GTF3C6Q969F1 213 aa23.95■■□□□ 1.42
TNFRSF1A-205ENST00000534885 MRIQ9BWK5 157 aa23.95■■□□□ 1.42
TNFRSF1A-205ENST00000534885 BRPF3Q9ULD4 1205 aa23.95■■□□□ 1.42
TNFRSF1A-205ENST00000534885 ANGEL1Q9UNK9 670 aaKnown RBP23.95■■□□□ 1.42
TNFRSF1A-205ENST00000534885 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.95■■□□□ 1.42
TNFRSF1A-205ENST00000534885 VIL1P09327 827 aaKnown RBP23.94■■□□□ 1.42
TNFRSF1A-205ENST00000534885 EVCP57679 992 aa23.94■■□□□ 1.42
TNFRSF1A-205ENST00000534885 HDLBPQ00341 1268 aaKnown RBP23.94■■□□□ 1.42
TNFRSF1A-205ENST00000534885 RASSF7Q02833 373 aa23.94■■□□□ 1.42
TNFRSF1A-205ENST00000534885 SENP2Q9HC62 589 aa23.94■■□□□ 1.42
TNFRSF1A-205ENST00000534885 USP40Q9NVE5 1235 aa23.94■■□□□ 1.42
TNFRSF1A-205ENST00000534885 NAP1L2Q9ULW6 460 aaPredicted RBP23.94■■□□□ 1.42
TNFRSF1A-205ENST00000534885 WDHD1O75717 1129 aaPredicted RBP23.93■■□□□ 1.42
TNFRSF1A-205ENST00000534885 PDIA3P30101 505 aaKnown RBP23.93■■□□□ 1.42
TNFRSF1A-205ENST00000534885 PLCD1P51178 756 aa23.93■■□□□ 1.42
TNFRSF1A-205ENST00000534885 RBM5P52756 815 aaKnown RBP eCLIP23.93■■□□□ 1.42
TNFRSF1A-205ENST00000534885 SCRN1Q12765 414 aa23.93■■□□□ 1.42
TNFRSF1A-205ENST00000534885 TMEM87BQ96K49 555 aa23.93■■□□□ 1.42
TNFRSF1A-205ENST00000534885 ZKSCAN3Q9BRR0 538 aa23.93■■□□□ 1.42
TNFRSF1A-205ENST00000534885 SERPINA10Q9UK55 444 aa23.93■■□□□ 1.42
TNFRSF1A-205ENST00000534885 PICALMQ13492 652 aa23.93■■□□□ 1.42
TNFRSF1A-205ENST00000534885 ESR2Q92731 530 aa23.93■■□□□ 1.42
TNFRSF1A-205ENST00000534885 ZNF274Q96GC6 653 aaPredicted RBP23.93■■□□□ 1.42
TNFRSF1A-205ENST00000534885 DDX4Q9NQI0 724 aaKnown RBP23.93■■□□□ 1.42
TNFRSF1A-205ENST00000534885 SMC3Q9UQE7 1217 aa23.93■■□□□ 1.42
TNFRSF1A-205ENST00000534885 ZBTB12Q9Y330 459 aaPredicted RBP23.93■■□□□ 1.42
TNFRSF1A-205ENST00000534885 KLF18A0A0U1RQI7 1052 aa23.92■■□□□ 1.42
TNFRSF1A-205ENST00000534885 PFKFB2O60825 505 aa23.92■■□□□ 1.42
TNFRSF1A-205ENST00000534885 POLR3DP05423 398 aaPredicted RBP23.92■■□□□ 1.42
TNFRSF1A-205ENST00000534885 PCP11498 1178 aaKnown RBP23.92■■□□□ 1.42
TNFRSF1A-205ENST00000534885 RAB3GAP1Q15042 981 aa23.92■■□□□ 1.42
TNFRSF1A-205ENST00000534885 DYNLL2Q96FJ2 89 aa23.92■■□□□ 1.42
TNFRSF1A-205ENST00000534885 ROBO3Q96MS0 1386 aa23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms