RNA–Protein interactions for RNA: ENST00000534763.1

CCS-209, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 777 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-209ENST00000534763 SLC9C2Q5TAH2 1124 aa15.67■□□□□ 0.1
CCS-209ENST00000534763 SPRYD7Q5W111 196 aa15.67■□□□□ 0.1
CCS-209ENST00000534763 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.67■□□□□ 0.1
CCS-209ENST00000534763 ZFPM1Q8IX07 1006 aa15.67■□□□□ 0.1
CCS-209ENST00000534763 TEX11Q8IYF3 940 aa15.67■□□□□ 0.1
CCS-209ENST00000534763 CSRNP1Q96S65 589 aa15.67■□□□□ 0.1
CCS-209ENST00000534763 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.67■□□□□ 0.11e-8■■■■■ 29.7
CCS-209ENST00000534763 DHX36Q9H2U1 1008 aaKnown RBP15.67■□□□□ 0.1
CCS-209ENST00000534763 DDX4Q9NQI0 724 aaKnown RBP15.67■□□□□ 0.1
CCS-209ENST00000534763 AATFQ9NY61 560 aaKnown RBP eCLIP15.67■□□□□ 0.1
CCS-209ENST00000534763 DOCK2Q92608 1830 aa15.66■□□□□ 0.1
CCS-209ENST00000534763 ERC2O15083 957 aa15.66■□□□□ 0.1
CCS-209ENST00000534763 PDE6AP16499 860 aa15.66■□□□□ 0.1
CCS-209ENST00000534763 TM4SF4P48230 202 aa15.66■□□□□ 0.1
CCS-209ENST00000534763 ANKRD45Q5TZF3 282 aa15.66■□□□□ 0.1
CCS-209ENST00000534763 SH3BP5LQ7L8J4 393 aa15.66■□□□□ 0.1
CCS-209ENST00000534763 SH3RF3Q8TEJ3 882 aaPredicted RBP15.66■□□□□ 0.1
CCS-209ENST00000534763 OSBPL5Q9H0X9 879 aaPredicted RBP15.66■□□□□ 0.1
CCS-209ENST00000534763 SAGE1Q9NXZ1 904 aa15.66■□□□□ 0.1
CCS-209ENST00000534763 FZD1Q9UP38 647 aa15.66■□□□□ 0.1
CCS-209ENST00000534763 CSADQ9Y600 493 aa15.66■□□□□ 0.1
CCS-209ENST00000534763 TCRBV5S4A2TA0A5A2 114 aa15.65■□□□□ 0.1
CCS-209ENST00000534763 GLRX3O76003 335 aaKnown RBP15.65■□□□□ 0.1
CCS-209ENST00000534763 CTCFP49711 727 aaPredicted RBP15.65■□□□□ 0.1
CCS-209ENST00000534763 SREBF2Q12772 1141 aa15.65■□□□□ 0.1
CCS-209ENST00000534763 PICALMQ13492 652 aa15.65■□□□□ 0.1
CCS-209ENST00000534763 VGLL4Q14135 290 aa15.65■□□□□ 0.1
CCS-209ENST00000534763 ZSCAN25Q6NSZ9 544 aa15.65■□□□□ 0.1
CCS-209ENST00000534763 ZSCAN29Q8IWY8 852 aaPredicted RBP15.65■□□□□ 0.1
CCS-209ENST00000534763 WNK4Q96J92 1243 aa15.65■□□□□ 0.1
CCS-209ENST00000534763 CLMNQ96JQ2 1002 aa15.65■□□□□ 0.1
CCS-209ENST00000534763 WRNIP1Q96S55 665 aa15.65■□□□□ 0.1
CCS-209ENST00000534763 ZIC5Q96T25 663 aa15.65■□□□□ 0.1
CCS-209ENST00000534763 BCL11AQ9H165 835 aa15.65■□□□□ 0.1
CCS-209ENST00000534763 SALL3Q9BXA9 1300 aa15.65■□□□□ 0.1
CCS-209ENST00000534763 DDTLA6NHG4 134 aaPredicted RBP15.64■□□□□ 0.09
CCS-209ENST00000534763 MANSC4A6NHS7 340 aaPredicted RBP15.64■□□□□ 0.09
CCS-209ENST00000534763 MX1P20591 662 aa15.64■□□□□ 0.09
CCS-209ENST00000534763 ADD2P35612 726 aa15.64■□□□□ 0.09
CCS-209ENST00000534763 UBE3CQ15386 1083 aa15.64■□□□□ 0.09
CCS-209ENST00000534763 NOL9Q5SY16 702 aaKnown RBP15.64■□□□□ 0.09
CCS-209ENST00000534763 MIGA2Q7L4E1 593 aa15.64■□□□□ 0.09
CCS-209ENST00000534763 RIOK1Q9BRS2 568 aaKnown RBP15.64■□□□□ 0.09
CCS-209ENST00000534763 STAP2Q9UGK3 403 aa15.64■□□□□ 0.09
CCS-209ENST00000534763 FLT1P17948 1338 aa15.64■□□□□ 0.09
CCS-209ENST00000534763 ZNF532Q9HCE3 1301 aa15.64■□□□□ 0.09
CCS-209ENST00000534763 SPDYE5A6NIY4 337 aa15.63■□□□□ 0.09
CCS-209ENST00000534763 PHF20L1A8MW92 1017 aa15.63■□□□□ 0.09
CCS-209ENST00000534763 FOXN1O15353 648 aa15.63■□□□□ 0.09
CCS-209ENST00000534763 IGHDP01880 384 aa15.63■□□□□ 0.09
CCS-209ENST00000534763 METTL16Q86W50 562 aaKnown RBP15.63■□□□□ 0.09
CCS-209ENST00000534763 TICAM2Q86XR7 235 aa15.63■□□□□ 0.09
CCS-209ENST00000534763 ERO1BQ86YB8 467 aa15.63■□□□□ 0.09
CCS-209ENST00000534763 KBTBD3Q8NAB2 608 aa15.63■□□□□ 0.09
CCS-209ENST00000534763 PI4K2BQ8TCG2 481 aa15.63■□□□□ 0.09
CCS-209ENST00000534763 TGFBRAP1Q8WUH2 860 aa15.63■□□□□ 0.09
CCS-209ENST00000534763 EDC3Q96F86 508 aaKnown RBP15.63■□□□□ 0.09
CCS-209ENST00000534763 PRDM10Q9NQV6 1147 aa15.63■□□□□ 0.09
CCS-209ENST00000534763 PI4KBQ9UBF8 816 aa15.63■□□□□ 0.09
CCS-209ENST00000534763 HERC5Q9UII4 1024 aaKnown RBP15.63■□□□□ 0.09
CCS-209ENST00000534763 MAGEB6P1A0A0J9YX57 407 aa15.62■□□□□ 0.09
CCS-209ENST00000534763 TESPA1A2RU30 521 aaPredicted RBP15.62■□□□□ 0.09
CCS-209ENST00000534763 DYNLL1P63167 89 aaKnown RBP15.62■□□□□ 0.09
CCS-209ENST00000534763 LRRFIP1Q32MZ4 808 aaKnown RBP15.62■□□□□ 0.09
CCS-209ENST00000534763 FOXP4Q8IVH2 680 aaPredicted RBP15.62■□□□□ 0.09
CCS-209ENST00000534763 MIGA1Q8NAN2 632 aa15.62■□□□□ 0.09
CCS-209ENST00000534763 OPTNQ96CV9 577 aa15.62■□□□□ 0.09
CCS-209ENST00000534763 TAOK2Q9UL54 1235 aa15.62■□□□□ 0.09
CCS-209ENST00000534763 SNCAIPQ9Y6H5 919 aa15.62■□□□□ 0.09
CCS-209ENST00000534763 CTNND1O60716 968 aaKnown RBP15.61■□□□□ 0.09
CCS-209ENST00000534763 ALDH1A1P00352 501 aa15.61■□□□□ 0.09
CCS-209ENST00000534763 ZFYP08048 801 aaPredicted RBP15.61■□□□□ 0.09
CCS-209ENST00000534763 NUCB1Q02818 461 aa15.61■□□□□ 0.09
CCS-209ENST00000534763 PPATQ06203 517 aa15.61■□□□□ 0.09
CCS-209ENST00000534763 ZKSCAN4Q969J2 545 aaPredicted RBP15.61■□□□□ 0.09
CCS-209ENST00000534763 CFHR5Q9BXR6 569 aa15.61■□□□□ 0.09
CCS-209ENST00000534763 CRNKL1Q9BZJ0 848 aaKnown RBP15.61■□□□□ 0.09
CCS-209ENST00000534763 ELP3Q9H9T3 547 aa15.61■□□□□ 0.09
CCS-209ENST00000534763 LAMB1P07942 1786 aa15.6■□□□□ 0.09
CCS-209ENST00000534763 HSPA8P11142 646 aaKnown RBP15.6■□□□□ 0.09
CCS-209ENST00000534763 GJA5P36382 358 aa15.6■□□□□ 0.09
CCS-209ENST00000534763 GTF2A2P52657 109 aa15.6■□□□□ 0.09
CCS-209ENST00000534763 PPIL2Q13356 520 aa15.6■□□□□ 0.09
CCS-209ENST00000534763 CHD1LQ86WJ1 897 aa15.6■□□□□ 0.09
CCS-209ENST00000534763 MAPKAPK5Q8IW41 473 aa15.6■□□□□ 0.09
CCS-209ENST00000534763 OTUD7AQ8TE49 926 aaPredicted RBP15.6■□□□□ 0.09
CCS-209ENST00000534763 RNF186Q9NXI6 227 aa15.6■□□□□ 0.09
CCS-209ENST00000534763 MYO5AQ9Y4I1 1855 aaKnown RBP15.59■□□□□ 0.09
CCS-209ENST00000534763 OTOFQ9HC10 1997 aa15.59■□□□□ 0.09
CCS-209ENST00000534763 HLA-DOAP06340 250 aa15.59■□□□□ 0.09
CCS-209ENST00000534763 INPP5BP32019 993 aa15.59■□□□□ 0.09
CCS-209ENST00000534763 USP5P45974 858 aa15.59■□□□□ 0.09
CCS-209ENST00000534763 PDE1AP54750 535 aa15.59■□□□□ 0.09
CCS-209ENST00000534763 NOM1Q5C9Z4 860 aaKnown RBP15.59■□□□□ 0.09
CCS-209ENST00000534763 TSHZ3Q63HK5 1081 aa15.59■□□□□ 0.09
CCS-209ENST00000534763 SCYL3Q8IZE3 742 aa15.59■□□□□ 0.09
CCS-209ENST00000534763 MS4A4AQ96JQ5 239 aa15.59■□□□□ 0.09
CCS-209ENST00000534763 EHD4Q9H223 541 aa15.59■□□□□ 0.09
CCS-209ENST00000534763 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.59■□□□□ 0.09
CCS-209ENST00000534763 MKRN3Q13064 507 aaKnown RBP15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms