RNA–Protein interactions for RNA: ENST00000534716.2

NDUFS3-213, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 2 BASIC

Gene NDUFS3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-213ENST00000534716 NSUN4Q96CB9 384 aaKnown RBP23.19■■□□□ 1.3
NDUFS3-213ENST00000534716 PTPN22Q9Y2R2 807 aa23.19■■□□□ 1.3
NDUFS3-213ENST00000534716 TLR2O60603 784 aa23.18■■□□□ 1.3
NDUFS3-213ENST00000534716 LDHCP07864 332 aa23.18■■□□□ 1.3
NDUFS3-213ENST00000534716 MCAMP43121 646 aa23.18■■□□□ 1.3
NDUFS3-213ENST00000534716 RHBDL3P58872 404 aa23.18■■□□□ 1.3
NDUFS3-213ENST00000534716 TNNI3KQ59H18 835 aa23.18■■□□□ 1.3
NDUFS3-213ENST00000534716 PI16Q6UXB8 463 aa23.18■■□□□ 1.3
NDUFS3-213ENST00000534716 ITPRIPQ8IWB1 547 aa23.18■■□□□ 1.3
NDUFS3-213ENST00000534716 EFCC1Q9HA90 598 aa23.18■■□□□ 1.3
NDUFS3-213ENST00000534716 DDX4Q9NQI0 724 aaKnown RBP23.18■■□□□ 1.3
NDUFS3-213ENST00000534716 FPGT-TNNI3KV9GXZ4 949 aa23.18■■□□□ 1.3
NDUFS3-213ENST00000534716 CAP1Q01518 475 aa23.17■■□□□ 1.3
NDUFS3-213ENST00000534716 ZNF512BQ96KM6 892 aaPredicted RBP23.17■■□□□ 1.3
NDUFS3-213ENST00000534716 MYH2Q9UKX2 1941 aa23.17■■□□□ 1.3
NDUFS3-213ENST00000534716 IGSF3O75054 1194 aa23.16■■□□□ 1.3
NDUFS3-213ENST00000534716 ARHGEF6Q15052 776 aa23.16■■□□□ 1.3
NDUFS3-213ENST00000534716 TBC1D9Q6ZT07 1266 aa23.16■■□□□ 1.3
NDUFS3-213ENST00000534716 ANKRD23Q86SG2 305 aa23.16■■□□□ 1.3
NDUFS3-213ENST00000534716 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.16■■□□□ 1.3
NDUFS3-213ENST00000534716 C1orf115Q9H7X2 142 aa23.16■■□□□ 1.3
NDUFS3-213ENST00000534716 DDTLA6NHG4 134 aaPredicted RBP23.15■■□□□ 1.3
NDUFS3-213ENST00000534716 CXCL11O14625 94 aa23.15■■□□□ 1.3
NDUFS3-213ENST00000534716 SURF6O75683 361 aaKnown RBP23.15■■□□□ 1.3
NDUFS3-213ENST00000534716 MOGSQ13724 837 aa23.15■■□□□ 1.3
NDUFS3-213ENST00000534716 CENPFP49454 3210 aa23.15■■□□□ 1.3
NDUFS3-213ENST00000534716 COL2A1P02458 1487 aaPredicted RBP23.14■■□□□ 1.29
NDUFS3-213ENST00000534716 TBC1D12O60347 775 aa23.14■■□□□ 1.29
NDUFS3-213ENST00000534716 OS9Q13438 667 aaPredicted RBP23.14■■□□□ 1.29
NDUFS3-213ENST00000534716 CCDC158Q5M9N0 1113 aa23.14■■□□□ 1.29
NDUFS3-213ENST00000534716 SCYL3Q8IZE3 742 aa23.14■■□□□ 1.29
NDUFS3-213ENST00000534716 PICALMQ13492 652 aa23.13■■□□□ 1.29
NDUFS3-213ENST00000534716 ZSCAN29Q8IWY8 852 aaPredicted RBP23.13■■□□□ 1.29
NDUFS3-213ENST00000534716 ARMC5Q96C12 935 aa23.13■■□□□ 1.29
NDUFS3-213ENST00000534716 DBNDD2Q9BQY9 259 aa23.13■■□□□ 1.29
NDUFS3-213ENST00000534716 RAI14Q9P0K7 980 aa23.13■■□□□ 1.29
NDUFS3-213ENST00000534716 CTNND1O60716 968 aaKnown RBP23.12■■□□□ 1.29
NDUFS3-213ENST00000534716 TTC39AQ5SRH9 613 aa23.12■■□□□ 1.29
NDUFS3-213ENST00000534716 CEP85Q6P2H3 762 aa23.12■■□□□ 1.29
NDUFS3-213ENST00000534716 C17orf99Q6UX52 265 aa23.12■■□□□ 1.29
NDUFS3-213ENST00000534716 LRP2BPQ9P2M1 347 aa23.12■■□□□ 1.29
NDUFS3-213ENST00000534716 DOCK2Q92608 1830 aa23.11■■□□□ 1.29
NDUFS3-213ENST00000534716 PTPRAP18433 802 aa23.11■■□□□ 1.29
NDUFS3-213ENST00000534716 PICK1Q9NRD5 415 aa23.11■■□□□ 1.29
NDUFS3-213ENST00000534716 AFG3L2Q9Y4W6 797 aa23.11■■□□□ 1.29
NDUFS3-213ENST00000534716 ADGRA2Q96PE1 1338 aa23.1■■□□□ 1.29
NDUFS3-213ENST00000534716 PDE4DIPQ5VU43 2346 aa23.1■■□□□ 1.29
NDUFS3-213ENST00000534716 PDHXO00330 501 aa23.1■■□□□ 1.29
NDUFS3-213ENST00000534716 GNRH1P01148 92 aa23.1■■□□□ 1.29
NDUFS3-213ENST00000534716 MS4A1P11836 297 aa23.1■■□□□ 1.29
NDUFS3-213ENST00000534716 LACTBP83111 547 aaPredicted RBP23.1■■□□□ 1.29
NDUFS3-213ENST00000534716 ZHX2Q9Y6X8 837 aa23.1■■□□□ 1.29
NDUFS3-213ENST00000534716 A0A0G2JLL6 359 aaPredicted RBP23.09■■□□□ 1.29
NDUFS3-213ENST00000534716 CYP2E1P05181 493 aaPredicted RBP23.09■■□□□ 1.29
NDUFS3-213ENST00000534716 PPP4CP60510 307 aa23.09■■□□□ 1.29
NDUFS3-213ENST00000534716 GPAT2Q6NUI2 795 aa23.09■■□□□ 1.29
NDUFS3-213ENST00000534716 PRRT2Q7Z6L0 340 aaPredicted RBP23.09■■□□□ 1.29
NDUFS3-213ENST00000534716 PANK1Q8TE04 598 aa23.09■■□□□ 1.29
NDUFS3-213ENST00000534716 OSBPL5Q9H0X9 879 aaPredicted RBP23.09■■□□□ 1.29
NDUFS3-213ENST00000534716 DBNLQ9UJU6 430 aaKnown RBP23.09■■□□□ 1.29
NDUFS3-213ENST00000534716 BRCA2P51587 3418 aa23.08■■□□□ 1.29
NDUFS3-213ENST00000534716 KIF22Q14807 665 aa23.08■■□□□ 1.29
NDUFS3-213ENST00000534716 NAA16Q6N069 864 aaPredicted RBP23.08■■□□□ 1.29
NDUFS3-213ENST00000534716 FASTKD5Q7L8L6 764 aaKnown RBP23.08■■□□□ 1.29
NDUFS3-213ENST00000534716 EAF2Q96CJ1 260 aaPredicted RBP23.08■■□□□ 1.29
NDUFS3-213ENST00000534716 SNRKQ9NRH2 765 aa23.08■■□□□ 1.29
NDUFS3-213ENST00000534716 BAG3O95817 575 aa23.07■■□□□ 1.28
NDUFS3-213ENST00000534716 PLCG2P16885 1265 aa23.07■■□□□ 1.28
NDUFS3-213ENST00000534716 ERC1Q8IUD2 1116 aa23.07■■□□□ 1.28
NDUFS3-213ENST00000534716 SLC45A1Q9Y2W3 748 aa23.07■■□□□ 1.28
NDUFS3-213ENST00000534716 AK9Q5TCS8 1911 aa23.07■■□□□ 1.28
NDUFS3-213ENST00000534716 SLURP2P0DP57 97 aa23.06■■□□□ 1.28
NDUFS3-213ENST00000534716 PRMT2P55345 433 aa23.06■■□□□ 1.28
NDUFS3-213ENST00000534716 TEX11Q8IYF3 940 aa23.06■■□□□ 1.28
NDUFS3-213ENST00000534716 NOL10Q9BSC4 688 aaKnown RBP23.06■■□□□ 1.28
NDUFS3-213ENST00000534716 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.06■■□□□ 1.28
NDUFS3-213ENST00000534716 ZAP70P43403 619 aa23.05■■□□□ 1.28
NDUFS3-213ENST00000534716 SH3RF3Q8TEJ3 882 aaPredicted RBP23.05■■□□□ 1.28
NDUFS3-213ENST00000534716 ZNF333Q96JL9 665 aa23.05■■□□□ 1.28
NDUFS3-213ENST00000534716 PARK7Q99497 189 aaKnown RBP23.05■■□□□ 1.28
NDUFS3-213ENST00000534716 ARHGAP39Q9C0H5 1083 aa23.05■■□□□ 1.28
NDUFS3-213ENST00000534716 CCDC8Q9H0W5 538 aaPredicted RBP23.05■■□□□ 1.28
NDUFS3-213ENST00000534716 TLR7Q9NYK1 1049 aaKnown RBP23.05■■□□□ 1.28
NDUFS3-213ENST00000534716 PTCH2Q9Y6C5 1203 aa23.05■■□□□ 1.28
NDUFS3-213ENST00000534716 HSP90AB4PQ58FF6 505 aa23.04■■□□□ 1.28
NDUFS3-213ENST00000534716 TMED8Q6PL24 325 aaPredicted RBP23.04■■□□□ 1.28
NDUFS3-213ENST00000534716 NBPF11Q86T75 865 aa23.04■■□□□ 1.28
NDUFS3-213ENST00000534716 DHX36Q9H2U1 1008 aaKnown RBP23.04■■□□□ 1.28
NDUFS3-213ENST00000534716 CPA4Q9UI42 421 aa23.04■■□□□ 1.28
NDUFS3-213ENST00000534716 HERC5Q9UII4 1024 aaKnown RBP23.04■■□□□ 1.28
NDUFS3-213ENST00000534716 MAST2Q6P0Q8 1798 aa23.04■■□□□ 1.28
NDUFS3-213ENST00000534716 ADGRA1Q86SQ6 560 aa23.03■■□□□ 1.28
NDUFS3-213ENST00000534716 TBC1D2Q9BYX2 928 aa23.03■■□□□ 1.28
NDUFS3-213ENST00000534716 PIH1D3Q9NQM4 214 aaKnown RBP23.03■■□□□ 1.28
NDUFS3-213ENST00000534716 AATFQ9NY61 560 aaKnown RBP eCLIP23.03■■□□□ 1.28
NDUFS3-213ENST00000534716 PI4KBQ9UBF8 816 aa23.03■■□□□ 1.28
NDUFS3-213ENST00000534716 POTEFA5A3E0 1075 aa23.02■■□□□ 1.28
NDUFS3-213ENST00000534716 BCRP11274 1271 aa23.02■■□□□ 1.28
NDUFS3-213ENST00000534716 CTGFP29279 349 aa23.02■■□□□ 1.28
NDUFS3-213ENST00000534716 SLC9C1Q4G0N8 1177 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms