RNA–Protein interactions for RNA: ENST00000534591.1

VPS51-216, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 5

Gene VPS51, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-216ENST00000534591 GRIK5Q16478 980 aa20.12■□□□□ 0.81
VPS51-216ENST00000534591 MFSD6Q6ZSS7 791 aa20.12■□□□□ 0.81
VPS51-216ENST00000534591 ZNF274Q96GC6 653 aaPredicted RBP20.12■□□□□ 0.81
VPS51-216ENST00000534591 LRRC2Q9BYS8 371 aa20.12■□□□□ 0.81
VPS51-216ENST00000534591 PFKFB2O60825 505 aa20.11■□□□□ 0.81
VPS51-216ENST00000534591 PDIA4P13667 645 aaKnown RBP20.11■□□□□ 0.81
VPS51-216ENST00000534591 PLCG2P16885 1265 aa20.11■□□□□ 0.81
VPS51-216ENST00000534591 ANTXR2P58335 489 aa20.11■□□□□ 0.81
VPS51-216ENST00000534591 CTDSPL2Q05D32 466 aa20.11■□□□□ 0.81
VPS51-216ENST00000534591 ST3GAL1Q11201 340 aa20.11■□□□□ 0.81
VPS51-216ENST00000534591 AOC3Q16853 763 aa20.11■□□□□ 0.81
VPS51-216ENST00000534591 CLEC17AQ6ZS10 378 aa20.11■□□□□ 0.81
VPS51-216ENST00000534591 NECAB1Q8N987 351 aa20.11■□□□□ 0.81
VPS51-216ENST00000534591 TMEM87BQ96K49 555 aa20.11■□□□□ 0.81
VPS51-216ENST00000534591 GBP4Q96PP9 640 aa20.11■□□□□ 0.81
VPS51-216ENST00000534591 MTA3Q9BTC8 594 aa20.11■□□□□ 0.81
VPS51-216ENST00000534591 MYH2Q9UKX2 1941 aa20.11■□□□□ 0.81
VPS51-216ENST00000534591 SCN9AQ15858 1988 aa20.1■□□□□ 0.81
VPS51-216ENST00000534591 GPR75-ASB3A0A0A6YYF3 556 aa20.1■□□□□ 0.81
VPS51-216ENST00000534591 DOK7Q18PE1 504 aa20.1■□□□□ 0.81
VPS51-216ENST00000534591 SBK1Q52WX2 424 aa20.1■□□□□ 0.81
VPS51-216ENST00000534591 GTF3C6Q969F1 213 aa20.1■□□□□ 0.81
VPS51-216ENST00000534591 DCP1AQ9NPI6 582 aaPredicted RBP20.1■□□□□ 0.81
VPS51-216ENST00000534591 FZD9O00144 591 aa20.09■□□□□ 0.81
VPS51-216ENST00000534591 FKBP1AP62942 108 aaKnown RBP20.09■□□□□ 0.81
VPS51-216ENST00000534591 APOBRQ0VD83 1088 aa20.09■□□□□ 0.81
VPS51-216ENST00000534591 DIXDC1Q155Q3 683 aa20.09■□□□□ 0.81
VPS51-216ENST00000534591 CHST3Q7LGC8 479 aa20.09■□□□□ 0.81
VPS51-216ENST00000534591 GAKO14976 1311 aa20.09■□□□□ 0.81
VPS51-216ENST00000534591 NEDD4P46934 1319 aa20.09■□□□□ 0.81
VPS51-216ENST00000534591 B4E1Z4 1266 aa20.08■□□□□ 0.81
VPS51-216ENST00000534591 PPIP5K2O43314 1243 aa20.08■□□□□ 0.81
VPS51-216ENST00000534591 TOMM70O94826 608 aa20.08■□□□□ 0.81
VPS51-216ENST00000534591 MCM4P33991 863 aa20.08■□□□□ 0.81
VPS51-216ENST00000534591 KIAA2012Q0VF49 1180 aa20.08■□□□□ 0.81
VPS51-216ENST00000534591 DPY19L2Q6NUT2 758 aa20.08■□□□□ 0.81
VPS51-216ENST00000534591 CTR9Q6PD62 1173 aa20.08■□□□□ 0.81
VPS51-216ENST00000534591 LARGE2Q8N3Y3 721 aa20.08■□□□□ 0.81
VPS51-216ENST00000534591 LLPHQ9BRT6 129 aaKnown RBP20.08■□□□□ 0.81
VPS51-216ENST00000534591 ARPP21Q9UBL0 812 aaPredicted RBP20.08■□□□□ 0.81
VPS51-216ENST00000534591 MINDY4BA8MYZ0 360 aa20.07■□□□□ 0.8
VPS51-216ENST00000534591 BRD1O95696 1058 aa20.07■□□□□ 0.8
VPS51-216ENST00000534591 CYB5R4Q7L1T6 521 aa20.07■□□□□ 0.8
VPS51-216ENST00000534591 ANGEL1Q9UNK9 670 aaKnown RBP20.07■□□□□ 0.8
VPS51-216ENST00000534591 ZDHHC9Q9Y397 364 aa20.07■□□□□ 0.8
VPS51-216ENST00000534591 WDR33Q9C0J8 1336 aaKnown RBP20.07■□□□□ 0.8
VPS51-216ENST00000534591 ADAMTSL1Q8N6G6 1762 aa20.07■□□□□ 0.8
VPS51-216ENST00000534591 PSME4Q14997 1843 aa20.07■□□□□ 0.8
VPS51-216ENST00000534591 USP17L12C9JPN9 530 aa20.07■□□□□ 0.8
VPS51-216ENST00000534591 USP17L21D6R901 530 aa20.07■□□□□ 0.8
VPS51-216ENST00000534591 SLC3A2P08195 630 aaKnown RBP20.07■□□□□ 0.8
VPS51-216ENST00000534591 GJB2P29033 226 aa20.07■□□□□ 0.8
VPS51-216ENST00000534591 PDIA3P30101 505 aaKnown RBP20.07■□□□□ 0.8
VPS51-216ENST00000534591 USP5P45974 858 aa20.07■□□□□ 0.8
VPS51-216ENST00000534591 NT5C2P49902 561 aa20.07■□□□□ 0.8
VPS51-216ENST00000534591 STK3Q13188 491 aa20.07■□□□□ 0.8
VPS51-216ENST00000534591 SH3RF3Q8TEJ3 882 aaPredicted RBP20.07■□□□□ 0.8
VPS51-216ENST00000534591 FBXW7Q969H0 707 aa20.07■□□□□ 0.8
VPS51-216ENST00000534591 BAZ2AQ9UIF9 1905 aaKnown RBP20.06■□□□□ 0.8
VPS51-216ENST00000534591 SH2B2O14492 632 aaPredicted RBP20.06■□□□□ 0.8
VPS51-216ENST00000534591 ECE2O60344 883 aa20.06■□□□□ 0.8
VPS51-216ENST00000534591 FGRP09769 529 aa20.06■□□□□ 0.8
VPS51-216ENST00000534591 VEGFAP15692 232 aaPredicted RBP20.06■□□□□ 0.8
VPS51-216ENST00000534591 PDCP20941 246 aa20.06■□□□□ 0.8
VPS51-216ENST00000534591 BTDP43251 543 aa20.06■□□□□ 0.8
VPS51-216ENST00000534591 PKP1Q13835 747 aa20.06■□□□□ 0.8
VPS51-216ENST00000534591 STRIP1Q5VSL9 837 aa20.06■□□□□ 0.8
VPS51-216ENST00000534591 JDP2Q8WYK2 163 aa20.06■□□□□ 0.8
VPS51-216ENST00000534591 VPS33BQ9H267 617 aa20.06■□□□□ 0.8
VPS51-216ENST00000534591 DBNDD1Q9H9R9 158 aa20.06■□□□□ 0.8
VPS51-216ENST00000534591 ZSWIM5Q9P217 1185 aa20.06■□□□□ 0.8
VPS51-216ENST00000534591 MKRN1Q9UHC7 482 aaKnown RBP20.06■□□□□ 0.8
VPS51-216ENST00000534591 TACC3Q9Y6A5 838 aa20.06■□□□□ 0.8
VPS51-216ENST00000534591 ZNF646O15015 1829 aaPredicted RBP20.05■□□□□ 0.8
VPS51-216ENST00000534591 DDX11L8A8MPP1 907 aa20.05■□□□□ 0.8
VPS51-216ENST00000534591 KDM4AO75164 1064 aa20.05■□□□□ 0.8
VPS51-216ENST00000534591 SART3Q15020 963 aaKnown RBP20.05■□□□□ 0.8
VPS51-216ENST00000534591 CERS5Q8N5B7 392 aa20.05■□□□□ 0.8
VPS51-216ENST00000534591 ESR2Q92731 530 aa20.05■□□□□ 0.8
VPS51-216ENST00000534591 LAMB1P07942 1786 aa20.04■□□□□ 0.8
VPS51-216ENST00000534591 POTEIP0CG38 1075 aa20.04■□□□□ 0.8
VPS51-216ENST00000534591 POTEJP0CG39 1038 aa20.04■□□□□ 0.8
VPS51-216ENST00000534591 PTMSP20962 102 aa20.04■□□□□ 0.8
VPS51-216ENST00000534591 LIFRP42702 1097 aa20.04■□□□□ 0.8
VPS51-216ENST00000534591 SCRN1Q12765 414 aa20.04■□□□□ 0.8
VPS51-216ENST00000534591 AMOTL1Q8IY63 956 aa20.04■□□□□ 0.8
VPS51-216ENST00000534591 IGDCC4Q8TDY8 1250 aa20.04■□□□□ 0.8
VPS51-216ENST00000534591 L3MBTL3Q96JM7 780 aaPredicted RBP20.04■□□□□ 0.8
VPS51-216ENST00000534591 MRIQ9BWK5 157 aa20.04■□□□□ 0.8
VPS51-216ENST00000534591 INCENPQ9NQS7 918 aa20.04■□□□□ 0.8
VPS51-216ENST00000534591 GPHNQ9NQX3 736 aaPredicted RBP20.04■□□□□ 0.8
VPS51-216ENST00000534591 TOMM22Q9NS69 142 aa20.04■□□□□ 0.8
VPS51-216ENST00000534591 KLF18A0A0U1RQI7 1052 aa20.03■□□□□ 0.8
VPS51-216ENST00000534591 USP17L3A6NCW0 530 aa20.03■□□□□ 0.8
VPS51-216ENST00000534591 USP17L4A6NCW7 530 aa20.03■□□□□ 0.8
VPS51-216ENST00000534591 ORC4O43929 436 aa20.03■□□□□ 0.8
VPS51-216ENST00000534591 DHX16O60231 1041 aaKnown RBP20.03■□□□□ 0.8
VPS51-216ENST00000534591 SYT1P21579 422 aa20.03■□□□□ 0.8
VPS51-216ENST00000534591 TMEM67Q5HYA8 995 aa20.03■□□□□ 0.8
VPS51-216ENST00000534591 HHIPL2Q6UWX4 724 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms