RNA–Protein interactions for RNA: ENST00000534300.5

AMBRA1-212, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 5,067 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-212ENST00000534300 LARGE2Q8N3Y3 721 aa13.61□□□□□ -0.23
AMBRA1-212ENST00000534300 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.61□□□□□ -0.23
AMBRA1-212ENST00000534300 NPC1L1Q9UHC9 1359 aa13.61□□□□□ -0.23
AMBRA1-212ENST00000534300 ZNF75DP51815 510 aa13.61□□□□□ -0.23
AMBRA1-212ENST00000534300 FAM160A1Q05DH4 1040 aa13.61□□□□□ -0.23
AMBRA1-212ENST00000534300 GRM1Q13255 1194 aa13.61□□□□□ -0.23
AMBRA1-212ENST00000534300 CCDC144CPQ8IYA2 1237 aa13.61□□□□□ -0.23
AMBRA1-212ENST00000534300 NKIRAS1Q9NYS0 192 aa13.61□□□□□ -0.23
AMBRA1-212ENST00000534300 ANAPC4Q9UJX5 808 aa13.61□□□□□ -0.23
AMBRA1-212ENST00000534300 VIMP08670 466 aaKnown RBP13.61□□□□□ -0.23
AMBRA1-212ENST00000534300 PPP4R3AQ6IN85 833 aa13.61□□□□□ -0.23
AMBRA1-212ENST00000534300 DNAJC10Q8IXB1 793 aa13.61□□□□□ -0.23
AMBRA1-212ENST00000534300 USP26Q9BXU7 913 aa13.61□□□□□ -0.23
AMBRA1-212ENST00000534300 TRIM75PA6NK02 468 aa13.61□□□□□ -0.23
AMBRA1-212ENST00000534300 ANXA1P04083 346 aa13.61□□□□□ -0.23
AMBRA1-212ENST00000534300 RUFY4Q6ZNE9 571 aa13.61□□□□□ -0.23
AMBRA1-212ENST00000534300 Q6ZUG5 572 aa13.61□□□□□ -0.23
AMBRA1-212ENST00000534300 HOOK2Q96ED9 719 aa13.61□□□□□ -0.23
AMBRA1-212ENST00000534300 VCXQ9H320 206 aa13.61□□□□□ -0.23
AMBRA1-212ENST00000534300 DCTPP1Q9H773 170 aa13.61□□□□□ -0.23
AMBRA1-212ENST00000534300 GJA3Q9Y6H8 435 aa13.61□□□□□ -0.23
AMBRA1-212ENST00000534300 BICDL2A1A5D9 508 aa13.6□□□□□ -0.23
AMBRA1-212ENST00000534300 ATP5DP30049 168 aa13.6□□□□□ -0.23
AMBRA1-212ENST00000534300 UBXN1Q04323 297 aa13.6□□□□□ -0.23
AMBRA1-212ENST00000534300 WDR78Q5VTH9 848 aa13.6□□□□□ -0.23
AMBRA1-212ENST00000534300 CROCCP2Q86T23 111 aa13.6□□□□□ -0.23
AMBRA1-212ENST00000534300 PPP1R9BQ96SB3 815 aa13.6□□□□□ -0.23
AMBRA1-212ENST00000534300 KCNK9Q9NPC2 374 aa13.6□□□□□ -0.23
AMBRA1-212ENST00000534300 ATP7BP35670 1465 aa13.6□□□□□ -0.23
AMBRA1-212ENST00000534300 CAMSAP1Q5T5Y3 1602 aa13.6□□□□□ -0.23
AMBRA1-212ENST00000534300 TNS3Q68CZ2 1445 aa13.6□□□□□ -0.23
AMBRA1-212ENST00000534300 SPATA31E1Q6ZUB1 1445 aa13.6□□□□□ -0.23
AMBRA1-212ENST00000534300 PHKG2P15735 406 aa13.6□□□□□ -0.23
AMBRA1-212ENST00000534300 USP6P35125 1406 aa13.6□□□□□ -0.23
AMBRA1-212ENST00000534300 ARHGAP6O43182 974 aa13.6□□□□□ -0.23
AMBRA1-212ENST00000534300 IL13P35225 146 aa13.6□□□□□ -0.23
AMBRA1-212ENST00000534300 CALCOCO2Q13137 446 aa13.6□□□□□ -0.23
AMBRA1-212ENST00000534300 CCDC26Q8TAB7 109 aa13.6□□□□□ -0.23
AMBRA1-212ENST00000534300 CCDC97Q96F63 343 aaPredicted RBP13.6□□□□□ -0.23
AMBRA1-212ENST00000534300 PPP1R12CQ9BZL4 782 aa13.6□□□□□ -0.23
AMBRA1-212ENST00000534300 LOC102724428A0A0B4J2F2 783 aa13.6□□□□□ -0.23
AMBRA1-212ENST00000534300 SIK1P57059 783 aa13.6□□□□□ -0.23
AMBRA1-212ENST00000534300 CCDC38Q502W7 563 aa13.6□□□□□ -0.23
AMBRA1-212ENST00000534300 NIM1KQ8IY84 436 aa13.6□□□□□ -0.23
AMBRA1-212ENST00000534300 CUL5Q93034 780 aa13.6□□□□□ -0.23
AMBRA1-212ENST00000534300 JAKMIP2Q96AA8 810 aa13.6□□□□□ -0.23
AMBRA1-212ENST00000534300 MEIS3Q99687 375 aa13.59□□□□□ -0.23
AMBRA1-212ENST00000534300 GOLGA6BA6NDN3 693 aa13.59□□□□□ -0.23
AMBRA1-212ENST00000534300 GRM8O00222 908 aa13.59□□□□□ -0.23
AMBRA1-212ENST00000534300 GBP1P32455 592 aa13.59□□□□□ -0.23
AMBRA1-212ENST00000534300 TRIM14Q14142 442 aa13.59□□□□□ -0.23
AMBRA1-212ENST00000534300 LRRC45Q96CN5 670 aa13.59□□□□□ -0.23
AMBRA1-212ENST00000534300 SEC62Q99442 399 aaKnown RBP13.59□□□□□ -0.23
AMBRA1-212ENST00000534300 FAM184BQ9ULE4 1060 aa13.59□□□□□ -0.23
AMBRA1-212ENST00000534300 RIMS1Q86UR5 1692 aaKnown RBP13.59□□□□□ -0.23
AMBRA1-212ENST00000534300 NEDD9Q14511 834 aa13.59□□□□□ -0.23
AMBRA1-212ENST00000534300 WTAPQ15007 396 aa13.59□□□□□ -0.23
AMBRA1-212ENST00000534300 UTP14CQ5TAP6 766 aaKnown RBP13.59□□□□□ -0.23
AMBRA1-212ENST00000534300 SYCP3Q8IZU3 236 aa13.59□□□□□ -0.23
AMBRA1-212ENST00000534300 PLBD2Q8NHP8 589 aa13.59□□□□□ -0.23
AMBRA1-212ENST00000534300 DHX58Q96C10 678 aa13.59□□□□□ -0.23
AMBRA1-212ENST00000534300 PLCG2P16885 1265 aa13.59□□□□□ -0.23
AMBRA1-212ENST00000534300 BANK1Q8NDB2 785 aa13.59□□□□□ -0.23
AMBRA1-212ENST00000534300 NEK11Q8NG66 645 aa13.59□□□□□ -0.23
AMBRA1-212ENST00000534300 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.59□□□□□ -0.235e-10■□□□□ 9.2
AMBRA1-212ENST00000534300 DDX23Q9BUQ8 820 aaKnown RBP13.59□□□□□ -0.23
AMBRA1-212ENST00000534300 HPDP32754 393 aaPredicted RBP13.58□□□□□ -0.23
AMBRA1-212ENST00000534300 C8orf74Q6P047 294 aa13.58□□□□□ -0.23
AMBRA1-212ENST00000534300 PNMA8AQ86V59 439 aaPredicted RBP13.58□□□□□ -0.23
AMBRA1-212ENST00000534300 RAB11FIP4Q86YS3 637 aa13.58□□□□□ -0.23
AMBRA1-212ENST00000534300 UBLCP1Q8WVY7 318 aaPredicted RBP13.58□□□□□ -0.23
AMBRA1-212ENST00000534300 FERMT2Q96AC1 680 aa13.58□□□□□ -0.23
AMBRA1-212ENST00000534300 MPHOSPH6Q99547 160 aaKnown RBP13.58□□□□□ -0.23
AMBRA1-212ENST00000534300 VCX3BQ9H321 246 aa13.58□□□□□ -0.23
AMBRA1-212ENST00000534300 TBCAO75347 108 aaKnown RBP13.58□□□□□ -0.24
AMBRA1-212ENST00000534300 IL15P40933 162 aaPredicted RBP13.58□□□□□ -0.24
AMBRA1-212ENST00000534300 ATP8B2P98198 1209 aa13.58□□□□□ -0.24
AMBRA1-212ENST00000534300 BRD3Q15059 726 aa13.58□□□□□ -0.24
AMBRA1-212ENST00000534300 MCMDC2Q4G0Z9 681 aa13.58□□□□□ -0.24
AMBRA1-212ENST00000534300 DPP8Q6V1X1 898 aaPredicted RBP13.58□□□□□ -0.24
AMBRA1-212ENST00000534300 GPR161Q8N6U8 529 aaKnown RBP13.58□□□□□ -0.24
AMBRA1-212ENST00000534300 KIAA1524Q8TCG1 905 aa13.58□□□□□ -0.24
AMBRA1-212ENST00000534300 LRRC2Q9BYS8 371 aa13.58□□□□□ -0.24
AMBRA1-212ENST00000534300 KRT23Q9C075 422 aa13.58□□□□□ -0.24
AMBRA1-212ENST00000534300 SMIM23A6NLE4 172 aa13.58□□□□□ -0.24
AMBRA1-212ENST00000534300 ASIC1P78348 528 aa13.58□□□□□ -0.24
AMBRA1-212ENST00000534300 CCDC174Q6PII3 467 aa13.58□□□□□ -0.24
AMBRA1-212ENST00000534300 ARHGAP27Q6ZUM4 889 aa13.58□□□□□ -0.24
AMBRA1-212ENST00000534300 C17orf53Q8N3J3 647 aaPredicted RBP13.58□□□□□ -0.24
AMBRA1-212ENST00000534300 CIB2O75838 187 aa13.58□□□□□ -0.24
AMBRA1-212ENST00000534300 ATP2B3Q16720 1220 aa13.58□□□□□ -0.24
AMBRA1-212ENST00000534300 USP37Q86T82 979 aa13.58□□□□□ -0.24
AMBRA1-212ENST00000534300 MTUS1Q9ULD2 1270 aa13.58□□□□□ -0.24
AMBRA1-212ENST00000534300 IFT20Q8IY31 132 aa13.57□□□□□ -0.24
AMBRA1-212ENST00000534300 CNNM2Q9H8M5 875 aa13.57□□□□□ -0.24
AMBRA1-212ENST00000534300 EHMT1Q9H9B1 1298 aa13.57□□□□□ -0.24
AMBRA1-212ENST00000534300 SETD1BQ9UPS6 1966 aaKnown RBP13.57□□□□□ -0.24
AMBRA1-212ENST00000534300 SH3BGRP55822 239 aaPredicted RBP13.57□□□□□ -0.24
AMBRA1-212ENST00000534300 STX17P56962 302 aa13.57□□□□□ -0.24
AMBRA1-212ENST00000534300 RTN1Q16799 776 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms