RNA–Protein interactions for RNA: ENST00000534143.5

CMTM1-220, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 781 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-220ENST00000534143 RWDD1Q9H446 243 aaPredicted RBP7.64□□□□□ -1.19
CMTM1-220ENST00000534143 NIP7Q9Y221 180 aaKnown RBP eCLIP7.64□□□□□ -1.19
CMTM1-220ENST00000534143 PNMA6EA0A0J9YXQ4 647 aa7.63□□□□□ -1.19
CMTM1-220ENST00000534143 NTSR2O95665 410 aa7.63□□□□□ -1.19
CMTM1-220ENST00000534143 TM4SF1P30408 202 aa7.63□□□□□ -1.19
CMTM1-220ENST00000534143 SCTRP47872 440 aa7.63□□□□□ -1.19
CMTM1-220ENST00000534143 FOXO4P98177 505 aa7.63□□□□□ -1.19
CMTM1-220ENST00000534143 PTSQ03393 145 aa7.63□□□□□ -1.19
CMTM1-220ENST00000534143 RABL6Q3YEC7 729 aaPredicted RBP7.63□□□□□ -1.19
CMTM1-220ENST00000534143 FOXD4L5Q5VV16 416 aaPredicted RBP7.63□□□□□ -1.19
CMTM1-220ENST00000534143 CENPQQ7L2Z9 268 aaPredicted RBP7.63□□□□□ -1.19
CMTM1-220ENST00000534143 PPP1R42Q7Z4L9 355 aa7.63□□□□□ -1.19
CMTM1-220ENST00000534143 SMC5Q8IY18 1101 aa7.63□□□□□ -1.19
CMTM1-220ENST00000534143 SYNE4Q8N205 404 aa7.63□□□□□ -1.19
CMTM1-220ENST00000534143 PHTF2Q8N3S3 785 aa7.63□□□□□ -1.19
CMTM1-220ENST00000534143 SSH3Q8TE77 659 aa7.63□□□□□ -1.19
CMTM1-220ENST00000534143 CCDC85AQ96PX6 553 aaPredicted RBP7.63□□□□□ -1.19
CMTM1-220ENST00000534143 PDGFDQ9GZP0 370 aaPredicted RBP7.63□□□□□ -1.19
CMTM1-220ENST00000534143 BICC1Q9H694 974 aaKnown RBP7.63□□□□□ -1.19
CMTM1-220ENST00000534143 STK32BQ9NY57 414 aa7.63□□□□□ -1.19
CMTM1-220ENST00000534143 TFCP2L1Q9NZI6 479 aa7.63□□□□□ -1.19
CMTM1-220ENST00000534143 MYH3P11055 1940 aa7.62□□□□□ -1.19
CMTM1-220ENST00000534143 DDX60Q8IY21 1712 aaKnown RBP7.62□□□□□ -1.19
CMTM1-220ENST00000534143 TRAK2O60296 914 aa7.62□□□□□ -1.19
CMTM1-220ENST00000534143 CSF1RP07333 972 aa7.62□□□□□ -1.19
CMTM1-220ENST00000534143 VSIG8P0DPA2 414 aa7.62□□□□□ -1.19
CMTM1-220ENST00000534143 GMPRP36959 345 aa7.62□□□□□ -1.19
CMTM1-220ENST00000534143 RNF144AP50876 292 aaPredicted RBP7.62□□□□□ -1.19
CMTM1-220ENST00000534143 NFIXQ14938 502 aa7.62□□□□□ -1.19
CMTM1-220ENST00000534143 SLC10A5Q5PT55 438 aa7.62□□□□□ -1.19
CMTM1-220ENST00000534143 CYP2U1Q7Z449 544 aa7.62□□□□□ -1.19
CMTM1-220ENST00000534143 FAM89AQ96GI7 184 aa7.62□□□□□ -1.19
CMTM1-220ENST00000534143 SETDB2Q96T68 719 aa7.62□□□□□ -1.19
CMTM1-220ENST00000534143 UTP14AQ9BVJ6 771 aaKnown RBP7.62□□□□□ -1.19
CMTM1-220ENST00000534143 OSBPL3Q9H4L5 887 aa7.62□□□□□ -1.19
CMTM1-220ENST00000534143 DCTPP1Q9H773 170 aa7.62□□□□□ -1.19
CMTM1-220ENST00000534143 TRMT112Q9UI30 125 aaKnown RBP7.62□□□□□ -1.19
CMTM1-220ENST00000534143 LAMB2P55268 1798 aa7.61□□□□□ -1.19
CMTM1-220ENST00000534143 SH3TC1Q8TE82 1336 aa7.61□□□□□ -1.19
CMTM1-220ENST00000534143 A0A1W2PRU2 124 aa7.61□□□□□ -1.19
CMTM1-220ENST00000534143 SLC35F4A4IF30 521 aa7.61□□□□□ -1.19
CMTM1-220ENST00000534143 IRS4O14654 1257 aaPredicted RBP7.61□□□□□ -1.19
CMTM1-220ENST00000534143 PDE8AO60658 829 aa7.61□□□□□ -1.19
CMTM1-220ENST00000534143 HMMRO75330 724 aa7.61□□□□□ -1.19
CMTM1-220ENST00000534143 RFX5P48382 616 aaPredicted RBP7.61□□□□□ -1.19
CMTM1-220ENST00000534143 BICDL1Q6ZP65 573 aa7.61□□□□□ -1.19
CMTM1-220ENST00000534143 NLGN1Q8N2Q7 840 aa7.61□□□□□ -1.19
CMTM1-220ENST00000534143 SPON1Q9HCB6 807 aa7.61□□□□□ -1.19
CMTM1-220ENST00000534143 PPP1R1BQ9UD71 204 aaPredicted RBP7.61□□□□□ -1.19
CMTM1-220ENST00000534143 NOP58Q9Y2X3 529 aaKnown RBP7.61□□□□□ -1.19
CMTM1-220ENST00000534143 FAM177BA6PVY3 158 aa7.6□□□□□ -1.19
CMTM1-220ENST00000534143 SRGAP3O43295 1099 aa7.6□□□□□ -1.19
CMTM1-220ENST00000534143 ZBTB7AO95365 584 aa7.6□□□□□ -1.19
CMTM1-220ENST00000534143 GPC1P35052 558 aa7.6□□□□□ -1.19
CMTM1-220ENST00000534143 SOX11P35716 441 aa7.6□□□□□ -1.19
CMTM1-220ENST00000534143 INSM1Q01101 510 aaPredicted RBP7.6□□□□□ -1.19
CMTM1-220ENST00000534143 TSGA10IPQ3SY00 556 aa7.6□□□□□ -1.19
CMTM1-220ENST00000534143 SLFNL1Q499Z3 407 aa7.6□□□□□ -1.19
CMTM1-220ENST00000534143 LMBR1LQ6UX01 489 aa7.6□□□□□ -1.19
CMTM1-220ENST00000534143 TTLL11Q8NHH1 800 aa7.6□□□□□ -1.19
CMTM1-220ENST00000534143 GCC1Q96CN9 775 aa7.6□□□□□ -1.19
CMTM1-220ENST00000534143 NYXQ9GZU5 481 aa7.6□□□□□ -1.19
CMTM1-220ENST00000534143 NRXN2Q9P2S2 1712 aa7.6□□□□□ -1.19
CMTM1-220ENST00000534143 CHD4Q14839 1912 aa7.6□□□□□ -1.19
CMTM1-220ENST00000534143 CARMIL3Q8ND23 1372 aa7.59□□□□□ -1.19
CMTM1-220ENST00000534143 POLRMTO00411 1230 aaKnown RBP7.59□□□□□ -1.19
CMTM1-220ENST00000534143 SERPINB2P05120 415 aa7.59□□□□□ -1.19
CMTM1-220ENST00000534143 HCLS1P14317 486 aaPredicted RBP7.59□□□□□ -1.19
CMTM1-220ENST00000534143 CTSWP56202 376 aa7.59□□□□□ -1.19
CMTM1-220ENST00000534143 DDR1Q08345 913 aa7.59□□□□□ -1.19
CMTM1-220ENST00000534143 SEMA3FQ13275 785 aa7.59□□□□□ -1.19
CMTM1-220ENST00000534143 TPTE2Q6XPS3 522 aa7.59□□□□□ -1.19
CMTM1-220ENST00000534143 LYSMD3Q7Z3D4 306 aa7.59□□□□□ -1.19
CMTM1-220ENST00000534143 NBPF5PQ86XG9 351 aaPredicted RBP7.59□□□□□ -1.19
CMTM1-220ENST00000534143 RNF135Q8IUD6 432 aa7.59□□□□□ -1.19
CMTM1-220ENST00000534143 CCDC155Q8N6L0 562 aa7.59□□□□□ -1.19
CMTM1-220ENST00000534143 POM121Q96HA1 1249 aa7.59□□□□□ -1.19
CMTM1-220ENST00000534143 COPRSQ9NQ92 184 aa7.59□□□□□ -1.19
CMTM1-220ENST00000534143 MEN1O00255 615 aa7.58□□□□□ -1.2
CMTM1-220ENST00000534143 MYCP01106 439 aaPredicted RBP7.58□□□□□ -1.2
CMTM1-220ENST00000534143 HSP90B1P14625 803 aaKnown RBP7.58□□□□□ -1.2
CMTM1-220ENST00000534143 NUCB1Q02818 461 aa7.58□□□□□ -1.2
CMTM1-220ENST00000534143 PTPN12Q05209 780 aaKnown RBP7.58□□□□□ -1.2
CMTM1-220ENST00000534143 SF3B3Q15393 1217 aaKnown RBP7.58□□□□□ -1.2
CMTM1-220ENST00000534143 PRR5LQ6MZQ0 368 aa7.58□□□□□ -1.2
CMTM1-220ENST00000534143 DOLKQ9UPQ8 538 aa7.58□□□□□ -1.2
CMTM1-220ENST00000534143 PA2G4Q9UQ80 394 aaKnown RBP7.58□□□□□ -1.2
CMTM1-220ENST00000534143 RIC1Q4ADV7 1423 aa7.58□□□□□ -1.2
CMTM1-220ENST00000534143 RTL9Q8NET4 1388 aa7.58□□□□□ -1.2
CMTM1-220ENST00000534143 ABCC12Q96J65 1359 aa7.58□□□□□ -1.2
CMTM1-220ENST00000534143 RAD21O60216 631 aa7.57□□□□□ -1.2
CMTM1-220ENST00000534143 RAB11FIP3O75154 756 aa7.57□□□□□ -1.2
CMTM1-220ENST00000534143 SURF6O75683 361 aaKnown RBP7.57□□□□□ -1.2
CMTM1-220ENST00000534143 GNRH1P01148 92 aa7.57□□□□□ -1.2
CMTM1-220ENST00000534143 USP4Q13107 963 aa7.57□□□□□ -1.2
CMTM1-220ENST00000534143 CLN3Q13286 438 aa7.57□□□□□ -1.2
CMTM1-220ENST00000534143 ANKRD45Q5TZF3 282 aa7.57□□□□□ -1.2
CMTM1-220ENST00000534143 KLHDC4Q8TBB5 520 aa7.57□□□□□ -1.2
CMTM1-220ENST00000534143 NANOS1Q8WY41 292 aaKnown RBP7.57□□□□□ -1.2
CMTM1-220ENST00000534143 NLRP3Q96P20 1036 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms