RNA–Protein interactions for RNA: ENST00000534042.5

CAPRIN1-216, Transcript of cell cycle associated protein 1, humanhuman

TSL 5

Gene CAPRIN1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-216ENST00000534042 ATRNL1Q5VV63 1379 aa20.87■□□□□ 0.93
CAPRIN1-216ENST00000534042 PHF20L1A8MW92 1017 aa20.87■□□□□ 0.93
CAPRIN1-216ENST00000534042 FMNL1O95466 1100 aaPredicted RBP20.87■□□□□ 0.93
CAPRIN1-216ENST00000534042 CTGFP29279 349 aa20.87■□□□□ 0.93
CAPRIN1-216ENST00000534042 BTDP43251 543 aa20.87■□□□□ 0.93
CAPRIN1-216ENST00000534042 MTX1Q13505 466 aa20.87■□□□□ 0.93
CAPRIN1-216ENST00000534042 ERICH6Q7L0X2 663 aa20.87■□□□□ 0.93
CAPRIN1-216ENST00000534042 TRIM47Q96LD4 638 aa20.87■□□□□ 0.93
CAPRIN1-216ENST00000534042 ZHX2Q9Y6X8 837 aa20.87■□□□□ 0.93
CAPRIN1-216ENST00000534042 MKI67P46013 3256 aaKnown RBP20.86■□□□□ 0.93
CAPRIN1-216ENST00000534042 GPAT2Q6NUI2 795 aa20.86■□□□□ 0.93
CAPRIN1-216ENST00000534042 SH3BP5LQ7L8J4 393 aa20.86■□□□□ 0.93
CAPRIN1-216ENST00000534042 FASTKD5Q7L8L6 764 aaKnown RBP20.86■□□□□ 0.93
CAPRIN1-216ENST00000534042 NEUROD6Q96NK8 337 aa20.86■□□□□ 0.93
CAPRIN1-216ENST00000534042 RFX7Q2KHR2 1363 aa20.85■□□□□ 0.93
CAPRIN1-216ENST00000534042 MROH7-TTC4A0A0A0MT08 1334 aa20.85■□□□□ 0.93
CAPRIN1-216ENST00000534042 DDTLA6NHG4 134 aaPredicted RBP20.85■□□□□ 0.93
CAPRIN1-216ENST00000534042 CCER2I3L3R5 266 aa20.85■□□□□ 0.93
CAPRIN1-216ENST00000534042 IPO8O15397 1037 aaKnown RBP20.85■□□□□ 0.93
CAPRIN1-216ENST00000534042 PTPRAP18433 802 aa20.85■□□□□ 0.93
CAPRIN1-216ENST00000534042 OSBPP22059 807 aa20.85■□□□□ 0.93
CAPRIN1-216ENST00000534042 MAP3K10Q02779 954 aa20.85■□□□□ 0.93
CAPRIN1-216ENST00000534042 PICALMQ13492 652 aa20.85■□□□□ 0.93
CAPRIN1-216ENST00000534042 HABP4Q5JVS0 413 aaKnown RBP20.85■□□□□ 0.93
CAPRIN1-216ENST00000534042 RAET1EQ8TD07 263 aa20.85■□□□□ 0.93
CAPRIN1-216ENST00000534042 DDX4Q9NQI0 724 aaKnown RBP20.85■□□□□ 0.93
CAPRIN1-216ENST00000534042 CEP290O15078 2479 aa20.84■□□□□ 0.93
CAPRIN1-216ENST00000534042 A0A0G2JLL6 359 aaPredicted RBP20.84■□□□□ 0.93
CAPRIN1-216ENST00000534042 CYP2C8P10632 490 aa20.84■□□□□ 0.93
CAPRIN1-216ENST00000534042 BCRP11274 1271 aa20.84■□□□□ 0.93
CAPRIN1-216ENST00000534042 MECOMQ03112 1051 aa20.84■□□□□ 0.93
CAPRIN1-216ENST00000534042 GORABQ5T7V8 394 aa20.84■□□□□ 0.93
CAPRIN1-216ENST00000534042 PRRT2Q7Z6L0 340 aaPredicted RBP20.84■□□□□ 0.93
CAPRIN1-216ENST00000534042 MYPNQ86TC9 1320 aa20.83■□□□□ 0.93
CAPRIN1-216ENST00000534042 GPR75-ASB3A0A0A6YYF3 556 aa20.83■□□□□ 0.93
CAPRIN1-216ENST00000534042 CTNND1O60716 968 aaKnown RBP20.83■□□□□ 0.93
CAPRIN1-216ENST00000534042 LDHCP07864 332 aa20.83■□□□□ 0.93
CAPRIN1-216ENST00000534042 GRK4P32298 578 aa20.83■□□□□ 0.93
CAPRIN1-216ENST00000534042 FCGRTP55899 365 aa20.83■□□□□ 0.93
CAPRIN1-216ENST00000534042 GADL1Q6ZQY3 521 aa20.83■□□□□ 0.93
CAPRIN1-216ENST00000534042 AFG3L2Q9Y4W6 797 aa20.83■□□□□ 0.93
CAPRIN1-216ENST00000534042 MGAMO43451 1857 aa20.83■□□□□ 0.92
CAPRIN1-216ENST00000534042 PTPRFP10586 1907 aa20.82■□□□□ 0.92
CAPRIN1-216ENST00000534042 DOCK1Q14185 1865 aa20.82■□□□□ 0.92
CAPRIN1-216ENST00000534042 GNAI2P04899 355 aa20.82■□□□□ 0.92
CAPRIN1-216ENST00000534042 MTFR1Q15390 333 aa20.82■□□□□ 0.92
CAPRIN1-216ENST00000534042 HMG20BQ9P0W2 317 aa20.82■□□□□ 0.92
CAPRIN1-216ENST00000534042 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.82■□□□□ 0.92
CAPRIN1-216ENST00000534042 SLURP2P0DP57 97 aa20.81■□□□□ 0.92
CAPRIN1-216ENST00000534042 TRIM27P14373 513 aa20.81■□□□□ 0.92
CAPRIN1-216ENST00000534042 RHBDL3P58872 404 aa20.81■□□□□ 0.92
CAPRIN1-216ENST00000534042 GSTO1P78417 241 aa20.81■□□□□ 0.92
CAPRIN1-216ENST00000534042 G3BP1Q13283 466 aaKnown RBP eCLIP20.81■□□□□ 0.921e-7■■□□□ 11.7
CAPRIN1-216ENST00000534042 ATF7IPQ6VMQ6 1270 aa20.81■□□□□ 0.92
CAPRIN1-216ENST00000534042 SPATA5Q8NB90 893 aa20.81■□□□□ 0.92
CAPRIN1-216ENST00000534042 FRAT1Q92837 279 aaPredicted RBP20.81■□□□□ 0.92
CAPRIN1-216ENST00000534042 BIN2Q9UBW5 565 aaPredicted RBP20.81■□□□□ 0.92
CAPRIN1-216ENST00000534042 SLC45A1Q9Y2W3 748 aa20.81■□□□□ 0.92
CAPRIN1-216ENST00000534042 TBC1D12O60347 775 aa20.8■□□□□ 0.92
CAPRIN1-216ENST00000534042 NPM3O75607 178 aaKnown RBP20.8■□□□□ 0.92
CAPRIN1-216ENST00000534042 PI16Q6UXB8 463 aa20.8■□□□□ 0.92
CAPRIN1-216ENST00000534042 TBC1D9Q6ZT07 1266 aa20.8■□□□□ 0.92
CAPRIN1-216ENST00000534042 NKX2-3Q8TAU0 364 aa20.8■□□□□ 0.92
CAPRIN1-216ENST00000534042 ZNF384Q8TF68 577 aa20.8■□□□□ 0.92
CAPRIN1-216ENST00000534042 RAI14Q9P0K7 980 aa20.8■□□□□ 0.92
CAPRIN1-216ENST00000534042 PHIPQ8WWQ0 1821 aa20.8■□□□□ 0.92
CAPRIN1-216ENST00000534042 TRIM75PA6NK02 468 aa20.79■□□□□ 0.92
CAPRIN1-216ENST00000534042 MAP4K4O95819 1239 aaPredicted RBP20.79■□□□□ 0.92
CAPRIN1-216ENST00000534042 UBXN2AP68543 259 aa20.79■□□□□ 0.92
CAPRIN1-216ENST00000534042 PRKCZQ05513 592 aa20.79■□□□□ 0.92
CAPRIN1-216ENST00000534042 CLUAP1Q96AJ1 413 aa20.79■□□□□ 0.92
CAPRIN1-216ENST00000534042 NSUN4Q96CB9 384 aaKnown RBP20.79■□□□□ 0.92
CAPRIN1-216ENST00000534042 TNNQ9UQP3 1299 aa20.79■□□□□ 0.92
CAPRIN1-216ENST00000534042 DOCK3Q8IZD9 2030 aa20.78■□□□□ 0.92
CAPRIN1-216ENST00000534042 PNMA6EA0A0J9YXQ4 647 aa20.78■□□□□ 0.92
CAPRIN1-216ENST00000534042 BCAR3O75815 825 aa20.78■□□□□ 0.92
CAPRIN1-216ENST00000534042 ARID4AP29374 1257 aaPredicted RBP20.78■□□□□ 0.92
CAPRIN1-216ENST00000534042 SMCR8Q8TEV9 937 aaPredicted RBP20.78■□□□□ 0.92
CAPRIN1-216ENST00000534042 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.78■□□□□ 0.92
CAPRIN1-216ENST00000534042 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.78■□□□□ 0.92
CAPRIN1-216ENST00000534042 BRCA2P51587 3418 aa20.78■□□□□ 0.92
CAPRIN1-216ENST00000534042 GJB1P08034 283 aa20.77■□□□□ 0.92
CAPRIN1-216ENST00000534042 UQCRFS1P1P0C7P4 283 aa20.77■□□□□ 0.92
CAPRIN1-216ENST00000534042 CCL5P13501 91 aa20.77■□□□□ 0.92
CAPRIN1-216ENST00000534042 CCDC84Q86UT8 332 aaPredicted RBP20.77■□□□□ 0.92
CAPRIN1-216ENST00000534042 SLAIN1Q8ND83 568 aa20.77■□□□□ 0.92
CAPRIN1-216ENST00000534042 SHISA4Q96DD7 197 aa20.77■□□□□ 0.92
CAPRIN1-216ENST00000534042 RNF208Q9H0X6 261 aa20.77■□□□□ 0.92
CAPRIN1-216ENST00000534042 OSBPL5Q9H0X9 879 aaPredicted RBP20.77■□□□□ 0.92
CAPRIN1-216ENST00000534042 LRP2BPQ9P2M1 347 aa20.77■□□□□ 0.92
CAPRIN1-216ENST00000534042 GABRQQ9UN88 632 aa20.77■□□□□ 0.92
CAPRIN1-216ENST00000534042 FAM196BA6NMK8 535 aa20.76■□□□□ 0.91
CAPRIN1-216ENST00000534042 MCAMP43121 646 aa20.76■□□□□ 0.91
CAPRIN1-216ENST00000534042 GJA8P48165 433 aa20.76■□□□□ 0.91
CAPRIN1-216ENST00000534042 AGTPBP1Q9UPW5 1226 aa20.76■□□□□ 0.91
CAPRIN1-216ENST00000534042 TEX11Q8IYF3 940 aa20.75■□□□□ 0.91
CAPRIN1-216ENST00000534042 NOL10Q9BSC4 688 aaKnown RBP20.75■□□□□ 0.91
CAPRIN1-216ENST00000534042 COLQQ9Y215 455 aaPredicted RBP20.75■□□□□ 0.91
CAPRIN1-216ENST00000534042 TRIOBPQ9H2D6 2365 aa20.75■□□□□ 0.91
CAPRIN1-216ENST00000534042 H0YGN5 161 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms