RNA–Protein interactions for RNA: ENST00000533752.1

TSKU-204, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

TSL 4

Gene TSKU, Length 643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-204ENST00000533752 ZIC5Q96T25 663 aa19.23■□□□□ 0.67
TSKU-204ENST00000533752 HAUS7Q99871 368 aa19.23■□□□□ 0.67
TSKU-204ENST00000533752 ANTXR1Q9H6X2 564 aa19.23■□□□□ 0.67
TSKU-204ENST00000533752 ECHDC1Q9NTX5 307 aa19.23■□□□□ 0.67
TSKU-204ENST00000533752 PAG1Q9NWQ8 432 aa19.23■□□□□ 0.67
TSKU-204ENST00000533752 SAGE1Q9NXZ1 904 aa19.23■□□□□ 0.67
TSKU-204ENST00000533752 NDUFB9Q9Y6M9 179 aa19.23■□□□□ 0.67
TSKU-204ENST00000533752 OTOFQ9HC10 1997 aa19.23■□□□□ 0.67
TSKU-204ENST00000533752 WNK4Q96J92 1243 aa19.22■□□□□ 0.67
TSKU-204ENST00000533752 BOLA2Q9H3K6 86 aa19.22■□□□□ 0.67
TSKU-204ENST00000533752 DDX4Q9NQI0 724 aaKnown RBP19.22■□□□□ 0.67
TSKU-204ENST00000533752 VGLL4Q14135 290 aa19.21■□□□□ 0.67
TSKU-204ENST00000533752 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.21■□□□□ 0.67
TSKU-204ENST00000533752 ADGRA1Q86SQ6 560 aa19.21■□□□□ 0.67
TSKU-204ENST00000533752 SH3RF3Q8TEJ3 882 aaPredicted RBP19.21■□□□□ 0.67
TSKU-204ENST00000533752 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.21■□□□□ 0.67
TSKU-204ENST00000533752 MANSC4A6NHS7 340 aaPredicted RBP19.2■□□□□ 0.66
TSKU-204ENST00000533752 MIGA2Q7L4E1 593 aa19.2■□□□□ 0.66
TSKU-204ENST00000533752 ZFPM1Q8IX07 1006 aa19.2■□□□□ 0.66
TSKU-204ENST00000533752 EXOC6Q8TAG9 804 aa19.2■□□□□ 0.66
TSKU-204ENST00000533752 OSBPL5Q9H0X9 879 aaPredicted RBP19.2■□□□□ 0.66
TSKU-204ENST00000533752 RWDD1Q9H446 243 aaPredicted RBP19.2■□□□□ 0.66
TSKU-204ENST00000533752 ELP3Q9H9T3 547 aa19.2■□□□□ 0.66
TSKU-204ENST00000533752 PRDM10Q9NQV6 1147 aa19.2■□□□□ 0.66
TSKU-204ENST00000533752 TTC41PQ6P2S7 1318 aa19.2■□□□□ 0.66
TSKU-204ENST00000533752 MYO5AQ9Y4I1 1855 aaKnown RBP19.2■□□□□ 0.66
TSKU-204ENST00000533752 AK9Q5TCS8 1911 aa19.19■□□□□ 0.66
TSKU-204ENST00000533752 HSPA8P11142 646 aaKnown RBP19.19■□□□□ 0.66
TSKU-204ENST00000533752 PDE6AP16499 860 aa19.19■□□□□ 0.66
TSKU-204ENST00000533752 INHBEP58166 350 aa19.19■□□□□ 0.66
TSKU-204ENST00000533752 MKRN3Q13064 507 aaKnown RBP19.19■□□□□ 0.66
TSKU-204ENST00000533752 SLC9C2Q5TAH2 1124 aa19.19■□□□□ 0.66
TSKU-204ENST00000533752 OPTNQ96CV9 577 aa19.19■□□□□ 0.66
TSKU-204ENST00000533752 DHX36Q9H2U1 1008 aaKnown RBP19.19■□□□□ 0.66
TSKU-204ENST00000533752 ERC2O15083 957 aa19.18■□□□□ 0.66
TSKU-204ENST00000533752 TM4SF4P48230 202 aa19.18■□□□□ 0.66
TSKU-204ENST00000533752 SH3BP5LQ7L8J4 393 aa19.18■□□□□ 0.66
TSKU-204ENST00000533752 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.18■□□□□ 0.66
TSKU-204ENST00000533752 ZNF112Q9UJU3 913 aa19.18■□□□□ 0.66
TSKU-204ENST00000533752 FLT1P17948 1338 aa19.18■□□□□ 0.66
TSKU-204ENST00000533752 LAMB1P07942 1786 aa19.17■□□□□ 0.66
TSKU-204ENST00000533752 DDTLA6NHG4 134 aaPredicted RBP19.17■□□□□ 0.66
TSKU-204ENST00000533752 SPDYE5A6NIY4 337 aa19.17■□□□□ 0.66
TSKU-204ENST00000533752 LBX1P52954 281 aa19.17■□□□□ 0.66
TSKU-204ENST00000533752 MAP3K10Q02779 954 aa19.17■□□□□ 0.66
TSKU-204ENST00000533752 NOL9Q5SY16 702 aaKnown RBP19.17■□□□□ 0.66
TSKU-204ENST00000533752 ZSCAN25Q6NSZ9 544 aa19.17■□□□□ 0.66
TSKU-204ENST00000533752 ERO1BQ86YB8 467 aa19.17■□□□□ 0.66
TSKU-204ENST00000533752 MIGA1Q8NAN2 632 aa19.17■□□□□ 0.66
TSKU-204ENST00000533752 TGFBRAP1Q8WUH2 860 aa19.17■□□□□ 0.66
TSKU-204ENST00000533752 SNCAIPQ9Y6H5 919 aa19.17■□□□□ 0.66
TSKU-204ENST00000533752 TBC1D12O60347 775 aa19.16■□□□□ 0.66
TSKU-204ENST00000533752 ALDH1A1P00352 501 aa19.16■□□□□ 0.66
TSKU-204ENST00000533752 ANKRD45Q5TZF3 282 aa19.16■□□□□ 0.66
TSKU-204ENST00000533752 EDC3Q96F86 508 aaKnown RBP19.16■□□□□ 0.66
TSKU-204ENST00000533752 RNF186Q9NXI6 227 aa19.16■□□□□ 0.66
TSKU-204ENST00000533752 ZNF532Q9HCE3 1301 aa19.16■□□□□ 0.66
TSKU-204ENST00000533752 MAGEB6P1A0A0J9YX57 407 aa19.15■□□□□ 0.66
TSKU-204ENST00000533752 GLRX3O76003 335 aaKnown RBP19.15■□□□□ 0.66
TSKU-204ENST00000533752 MX1P20591 662 aa19.15■□□□□ 0.66
TSKU-204ENST00000533752 INPP5BP32019 993 aa19.15■□□□□ 0.66
TSKU-204ENST00000533752 USP5P45974 858 aa19.15■□□□□ 0.66
TSKU-204ENST00000533752 GTF2A2P52657 109 aa19.15■□□□□ 0.66
TSKU-204ENST00000533752 DYNLL1P63167 89 aaKnown RBP19.15■□□□□ 0.66
TSKU-204ENST00000533752 MAPKAPK5Q8IW41 473 aa19.15■□□□□ 0.66
TSKU-204ENST00000533752 ZKSCAN4Q969J2 545 aaPredicted RBP19.15■□□□□ 0.66
TSKU-204ENST00000533752 OTUD5Q96G74 571 aa19.15■□□□□ 0.66
TSKU-204ENST00000533752 PI4KBQ9UBF8 816 aa19.15■□□□□ 0.66
TSKU-204ENST00000533752 HERC5Q9UII4 1024 aaKnown RBP19.15■□□□□ 0.66
TSKU-204ENST00000533752 FOCADQ5VW36 1801 aa19.15■□□□□ 0.66
TSKU-204ENST00000533752 TCRBV5S4A2TA0A5A2 114 aa19.14■□□□□ 0.65
TSKU-204ENST00000533752 ADD2P35612 726 aa19.14■□□□□ 0.65
TSKU-204ENST00000533752 GJA5P36382 358 aa19.14■□□□□ 0.65
TSKU-204ENST00000533752 PPIL2Q13356 520 aa19.14■□□□□ 0.65
TSKU-204ENST00000533752 UBE3CQ15386 1083 aa19.14■□□□□ 0.65
TSKU-204ENST00000533752 LRRFIP1Q32MZ4 808 aaKnown RBP19.14■□□□□ 0.65
TSKU-204ENST00000533752 OTUD7BQ6GQQ9 843 aa19.14■□□□□ 0.65
TSKU-204ENST00000533752 SMC5Q8IY18 1101 aa19.14■□□□□ 0.65
TSKU-204ENST00000533752 RIOK1Q9BRS2 568 aaKnown RBP19.14■□□□□ 0.65
TSKU-204ENST00000533752 CRNKL1Q9BZJ0 848 aaKnown RBP19.14■□□□□ 0.65
TSKU-204ENST00000533752 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.14■□□□□ 0.65
TSKU-204ENST00000533752 PICK1Q9NRD5 415 aa19.14■□□□□ 0.65
TSKU-204ENST00000533752 CTNND1O60716 968 aaKnown RBP19.13■□□□□ 0.65
TSKU-204ENST00000533752 TRPA1O75762 1119 aa19.13■□□□□ 0.65
TSKU-204ENST00000533752 HLA-DOAP06340 250 aa19.13■□□□□ 0.65
TSKU-204ENST00000533752 PPATQ06203 517 aa19.13■□□□□ 0.65
TSKU-204ENST00000533752 TSHZ3Q63HK5 1081 aa19.13■□□□□ 0.65
TSKU-204ENST00000533752 SCYL3Q8IZE3 742 aa19.13■□□□□ 0.65
TSKU-204ENST00000533752 KBTBD3Q8NAB2 608 aa19.13■□□□□ 0.65
TSKU-204ENST00000533752 CDK5RAP2Q96SN8 1893 aa19.12■□□□□ 0.65
TSKU-204ENST00000533752 TESPA1A2RU30 521 aaPredicted RBP19.12■□□□□ 0.65
TSKU-204ENST00000533752 PHF20L1A8MW92 1017 aa19.12■□□□□ 0.65
TSKU-204ENST00000533752 SNAPC2Q13487 334 aa19.12■□□□□ 0.65
TSKU-204ENST00000533752 IFNL1Q8IU54 200 aa19.12■□□□□ 0.65
TSKU-204ENST00000533752 CNKSR2Q8WXI2 1034 aa19.12■□□□□ 0.65
TSKU-204ENST00000533752 CFHR5Q9BXR6 569 aa19.12■□□□□ 0.65
TSKU-204ENST00000533752 TRIM34Q9BYJ4 488 aa19.12■□□□□ 0.65
TSKU-204ENST00000533752 TSKSQ9UJT2 592 aa19.12■□□□□ 0.65
TSKU-204ENST00000533752 SALL3Q9BXA9 1300 aa19.11■□□□□ 0.65
TSKU-204ENST00000533752 ZFYP08048 801 aaPredicted RBP19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms