RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 WDHD1O75717 1129 aaPredicted RBP12.79□□□□□ -0.36
CAPN1-225ENST00000533704 TAF1CQ15572 869 aaPredicted RBP12.79□□□□□ -0.36
CAPN1-225ENST00000533704 AACSQ86V21 672 aa12.79□□□□□ -0.36
CAPN1-225ENST00000533704 ERC1Q8IUD2 1116 aa12.79□□□□□ -0.36
CAPN1-225ENST00000533704 EAF2Q96CJ1 260 aaPredicted RBP12.79□□□□□ -0.36
CAPN1-225ENST00000533704 FAM163AQ96GL9 167 aaPredicted RBP12.79□□□□□ -0.36
CAPN1-225ENST00000533704 CFHR5Q9BXR6 569 aa12.79□□□□□ -0.36
CAPN1-225ENST00000533704 IDI2Q9BXS1 227 aa12.79□□□□□ -0.36
CAPN1-225ENST00000533704 IL1RAPL2Q9NP60 686 aa12.79□□□□□ -0.36
CAPN1-225ENST00000533704 DDX4Q9NQI0 724 aaKnown RBP12.79□□□□□ -0.36
CAPN1-225ENST00000533704 RFX7Q2KHR2 1363 aa12.79□□□□□ -0.36
CAPN1-225ENST00000533704 DDTLA6NHG4 134 aaPredicted RBP12.78□□□□□ -0.36
CAPN1-225ENST00000533704 IRF6O14896 467 aa12.78□□□□□ -0.36
CAPN1-225ENST00000533704 SLURP2P0DP57 97 aa12.78□□□□□ -0.36
CAPN1-225ENST00000533704 CETPP11597 493 aa12.78□□□□□ -0.36
CAPN1-225ENST00000533704 ZAP70P43403 619 aa12.78□□□□□ -0.36
CAPN1-225ENST00000533704 PPIL2Q13356 520 aa12.78□□□□□ -0.36
CAPN1-225ENST00000533704 SNAPC2Q13487 334 aa12.78□□□□□ -0.36
CAPN1-225ENST00000533704 NOM1Q5C9Z4 860 aaKnown RBP12.78□□□□□ -0.36
CAPN1-225ENST00000533704 NAA16Q6N069 864 aaPredicted RBP12.78□□□□□ -0.36
CAPN1-225ENST00000533704 SH3BP5LQ7L8J4 393 aa12.78□□□□□ -0.36
CAPN1-225ENST00000533704 TEX11Q8IYF3 940 aa12.78□□□□□ -0.36
CAPN1-225ENST00000533704 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.78□□□□□ -0.36
CAPN1-225ENST00000533704 FOCADQ5VW36 1801 aa12.78□□□□□ -0.36
CAPN1-225ENST00000533704 MYH1P12882 1939 aa12.78□□□□□ -0.36
CAPN1-225ENST00000533704 HMMRO75330 724 aa12.77□□□□□ -0.37
CAPN1-225ENST00000533704 CYP2E1P05181 493 aaPredicted RBP12.77□□□□□ -0.37
CAPN1-225ENST00000533704 SOX10P56693 466 aa12.77□□□□□ -0.37
CAPN1-225ENST00000533704 RHBDL3P58872 404 aa12.77□□□□□ -0.37
CAPN1-225ENST00000533704 PPATQ06203 517 aa12.77□□□□□ -0.37
CAPN1-225ENST00000533704 HSP90AB4PQ58FF6 505 aa12.77□□□□□ -0.37
CAPN1-225ENST00000533704 FAM43AQ8N2R8 423 aa12.77□□□□□ -0.37
CAPN1-225ENST00000533704 CD99L2Q8TCZ2 262 aa12.77□□□□□ -0.37
CAPN1-225ENST00000533704 SH3RF3Q8TEJ3 882 aaPredicted RBP12.77□□□□□ -0.37
CAPN1-225ENST00000533704 ZFYVE28Q9HCC9 887 aa12.77□□□□□ -0.37
CAPN1-225ENST00000533704 PIH1D3Q9NQM4 214 aaKnown RBP12.77□□□□□ -0.37
CAPN1-225ENST00000533704 PICK1Q9NRD5 415 aa12.77□□□□□ -0.37
CAPN1-225ENST00000533704 AATFQ9NY61 560 aaKnown RBP eCLIP12.77□□□□□ -0.37
CAPN1-225ENST00000533704 ZNF112Q9UJU3 913 aa12.77□□□□□ -0.37
CAPN1-225ENST00000533704 HPS5Q9UPZ3 1129 aa12.77□□□□□ -0.37
CAPN1-225ENST00000533704 TRIM17Q9Y577 477 aa12.77□□□□□ -0.37
CAPN1-225ENST00000533704 PTPRFP10586 1907 aa12.77□□□□□ -0.37
CAPN1-225ENST00000533704 ZSWIM8A7E2V4 1837 aa12.76□□□□□ -0.37
CAPN1-225ENST00000533704 PHIPQ8WWQ0 1821 aa12.76□□□□□ -0.37
CAPN1-225ENST00000533704 FAM196BA6NMK8 535 aa12.76□□□□□ -0.37
CAPN1-225ENST00000533704 IDH1O75874 414 aaKnown RBP12.76□□□□□ -0.37
CAPN1-225ENST00000533704 PKN2Q16513 984 aaKnown RBP12.76□□□□□ -0.37
CAPN1-225ENST00000533704 C20orf194Q5TEA3 1177 aa12.76□□□□□ -0.37
CAPN1-225ENST00000533704 RPAP2Q8IXW5 612 aaPredicted RBP12.76□□□□□ -0.37
CAPN1-225ENST00000533704 RHPN1Q8TCX5 695 aa12.76□□□□□ -0.37
CAPN1-225ENST00000533704 ERO1AQ96HE7 468 aa12.76□□□□□ -0.37
CAPN1-225ENST00000533704 CHMP4BQ9H444 224 aaKnown RBP12.76□□□□□ -0.37
CAPN1-225ENST00000533704 ZBTB40Q9NUA8 1239 aa12.76□□□□□ -0.37
CAPN1-225ENST00000533704 NDUFB9Q9Y6M9 179 aa12.76□□□□□ -0.37
CAPN1-225ENST00000533704 BTBD19C9JJ37 291 aa12.75□□□□□ -0.37
CAPN1-225ENST00000533704 ECM2O94769 699 aaPredicted RBP12.75□□□□□ -0.37
CAPN1-225ENST00000533704 BAG3O95817 575 aa12.75□□□□□ -0.37
CAPN1-225ENST00000533704 SP3Q02447 781 aa12.75□□□□□ -0.37
CAPN1-225ENST00000533704 NOL9Q5SY16 702 aaKnown RBP12.75□□□□□ -0.37
CAPN1-225ENST00000533704 ATRNL1Q5VV63 1379 aa12.75□□□□□ -0.37
CAPN1-225ENST00000533704 FBXO46Q6PJ61 603 aaPredicted RBP12.75□□□□□ -0.37
CAPN1-225ENST00000533704 SCYL3Q8IZE3 742 aa12.75□□□□□ -0.37
CAPN1-225ENST00000533704 ZNF512BQ96KM6 892 aaPredicted RBP12.75□□□□□ -0.37
CAPN1-225ENST00000533704 OSBPL5Q9H0X9 879 aaPredicted RBP12.75□□□□□ -0.37
CAPN1-225ENST00000533704 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.75□□□□□ -0.37
CAPN1-225ENST00000533704 SIPA1L1O43166 1804 aa12.74□□□□□ -0.37
CAPN1-225ENST00000533704 PHF20L1A8MW92 1017 aa12.74□□□□□ -0.37
CAPN1-225ENST00000533704 IFIT2P09913 472 aaKnown RBP12.74□□□□□ -0.37
CAPN1-225ENST00000533704 PLCG2P16885 1265 aa12.74□□□□□ -0.37
CAPN1-225ENST00000533704 CYP7A1P22680 504 aa12.74□□□□□ -0.37
CAPN1-225ENST00000533704 OTOP1Q7RTM1 612 aa12.74□□□□□ -0.37
CAPN1-225ENST00000533704 ADGRA1Q86SQ6 560 aa12.74□□□□□ -0.37
CAPN1-225ENST00000533704 MAPKAPK5Q8IW41 473 aa12.74□□□□□ -0.37
CAPN1-225ENST00000533704 SIRT2Q8IXJ6 389 aa12.74□□□□□ -0.37
CAPN1-225ENST00000533704 CLASRPQ8N2M8 674 aaKnown RBP12.74□□□□□ -0.37
CAPN1-225ENST00000533704 EFCC1Q9HA90 598 aa12.74□□□□□ -0.37
CAPN1-225ENST00000533704 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.74□□□□□ -0.37
CAPN1-225ENST00000533704 ZHX2Q9Y6X8 837 aa12.74□□□□□ -0.37
CAPN1-225ENST00000533704 MYH7P12883 1935 aa12.73□□□□□ -0.37
CAPN1-225ENST00000533704 MAP4K4O95819 1239 aaPredicted RBP12.73□□□□□ -0.37
CAPN1-225ENST00000533704 DYNLL1P63167 89 aaKnown RBP12.73□□□□□ -0.37
CAPN1-225ENST00000533704 MLLT1Q03111 559 aaPredicted RBP12.73□□□□□ -0.37
CAPN1-225ENST00000533704 GADL1Q6ZQY3 521 aa12.73□□□□□ -0.37
CAPN1-225ENST00000533704 CCDC84Q86UT8 332 aaPredicted RBP12.73□□□□□ -0.37
CAPN1-225ENST00000533704 MAGEB6Q8N7X4 407 aa12.73□□□□□ -0.37
CAPN1-225ENST00000533704 MIGA1Q8NAN2 632 aa12.73□□□□□ -0.37
CAPN1-225ENST00000533704 TGFBRAP1Q8WUH2 860 aa12.73□□□□□ -0.37
CAPN1-225ENST00000533704 KIF1BPQ96EK5 621 aa12.73□□□□□ -0.37
CAPN1-225ENST00000533704 YTHDC1Q96MU7 727 aaKnown RBP12.73□□□□□ -0.37
CAPN1-225ENST00000533704 ANTXR1Q9H6X2 564 aa12.73□□□□□ -0.37
CAPN1-225ENST00000533704 KCNH4Q9UQ05 1017 aa12.73□□□□□ -0.37
CAPN1-225ENST00000533704 MGAMO43451 1857 aa12.72□□□□□ -0.37
CAPN1-225ENST00000533704 TRIM75PA6NK02 468 aa12.72□□□□□ -0.37
CAPN1-225ENST00000533704 PDHXO00330 501 aa12.72□□□□□ -0.37
CAPN1-225ENST00000533704 CTNND1O60716 968 aaKnown RBP12.72□□□□□ -0.37
CAPN1-225ENST00000533704 NPM3O75607 178 aaKnown RBP12.72□□□□□ -0.37
CAPN1-225ENST00000533704 PTPRAP18433 802 aa12.72□□□□□ -0.37
CAPN1-225ENST00000533704 PDE3AQ14432 1141 aa12.72□□□□□ -0.37
CAPN1-225ENST00000533704 SLC4A8Q2Y0W8 1093 aa12.72□□□□□ -0.37
CAPN1-225ENST00000533704 DNAJC2Q99543 621 aaKnown RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms