RNA–Protein interactions for RNA: ENST00000533683.6

SAMD1-202, Transcript of sterile alpha motif domain containing 1, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene SAMD1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD1-202ENST00000533683 MTA3Q9BTC8 594 aa33.2■■■□□ 2.91
SAMD1-202ENST00000533683 NUP62CLQ9H1M0 184 aa33.2■■■□□ 2.91
SAMD1-202ENST00000533683 JAG2Q9Y219 1238 aa33.2■■■□□ 2.91
SAMD1-202ENST00000533683 XDHP47989 1333 aa33.2■■■□□ 2.9
SAMD1-202ENST00000533683 ST5P78524 1137 aa33.19■■■□□ 2.9
SAMD1-202ENST00000533683 PROM2Q8N271 834 aa33.19■■■□□ 2.9
SAMD1-202ENST00000533683 PHKBQ93100 1093 aa33.19■■■□□ 2.9
SAMD1-202ENST00000533683 WTAPQ15007 396 aa33.19■■■□□ 2.9
SAMD1-202ENST00000533683 RGS22Q8NE09 1264 aa33.19■■■□□ 2.9
SAMD1-202ENST00000533683 AIFM3Q96NN9 605 aa33.18■■■□□ 2.9
SAMD1-202ENST00000533683 RRAGDQ9NQL2 400 aaPredicted RBP33.18■■■□□ 2.9
SAMD1-202ENST00000533683 DDX19AQ9NUU7 478 aaKnown RBP33.18■■■□□ 2.9
SAMD1-202ENST00000533683 CYP2D7A0A087X1C5 515 aa33.17■■■□□ 2.9
SAMD1-202ENST00000533683 CAMK4Q16566 473 aa33.17■■■□□ 2.9
SAMD1-202ENST00000533683 ALG1Q9BT22 464 aa33.17■■■□□ 2.9
SAMD1-202ENST00000533683 AATFQ9NY61 560 aaKnown RBP eCLIP33.17■■■□□ 2.9
SAMD1-202ENST00000533683 NR1I2O75469 434 aa33.17■■■□□ 2.9
SAMD1-202ENST00000533683 TXNRD1Q16881 649 aa33.17■■■□□ 2.9
SAMD1-202ENST00000533683 SYNE3Q6ZMZ3 975 aa33.17■■■□□ 2.9
SAMD1-202ENST00000533683 CCDC88AQ3V6T2 1871 aa33.17■■■□□ 2.9
SAMD1-202ENST00000533683 ERICH2A1L162 156 aa33.16■■■□□ 2.9
SAMD1-202ENST00000533683 RANBP6O60518 1105 aaKnown RBP33.16■■■□□ 2.9
SAMD1-202ENST00000533683 NID2Q14112 1375 aa33.16■■■□□ 2.9
SAMD1-202ENST00000533683 DDR1Q08345 913 aa33.16■■■□□ 2.9
SAMD1-202ENST00000533683 CTR9Q6PD62 1173 aa33.16■■■□□ 2.9
SAMD1-202ENST00000533683 ESR2Q92731 530 aa33.16■■■□□ 2.9
SAMD1-202ENST00000533683 MAST2Q6P0Q8 1798 aa33.15■■■□□ 2.9
SAMD1-202ENST00000533683 POLR3DP05423 398 aaPredicted RBP33.15■■■□□ 2.9
SAMD1-202ENST00000533683 IARSP41252 1262 aaKnown RBP33.15■■■□□ 2.9
SAMD1-202ENST00000533683 MAP3K11Q16584 847 aa33.15■■■□□ 2.9
SAMD1-202ENST00000533683 TMTC2Q8N394 836 aa33.15■■■□□ 2.9
SAMD1-202ENST00000533683 KIF23Q02241 960 aaPredicted RBP33.14■■■□□ 2.9
SAMD1-202ENST00000533683 SPTY2D1Q68D10 685 aaPredicted RBP33.14■■■□□ 2.9
SAMD1-202ENST00000533683 TMED8Q6PL24 325 aaPredicted RBP33.14■■■□□ 2.9
SAMD1-202ENST00000533683 BRAPQ7Z569 592 aa33.14■■■□□ 2.9
SAMD1-202ENST00000533683 TDRD7Q8NHU6 1098 aaKnown RBP33.14■■■□□ 2.9
SAMD1-202ENST00000533683 RTEL1Q9NZ71 1219 aa33.14■■■□□ 2.9
SAMD1-202ENST00000533683 KIF28PB7ZC32 967 aa33.14■■■□□ 2.9
SAMD1-202ENST00000533683 GPSM2P81274 684 aa33.14■■■□□ 2.9
SAMD1-202ENST00000533683 UBAC1Q9BSL1 405 aa33.14■■■□□ 2.9
SAMD1-202ENST00000533683 TNMDQ9H2S6 317 aa33.14■■■□□ 2.9
SAMD1-202ENST00000533683 CLSTN2Q9H4D0 955 aa33.14■■■□□ 2.9
SAMD1-202ENST00000533683 GPR101Q96P66 508 aaPredicted RBP33.13■■■□□ 2.89
SAMD1-202ENST00000533683 CRNKL1Q9BZJ0 848 aaKnown RBP33.13■■■□□ 2.89
SAMD1-202ENST00000533683 USP17L12C9JPN9 530 aa33.13■■■□□ 2.89
SAMD1-202ENST00000533683 USP17L21D6R901 530 aa33.13■■■□□ 2.89
SAMD1-202ENST00000533683 UVSSAQ2YD98 709 aa33.13■■■□□ 2.89
SAMD1-202ENST00000533683 C15orf52Q6ZUT6 534 aaKnown RBP33.13■■■□□ 2.89
SAMD1-202ENST00000533683 RBM17Q96I25 401 aaKnown RBP33.13■■■□□ 2.89
SAMD1-202ENST00000533683 DUOX1Q9NRD9 1551 aa33.12■■■□□ 2.89
SAMD1-202ENST00000533683 POLRMTO00411 1230 aaKnown RBP33.12■■■□□ 2.89
SAMD1-202ENST00000533683 DZIP1Q86YF9 867 aaKnown RBP33.12■■■□□ 2.89
SAMD1-202ENST00000533683 WDR66Q8TBY9 1149 aa33.12■■■□□ 2.89
SAMD1-202ENST00000533683 DCP1AQ9NPI6 582 aaPredicted RBP33.12■■■□□ 2.89
SAMD1-202ENST00000533683 ECM29Q5VYK3 1845 aa33.12■■■□□ 2.89
SAMD1-202ENST00000533683 MYH2Q9UKX2 1941 aa33.12■■■□□ 2.89
SAMD1-202ENST00000533683 FGRP09769 529 aa33.11■■■□□ 2.89
SAMD1-202ENST00000533683 SEC23AQ15436 765 aa33.11■■■□□ 2.89
SAMD1-202ENST00000533683 MYSM1Q5VVJ2 828 aa33.11■■■□□ 2.89
SAMD1-202ENST00000533683 ZNF804AQ7Z570 1209 aa33.11■■■□□ 2.89
SAMD1-202ENST00000533683 CCDC192P0DO97 292 aa33.11■■■□□ 2.89
SAMD1-202ENST00000533683 IFNAR1P17181 557 aa33.11■■■□□ 2.89
SAMD1-202ENST00000533683 KRT40Q6A162 431 aa33.11■■■□□ 2.89
SAMD1-202ENST00000533683 TNKSO95271 1327 aa33.11■■■□□ 2.89
SAMD1-202ENST00000533683 STK36Q9NRP7 1315 aa33.11■■■□□ 2.89
SAMD1-202ENST00000533683 RTN1Q16799 776 aa33.1■■■□□ 2.89
SAMD1-202ENST00000533683 RBM43Q6ZSC3 357 aaKnown RBP33.1■■■□□ 2.89
SAMD1-202ENST00000533683 ATP8A2Q9NTI2 1148 aa33.1■■■□□ 2.89
SAMD1-202ENST00000533683 SSRP1Q08945 709 aaKnown RBP33.1■■■□□ 2.89
SAMD1-202ENST00000533683 CCAR1Q8IX12 1150 aaKnown RBP33.1■■■□□ 2.89
SAMD1-202ENST00000533683 SLC26A6Q9BXS9 759 aa33.1■■■□□ 2.89
SAMD1-202ENST00000533683 CLIC4Q9Y696 253 aa33.1■■■□□ 2.89
SAMD1-202ENST00000533683 UBE2Q2LH0YL09 131 aa33.09■■■□□ 2.89
SAMD1-202ENST00000533683 FMNL1O95466 1100 aaPredicted RBP33.09■■■□□ 2.89
SAMD1-202ENST00000533683 PCP11498 1178 aaKnown RBP33.09■■■□□ 2.89
SAMD1-202ENST00000533683 ME1P48163 572 aa33.09■■■□□ 2.89
SAMD1-202ENST00000533683 CKAP2LQ8IYA6 745 aa33.09■■■□□ 2.89
SAMD1-202ENST00000533683 ZNF654Q8IZM8 581 aa33.09■■■□□ 2.89
SAMD1-202ENST00000533683 ESPNB1AK53 854 aa33.09■■■□□ 2.89
SAMD1-202ENST00000533683 LDHBP07195 334 aaKnown RBP33.09■■■□□ 2.89
SAMD1-202ENST00000533683 RCAN1P53805 252 aa33.09■■■□□ 2.89
SAMD1-202ENST00000533683 LINC00301Q8NCQ3 95 aa33.09■■■□□ 2.89
SAMD1-202ENST00000533683 POLR3EQ9NVU0 708 aa33.09■■■□□ 2.89
SAMD1-202ENST00000533683 PRDM1O75626 825 aa33.08■■■□□ 2.89
SAMD1-202ENST00000533683 HOXA10P31260 410 aaPredicted RBP33.08■■■□□ 2.89
SAMD1-202ENST00000533683 EVX2Q03828 476 aa33.08■■■□□ 2.89
SAMD1-202ENST00000533683 GOLPH3LQ9H4A5 285 aa33.08■■■□□ 2.89
SAMD1-202ENST00000533683 UFL1O94874 794 aa33.07■■■□□ 2.89
SAMD1-202ENST00000533683 ZSCAN10Q96SZ4 725 aaPredicted RBP33.07■■■□□ 2.89
SAMD1-202ENST00000533683 KIAA1551Q9HCM1 1747 aa33.07■■■□□ 2.88
SAMD1-202ENST00000533683 BBOX1O75936 387 aa33.07■■■□□ 2.88
SAMD1-202ENST00000533683 ENAHQ8N8S7 591 aaPredicted RBP33.07■■■□□ 2.88
SAMD1-202ENST00000533683 FANCBQ8NB91 859 aa33.07■■■□□ 2.88
SAMD1-202ENST00000533683 PCDHA7Q9UN72 937 aa33.07■■■□□ 2.88
SAMD1-202ENST00000533683 ATP2B4P23634 1241 aa33.06■■■□□ 2.88
SAMD1-202ENST00000533683 KLRG2A4D1S0 409 aaPredicted RBP33.06■■■□□ 2.88
SAMD1-202ENST00000533683 IGSF3O75054 1194 aa33.06■■■□□ 2.88
SAMD1-202ENST00000533683 NUP133Q8WUM0 1156 aa33.06■■■□□ 2.88
SAMD1-202ENST00000533683 GGA1Q9UJY5 639 aa33.06■■■□□ 2.88
SAMD1-202ENST00000533683 TAOK2Q9UL54 1235 aa33.06■■■□□ 2.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms