RNA–Protein interactions for RNA: ENST00000533682.1

CLP1-205, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLP1, Length 2,435 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-205ENST00000533682 FBXO18Q8NFZ0 1043 aa13.95□□□□□ -0.18
CLP1-205ENST00000533682 RPGRQ92834 1020 aaKnown RBP13.95□□□□□ -0.18
CLP1-205ENST00000533682 KIF28PB7ZC32 967 aa13.94□□□□□ -0.18
CLP1-205ENST00000533682 GPSM2P81274 684 aa13.94□□□□□ -0.18
CLP1-205ENST00000533682 NTRK3Q16288 839 aa13.94□□□□□ -0.18
CLP1-205ENST00000533682 BAZ2BQ9UIF8 2168 aaKnown RBP13.94□□□□□ -0.18
CLP1-205ENST00000533682 KIF3AQ9Y496 699 aa13.94□□□□□ -0.18
CLP1-205ENST00000533682 SLC12A7Q9Y666 1083 aa13.94□□□□□ -0.18
CLP1-205ENST00000533682 USP17L12C9JPN9 530 aa13.94□□□□□ -0.18
CLP1-205ENST00000533682 USP17L21D6R901 530 aa13.94□□□□□ -0.18
CLP1-205ENST00000533682 SLC27A3Q5K4L6 730 aa13.94□□□□□ -0.18
CLP1-205ENST00000533682 SGMS1Q86VZ5 419 aa13.94□□□□□ -0.18
CLP1-205ENST00000533682 CKAP2LQ8IYA6 745 aa13.94□□□□□ -0.18
CLP1-205ENST00000533682 KRT23Q9C075 422 aa13.94□□□□□ -0.18
CLP1-205ENST00000533682 CNNM2Q9H8M5 875 aa13.94□□□□□ -0.18
CLP1-205ENST00000533682 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.93□□□□□ -0.18
CLP1-205ENST00000533682 GOLGA8AA7E2F4 631 aa13.93□□□□□ -0.18
CLP1-205ENST00000533682 CYP2D6P10635 497 aa13.93□□□□□ -0.18
CLP1-205ENST00000533682 ZNF827Q17R98 1081 aa13.93□□□□□ -0.18
CLP1-205ENST00000533682 CTR9Q6PD62 1173 aa13.93□□□□□ -0.18
CLP1-205ENST00000533682 BICD2Q8TD16 824 aa13.93□□□□□ -0.18
CLP1-205ENST00000533682 CFAP45Q9UL16 551 aa13.93□□□□□ -0.18
CLP1-205ENST00000533682 CCDC69A6NI79 296 aa13.93□□□□□ -0.18
CLP1-205ENST00000533682 SEMA3EO15041 775 aa13.93□□□□□ -0.18
CLP1-205ENST00000533682 GUCY1A2P33402 732 aa13.93□□□□□ -0.18
CLP1-205ENST00000533682 LIFRP42702 1097 aa13.93□□□□□ -0.18
CLP1-205ENST00000533682 DIXDC1Q155Q3 683 aa13.93□□□□□ -0.18
CLP1-205ENST00000533682 CRY2Q49AN0 593 aa13.93□□□□□ -0.18
CLP1-205ENST00000533682 PPP1R9BQ96SB3 815 aa13.93□□□□□ -0.18
CLP1-205ENST00000533682 FUCA2Q9BTY2 467 aa13.93□□□□□ -0.18
CLP1-205ENST00000533682 POLRMTO00411 1230 aaKnown RBP13.92□□□□□ -0.18
CLP1-205ENST00000533682 OLFM4Q6UX06 510 aa13.92□□□□□ -0.18
CLP1-205ENST00000533682 ALG1Q9BT22 464 aa13.92□□□□□ -0.18
CLP1-205ENST00000533682 RCOR1Q9UKL0 485 aa13.92□□□□□ -0.18
CLP1-205ENST00000533682 CLIC4Q9Y696 253 aa13.92□□□□□ -0.18
CLP1-205ENST00000533682 XDHP47989 1333 aa13.92□□□□□ -0.18
CLP1-205ENST00000533682 TPM2P07951 284 aa13.92□□□□□ -0.18
CLP1-205ENST00000533682 RBM10P98175 930 aaKnown RBP13.92□□□□□ -0.18
CLP1-205ENST00000533682 CCDC173Q0VFZ6 552 aa13.92□□□□□ -0.18
CLP1-205ENST00000533682 WTAPQ15007 396 aa13.92□□□□□ -0.18
CLP1-205ENST00000533682 NUP133Q8WUM0 1156 aa13.92□□□□□ -0.18
CLP1-205ENST00000533682 ANP32BQ92688 251 aaKnown RBP13.92□□□□□ -0.18
CLP1-205ENST00000533682 TIAM2Q8IVF5 1701 aa13.92□□□□□ -0.18
CLP1-205ENST00000533682 NMT2O60551 498 aa13.91□□□□□ -0.18
CLP1-205ENST00000533682 UFL1O94874 794 aa13.91□□□□□ -0.18
CLP1-205ENST00000533682 ST5P78524 1137 aa13.91□□□□□ -0.18
CLP1-205ENST00000533682 SLC26A6Q9BXS9 759 aa13.91□□□□□ -0.18
CLP1-205ENST00000533682 GOLPH3LQ9H4A5 285 aa13.91□□□□□ -0.18
CLP1-205ENST00000533682 DCP1AQ9NPI6 582 aaPredicted RBP13.91□□□□□ -0.18
CLP1-205ENST00000533682 CCDC88AQ3V6T2 1871 aa13.91□□□□□ -0.18
CLP1-205ENST00000533682 IARSP41252 1262 aaKnown RBP13.91□□□□□ -0.18
CLP1-205ENST00000533682 DZIP1Q86YF9 867 aaKnown RBP13.91□□□□□ -0.18
CLP1-205ENST00000533682 TRIM44Q96DX7 344 aaPredicted RBP13.91□□□□□ -0.18
CLP1-205ENST00000533682 BRIP1Q9BX63 1249 aa13.91□□□□□ -0.18
CLP1-205ENST00000533682 NUP62CLQ9H1M0 184 aa13.91□□□□□ -0.18
CLP1-205ENST00000533682 POLLQ9UGP5 575 aa13.91□□□□□ -0.18
CLP1-205ENST00000533682 ANAPC4Q9UJX5 808 aa13.91□□□□□ -0.18
CLP1-205ENST00000533682 LEMD3Q9Y2U8 911 aa13.91□□□□□ -0.18
CLP1-205ENST00000533682 TNKSO95271 1327 aa13.9□□□□□ -0.18
CLP1-205ENST00000533682 APBA3O96018 575 aa13.9□□□□□ -0.18
CLP1-205ENST00000533682 KIF23Q02241 960 aaPredicted RBP13.9□□□□□ -0.18
CLP1-205ENST00000533682 FAM47AQ5JRC9 791 aa13.9□□□□□ -0.18
CLP1-205ENST00000533682 KRT40Q6A162 431 aa13.9□□□□□ -0.18
CLP1-205ENST00000533682 COL23A1Q86Y22 540 aaPredicted RBP13.9□□□□□ -0.18
CLP1-205ENST00000533682 ENAHQ8N8S7 591 aaPredicted RBP13.9□□□□□ -0.18
CLP1-205ENST00000533682 TDRD7Q8NHU6 1098 aaKnown RBP13.9□□□□□ -0.18
CLP1-205ENST00000533682 CHMP4CQ96CF2 233 aa13.9□□□□□ -0.18
CLP1-205ENST00000533682 UBAC1Q9BSL1 405 aa13.9□□□□□ -0.18
CLP1-205ENST00000533682 RNF41Q9H4P4 317 aaPredicted RBP13.9□□□□□ -0.18
CLP1-205ENST00000533682 PRDM4Q9UKN5 801 aa13.9□□□□□ -0.18
CLP1-205ENST00000533682 USP17L8P0C7I0 530 aa13.9□□□□□ -0.18
CLP1-205ENST00000533682 ME1P48163 572 aa13.9□□□□□ -0.18
CLP1-205ENST00000533682 SEC23AQ15436 765 aa13.9□□□□□ -0.18
CLP1-205ENST00000533682 MPNDQ8N594 471 aa13.9□□□□□ -0.18
CLP1-205ENST00000533682 ECM29Q5VYK3 1845 aa13.89□□□□□ -0.19
CLP1-205ENST00000533682 hCG_1642624A0A1W2PR95 340 aa13.89□□□□□ -0.19
CLP1-205ENST00000533682 ERICH2A1L162 156 aa13.89□□□□□ -0.19
CLP1-205ENST00000533682 ESPNB1AK53 854 aa13.89□□□□□ -0.19
CLP1-205ENST00000533682 LETM1O95202 739 aaPredicted RBP13.89□□□□□ -0.19
CLP1-205ENST00000533682 SART3Q15020 963 aaKnown RBP13.89□□□□□ -0.19
CLP1-205ENST00000533682 CCAR1Q8IX12 1150 aaKnown RBP13.89□□□□□ -0.19
CLP1-205ENST00000533682 ESR2Q92731 530 aa13.89□□□□□ -0.19
CLP1-205ENST00000533682 PDLIM2Q96JY6 352 aa13.89□□□□□ -0.19
CLP1-205ENST00000533682 TNMDQ9H2S6 317 aa13.89□□□□□ -0.19
CLP1-205ENST00000533682 PCDHA7Q9UN72 937 aa13.89□□□□□ -0.19
CLP1-205ENST00000533682 PDS5AQ29RF7 1337 aaKnown RBP13.89□□□□□ -0.19
CLP1-205ENST00000533682 A0A087WWV3 80 aa13.89□□□□□ -0.19
CLP1-205ENST00000533682 LDHBP07195 334 aaKnown RBP13.89□□□□□ -0.19
CLP1-205ENST00000533682 MYSM1Q5VVJ2 828 aa13.89□□□□□ -0.19
CLP1-205ENST00000533682 SYNE3Q6ZMZ3 975 aa13.89□□□□□ -0.19
CLP1-205ENST00000533682 ZNF654Q8IZM8 581 aa13.89□□□□□ -0.19
CLP1-205ENST00000533682 SH3RF3Q8TEJ3 882 aaPredicted RBP13.89□□□□□ -0.19
CLP1-205ENST00000533682 ERCC4Q92889 916 aaPredicted RBP13.89□□□□□ -0.19
CLP1-205ENST00000533682 RBM17Q96I25 401 aaKnown RBP13.89□□□□□ -0.19
CLP1-205ENST00000533682 ZNF396Q96N95 335 aaPredicted RBP13.89□□□□□ -0.19
CLP1-205ENST00000533682 MAP3K11Q16584 847 aa13.88□□□□□ -0.19
CLP1-205ENST00000533682 RTN1Q16799 776 aa13.88□□□□□ -0.19
CLP1-205ENST00000533682 FANCBQ8NB91 859 aa13.88□□□□□ -0.19
CLP1-205ENST00000533682 LINC00301Q8NCQ3 95 aa13.88□□□□□ -0.19
CLP1-205ENST00000533682 CRNKL1Q9BZJ0 848 aaKnown RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms