RNA–Protein interactions for RNA: ENST00000533671.1

NXF1-217, Transcript of nuclear RNA export factor 1, humanhuman

TSL 4

Gene NXF1, Length 589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-217ENST00000533671 DDX4Q9NQI0 724 aaKnown RBP21.2■□□□□ 0.98
NXF1-217ENST00000533671 CSADQ9Y600 493 aa21.2■□□□□ 0.98
NXF1-217ENST00000533671 CDK5RAP2Q96SN8 1893 aa21.2■□□□□ 0.98
NXF1-217ENST00000533671 OTOFQ9HC10 1997 aa21.19■□□□□ 0.98
NXF1-217ENST00000533671 PPP4CP60510 307 aa21.19■□□□□ 0.98
NXF1-217ENST00000533671 MAP3K9P80192 1104 aa21.19■□□□□ 0.98
NXF1-217ENST00000533671 KIF23Q02241 960 aaPredicted RBP21.19■□□□□ 0.98
NXF1-217ENST00000533671 MKRN3Q13064 507 aaKnown RBP21.19■□□□□ 0.98
NXF1-217ENST00000533671 TSHZ3Q63HK5 1081 aa21.19■□□□□ 0.98
NXF1-217ENST00000533671 ADGRA1Q86SQ6 560 aa21.19■□□□□ 0.98
NXF1-217ENST00000533671 CERS3Q8IU89 383 aa21.19■□□□□ 0.98
NXF1-217ENST00000533671 MIGA1Q8NAN2 632 aa21.19■□□□□ 0.98
NXF1-217ENST00000533671 PDE6AP16499 860 aa21.18■□□□□ 0.98
NXF1-217ENST00000533671 DYNLL1P63167 89 aaKnown RBP21.18■□□□□ 0.98
NXF1-217ENST00000533671 B4GALNT3Q6L9W6 998 aa21.18■□□□□ 0.98
NXF1-217ENST00000533671 TGFBRAP1Q8WUH2 860 aa21.18■□□□□ 0.98
NXF1-217ENST00000533671 CLMNQ96JQ2 1002 aa21.18■□□□□ 0.98
NXF1-217ENST00000533671 WRNIP1Q96S55 665 aa21.18■□□□□ 0.98
NXF1-217ENST00000533671 WBP1LQ9NX94 342 aa21.18■□□□□ 0.98
NXF1-217ENST00000533671 TTC41PQ6P2S7 1318 aa21.18■□□□□ 0.98
NXF1-217ENST00000533671 FOCADQ5VW36 1801 aa21.18■□□□□ 0.98
NXF1-217ENST00000533671 NPM3O75607 178 aaKnown RBP21.17■□□□□ 0.98
NXF1-217ENST00000533671 IGHDP01880 384 aa21.17■□□□□ 0.98
NXF1-217ENST00000533671 MX1P20591 662 aa21.17■□□□□ 0.98
NXF1-217ENST00000533671 ZSCAN25Q6NSZ9 544 aa21.17■□□□□ 0.98
NXF1-217ENST00000533671 ZIC5Q96T25 663 aa21.17■□□□□ 0.98
NXF1-217ENST00000533671 ELP3Q9H9T3 547 aa21.17■□□□□ 0.98
NXF1-217ENST00000533671 ZNF532Q9HCE3 1301 aa21.17■□□□□ 0.98
NXF1-217ENST00000533671 RFX7Q2KHR2 1363 aa21.17■□□□□ 0.98
NXF1-217ENST00000533671 MAGEB6P1A0A0J9YX57 407 aa21.16■□□□□ 0.98
NXF1-217ENST00000533671 USP5P45974 858 aa21.16■□□□□ 0.98
NXF1-217ENST00000533671 MAPKAPK5Q8IW41 473 aa21.16■□□□□ 0.98
NXF1-217ENST00000533671 REM2Q8IYK8 340 aaPredicted RBP21.16■□□□□ 0.98
NXF1-217ENST00000533671 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.16■□□□□ 0.98
NXF1-217ENST00000533671 OSBPL5Q9H0X9 879 aaPredicted RBP21.16■□□□□ 0.98
NXF1-217ENST00000533671 MYH1P12882 1939 aa21.16■□□□□ 0.98
NXF1-217ENST00000533671 DDTLA6NHG4 134 aaPredicted RBP21.15■□□□□ 0.98
NXF1-217ENST00000533671 GLRX3O76003 335 aaKnown RBP21.15■□□□□ 0.98
NXF1-217ENST00000533671 SPRYD7Q5W111 196 aa21.15■□□□□ 0.98
NXF1-217ENST00000533671 OTUD7AQ8TE49 926 aaPredicted RBP21.15■□□□□ 0.98
NXF1-217ENST00000533671 WNK4Q96J92 1243 aa21.15■□□□□ 0.98
NXF1-217ENST00000533671 LNPKQ9C0E8 428 aa21.15■□□□□ 0.98
NXF1-217ENST00000533671 VGLL4Q14135 290 aa21.14■□□□□ 0.97
NXF1-217ENST00000533671 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.14■□□□□ 0.97
NXF1-217ENST00000533671 SH3BP5LQ7L8J4 393 aa21.14■□□□□ 0.97
NXF1-217ENST00000533671 SMC5Q8IY18 1101 aa21.14■□□□□ 0.97
NXF1-217ENST00000533671 FLT1P17948 1338 aa21.13■□□□□ 0.97
NXF1-217ENST00000533671 FOXN1O15353 648 aa21.13■□□□□ 0.97
NXF1-217ENST00000533671 ZBTB48P10074 688 aaPredicted RBP21.13■□□□□ 0.97
NXF1-217ENST00000533671 ADD2P35612 726 aa21.13■□□□□ 0.97
NXF1-217ENST00000533671 CTCFP49711 727 aaPredicted RBP21.13■□□□□ 0.97
NXF1-217ENST00000533671 ZKSCAN4Q969J2 545 aaPredicted RBP21.13■□□□□ 0.97
NXF1-217ENST00000533671 OPTNQ96CV9 577 aa21.13■□□□□ 0.97
NXF1-217ENST00000533671 TRIM34Q9BYJ4 488 aa21.13■□□□□ 0.97
NXF1-217ENST00000533671 DHX36Q9H2U1 1008 aaKnown RBP21.13■□□□□ 0.97
NXF1-217ENST00000533671 CA12O43570 354 aa21.12■□□□□ 0.97
NXF1-217ENST00000533671 SREBF2Q12772 1141 aa21.12■□□□□ 0.97
NXF1-217ENST00000533671 LRRFIP1Q32MZ4 808 aaKnown RBP21.12■□□□□ 0.97
NXF1-217ENST00000533671 CRNKL1Q9BZJ0 848 aaKnown RBP21.12■□□□□ 0.97
NXF1-217ENST00000533671 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.12■□□□□ 0.97
NXF1-217ENST00000533671 ATRNL1Q5VV63 1379 aa21.11■□□□□ 0.97
NXF1-217ENST00000533671 TCRBV5S4A2TA0A5A2 114 aa21.11■□□□□ 0.97
NXF1-217ENST00000533671 HLA-DOAP06340 250 aa21.11■□□□□ 0.97
NXF1-217ENST00000533671 INPP5BP32019 993 aa21.11■□□□□ 0.97
NXF1-217ENST00000533671 CHD1LQ86WJ1 897 aa21.11■□□□□ 0.97
NXF1-217ENST00000533671 KBTBD3Q8NAB2 608 aa21.11■□□□□ 0.97
NXF1-217ENST00000533671 OTUD5Q96G74 571 aa21.11■□□□□ 0.97
NXF1-217ENST00000533671 PI4KBQ9UBF8 816 aa21.11■□□□□ 0.97
NXF1-217ENST00000533671 SAP30BPQ9UHR5 308 aaKnown RBP21.11■□□□□ 0.97
NXF1-217ENST00000533671 COL2A1P02458 1487 aaPredicted RBP21.11■□□□□ 0.97
NXF1-217ENST00000533671 MANSC4A6NHS7 340 aaPredicted RBP21.1■□□□□ 0.97
NXF1-217ENST00000533671 UBE3CQ15386 1083 aa21.1■□□□□ 0.97
NXF1-217ENST00000533671 ERO1BQ86YB8 467 aa21.1■□□□□ 0.97
NXF1-217ENST00000533671 CRACR2BQ8N4Y2 399 aaPredicted RBP21.1■□□□□ 0.97
NXF1-217ENST00000533671 PI4K2BQ8TCG2 481 aa21.1■□□□□ 0.97
NXF1-217ENST00000533671 RIOK1Q9BRS2 568 aaKnown RBP21.1■□□□□ 0.97
NXF1-217ENST00000533671 ZNF112Q9UJU3 913 aa21.1■□□□□ 0.97
NXF1-217ENST00000533671 NAV1Q8NEY1 1877 aa21.09■□□□□ 0.97
NXF1-217ENST00000533671 PDE1AP54750 535 aa21.09■□□□□ 0.97
NXF1-217ENST00000533671 NUCB1Q02818 461 aa21.09■□□□□ 0.97
NXF1-217ENST00000533671 FSD1Q9BTV5 496 aa21.09■□□□□ 0.97
NXF1-217ENST00000533671 PALD1Q9ULE6 856 aa21.09■□□□□ 0.97
NXF1-217ENST00000533671 SNCAIPQ9Y6H5 919 aa21.09■□□□□ 0.97
NXF1-217ENST00000533671 TBC1D12O60347 775 aa21.08■□□□□ 0.97
NXF1-217ENST00000533671 TRPA1O75762 1119 aa21.08■□□□□ 0.97
NXF1-217ENST00000533671 MBD4O95243 580 aa21.08■□□□□ 0.97
NXF1-217ENST00000533671 ZFYP08048 801 aaPredicted RBP21.08■□□□□ 0.97
NXF1-217ENST00000533671 INHBEP58166 350 aa21.08■□□□□ 0.97
NXF1-217ENST00000533671 SLC4A8Q2Y0W8 1093 aa21.08■□□□□ 0.97
NXF1-217ENST00000533671 SLFNL1Q499Z3 407 aa21.08■□□□□ 0.97
NXF1-217ENST00000533671 LCORLQ8N3X6 602 aa21.08■□□□□ 0.97
NXF1-217ENST00000533671 CNKSR2Q8WXI2 1034 aa21.08■□□□□ 0.97
NXF1-217ENST00000533671 ARMT1Q9H993 441 aa21.08■□□□□ 0.97
NXF1-217ENST00000533671 PICK1Q9NRD5 415 aa21.08■□□□□ 0.97
NXF1-217ENST00000533671 STAP2Q9UGK3 403 aa21.08■□□□□ 0.97
NXF1-217ENST00000533671 HERC5Q9UII4 1024 aaKnown RBP21.08■□□□□ 0.97
NXF1-217ENST00000533671 TSKSQ9UJT2 592 aa21.08■□□□□ 0.97
NXF1-217ENST00000533671 SALL3Q9BXA9 1300 aa21.07■□□□□ 0.96
NXF1-217ENST00000533671 SPDYE5A6NIY4 337 aa21.07■□□□□ 0.96
NXF1-217ENST00000533671 FAM196BA6NMK8 535 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms