RNA–Protein interactions for RNA: ENST00000533521.5

BEST1-207, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 1,128 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-207ENST00000533521 PKN2Q16513 984 aaKnown RBP27.26■■□□□ 1.95
BEST1-207ENST00000533521 CTU1Q7Z7A3 348 aaKnown RBP27.26■■□□□ 1.95
BEST1-207ENST00000533521 RHPN1Q8TCX5 695 aa27.26■■□□□ 1.95
BEST1-207ENST00000533521 CCDC8Q9H0W5 538 aaPredicted RBP27.26■■□□□ 1.95
BEST1-207ENST00000533521 ZCCHC17Q9NP64 241 aaKnown RBP27.26■■□□□ 1.95
BEST1-207ENST00000533521 PPATQ06203 517 aa27.25■■□□□ 1.95
BEST1-207ENST00000533521 PPIL2Q13356 520 aa27.25■■□□□ 1.95
BEST1-207ENST00000533521 MIGA2Q7L4E1 593 aa27.25■■□□□ 1.95
BEST1-207ENST00000533521 ZFPM1Q8IX07 1006 aa27.25■■□□□ 1.95
BEST1-207ENST00000533521 ZNF296Q8WUU4 475 aaPredicted RBP27.25■■□□□ 1.95
BEST1-207ENST00000533521 ZKSCAN4Q969J2 545 aaPredicted RBP27.25■■□□□ 1.95
BEST1-207ENST00000533521 PLCG2P16885 1265 aa27.24■■□□□ 1.95
BEST1-207ENST00000533521 PPP4CP60510 307 aa27.24■■□□□ 1.95
BEST1-207ENST00000533521 CLASRPQ8N2M8 674 aaKnown RBP27.24■■□□□ 1.95
BEST1-207ENST00000533521 OTUD5Q96G74 571 aa27.24■■□□□ 1.95
BEST1-207ENST00000533521 PTPN18Q99952 460 aa27.24■■□□□ 1.95
BEST1-207ENST00000533521 TBC1D12O60347 775 aa27.23■■□□□ 1.95
BEST1-207ENST00000533521 FKTNO75072 461 aa27.23■■□□□ 1.95
BEST1-207ENST00000533521 CAPN15O75808 1086 aa27.23■■□□□ 1.95
BEST1-207ENST00000533521 BAG3O95817 575 aa27.23■■□□□ 1.95
BEST1-207ENST00000533521 ZAP70P43403 619 aa27.23■■□□□ 1.95
BEST1-207ENST00000533521 NAA16Q6N069 864 aaPredicted RBP27.23■■□□□ 1.95
BEST1-207ENST00000533521 SH3BP5LQ7L8J4 393 aa27.23■■□□□ 1.95
BEST1-207ENST00000533521 AACSQ86V21 672 aa27.23■■□□□ 1.95
BEST1-207ENST00000533521 CNKSR2Q8WXI2 1034 aa27.23■■□□□ 1.95
BEST1-207ENST00000533521 NOL10Q9BSC4 688 aaKnown RBP27.23■■□□□ 1.95
BEST1-207ENST00000533521 DDX4Q9NQI0 724 aaKnown RBP27.23■■□□□ 1.95
BEST1-207ENST00000533521 SNRKQ9NRH2 765 aa27.23■■□□□ 1.95
BEST1-207ENST00000533521 TLR7Q9NYK1 1049 aaKnown RBP27.23■■□□□ 1.95
BEST1-207ENST00000533521 MYO5AQ9Y4I1 1855 aaKnown RBP27.22■■□□□ 1.95
BEST1-207ENST00000533521 CETPP11597 493 aa27.22■■□□□ 1.95
BEST1-207ENST00000533521 CERS3Q8IU89 383 aa27.22■■□□□ 1.95
BEST1-207ENST00000533521 BRI3BPQ8WY22 251 aa27.22■■□□□ 1.95
BEST1-207ENST00000533521 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.22■■□□□ 1.95
BEST1-207ENST00000533521 PHF20L1A8MW92 1017 aa27.21■■□□□ 1.95
BEST1-207ENST00000533521 INPP5BP32019 993 aa27.21■■□□□ 1.95
BEST1-207ENST00000533521 SNAPC2Q13487 334 aa27.21■■□□□ 1.95
BEST1-207ENST00000533521 C20orf194Q5TEA3 1177 aa27.21■■□□□ 1.95
BEST1-207ENST00000533521 ZSCAN29Q8IWY8 852 aaPredicted RBP27.21■■□□□ 1.95
BEST1-207ENST00000533521 CCL15-CCL14A0A0B4J2E2 113 aa27.2■■□□□ 1.94
BEST1-207ENST00000533521 CCL15Q16663 113 aa27.2■■□□□ 1.94
BEST1-207ENST00000533521 PPIL4Q8WUA2 492 aaKnown RBP eCLIP27.2■■□□□ 1.94
BEST1-207ENST00000533521 R3HDMLQ9H3Y0 253 aa27.2■■□□□ 1.94
BEST1-207ENST00000533521 KCNH4Q9UQ05 1017 aa27.2■■□□□ 1.94
BEST1-207ENST00000533521 DDTLA6NHG4 134 aaPredicted RBP27.19■■□□□ 1.94
BEST1-207ENST00000533521 IRF6O14896 467 aa27.19■■□□□ 1.94
BEST1-207ENST00000533521 PICALMQ13492 652 aa27.18■■□□□ 1.94
BEST1-207ENST00000533521 OSBPL5Q9H0X9 879 aaPredicted RBP27.18■■□□□ 1.94
BEST1-207ENST00000533521 IL1RAPL2Q9NP60 686 aa27.18■■□□□ 1.94
BEST1-207ENST00000533521 PIH1D3Q9NQM4 214 aaKnown RBP27.18■■□□□ 1.94
BEST1-207ENST00000533521 FOCADQ5VW36 1801 aa27.18■■□□□ 1.94
BEST1-207ENST00000533521 CTNND1O60716 968 aaKnown RBP27.17■■□□□ 1.94
BEST1-207ENST00000533521 CRHR2Q13324 411 aa27.17■■□□□ 1.94
BEST1-207ENST00000533521 TEX11Q8IYF3 940 aa27.17■■□□□ 1.94
BEST1-207ENST00000533521 DHX36Q9H2U1 1008 aaKnown RBP27.17■■□□□ 1.94
BEST1-207ENST00000533521 CXCL11O14625 94 aa27.16■■□□□ 1.94
BEST1-207ENST00000533521 TTF1Q15361 905 aaPredicted RBP27.16■■□□□ 1.94
BEST1-207ENST00000533521 SCYL3Q8IZE3 742 aa27.16■■□□□ 1.94
BEST1-207ENST00000533521 CDK5RAP2Q96SN8 1893 aa27.16■■□□□ 1.94
BEST1-207ENST00000533521 IFIT2P09913 472 aaKnown RBP27.15■■□□□ 1.94
BEST1-207ENST00000533521 MAP3K12Q12852 859 aa27.15■■□□□ 1.94
BEST1-207ENST00000533521 ZFYVE28Q9HCC9 887 aa27.15■■□□□ 1.94
BEST1-207ENST00000533521 SH3RF3Q8TEJ3 882 aaPredicted RBP27.14■■□□□ 1.94
BEST1-207ENST00000533521 ERO1AQ96HE7 468 aa27.14■■□□□ 1.94
BEST1-207ENST00000533521 AATFQ9NY61 560 aaKnown RBP eCLIP27.14■■□□□ 1.94
BEST1-207ENST00000533521 HERC5Q9UII4 1024 aaKnown RBP27.14■■□□□ 1.94
BEST1-207ENST00000533521 DOCK1Q14185 1865 aa27.14■■□□□ 1.94
BEST1-207ENST00000533521 ADGRA1Q86SQ6 560 aa27.13■■□□□ 1.93
BEST1-207ENST00000533521 FAM43AQ8N2R8 423 aa27.13■■□□□ 1.93
BEST1-207ENST00000533521 PICK1Q9NRD5 415 aa27.13■■□□□ 1.93
BEST1-207ENST00000533521 PI4KBQ9UBF8 816 aa27.13■■□□□ 1.93
BEST1-207ENST00000533521 IDH1O75874 414 aaKnown RBP27.12■■□□□ 1.93
BEST1-207ENST00000533521 CYP7A1P22680 504 aa27.12■■□□□ 1.93
BEST1-207ENST00000533521 TAF1CQ15572 869 aaPredicted RBP27.12■■□□□ 1.93
BEST1-207ENST00000533521 FBXO46Q6PJ61 603 aaPredicted RBP27.12■■□□□ 1.93
BEST1-207ENST00000533521 ANKRD23Q86SG2 305 aa27.12■■□□□ 1.93
BEST1-207ENST00000533521 METTL16Q86W50 562 aaKnown RBP27.12■■□□□ 1.93
BEST1-207ENST00000533521 CCDC85CA6NKD9 419 aa27.11■■□□□ 1.93
BEST1-207ENST00000533521 BTBD19C9JJ37 291 aa27.11■■□□□ 1.93
BEST1-207ENST00000533521 PTPRAP18433 802 aa27.11■■□□□ 1.93
BEST1-207ENST00000533521 RGS19P49795 217 aa27.11■■□□□ 1.93
BEST1-207ENST00000533521 SP3Q02447 781 aa27.11■■□□□ 1.93
BEST1-207ENST00000533521 TBC1D2Q9BYX2 928 aa27.11■■□□□ 1.93
BEST1-207ENST00000533521 LRRCC1Q9C099 1032 aa27.1■■□□□ 1.93
BEST1-207ENST00000533521 ANTXR1Q9H6X2 564 aa27.1■■□□□ 1.93
BEST1-207ENST00000533521 XPO5Q9HAV4 1204 aaKnown RBP eCLIP27.1■■□□□ 1.93
BEST1-207ENST00000533521 PHIPQ8WWQ0 1821 aa27.09■■□□□ 1.93
BEST1-207ENST00000533521 TLR2O60603 784 aa27.09■■□□□ 1.93
BEST1-207ENST00000533521 ATP5JP18859 108 aa27.09■■□□□ 1.93
BEST1-207ENST00000533521 ARHGEF6Q15052 776 aa27.09■■□□□ 1.93
BEST1-207ENST00000533521 FOXP4Q8IVH2 680 aaPredicted RBP27.09■■□□□ 1.93
BEST1-207ENST00000533521 DCTPP1Q9H773 170 aa27.09■■□□□ 1.93
BEST1-207ENST00000533521 AFG3L2Q9Y4W6 797 aa27.09■■□□□ 1.93
BEST1-207ENST00000533521 FLT1P17948 1338 aa27.09■■□□□ 1.93
BEST1-207ENST00000533521 APBB1O00213 710 aa27.08■■□□□ 1.93
BEST1-207ENST00000533521 MOGSQ13724 837 aa27.08■■□□□ 1.93
BEST1-207ENST00000533521 FASTKD5Q7L8L6 764 aaKnown RBP27.08■■□□□ 1.93
BEST1-207ENST00000533521 MAGEB6Q8N7X4 407 aa27.08■■□□□ 1.93
BEST1-207ENST00000533521 TGFBRAP1Q8WUH2 860 aa27.08■■□□□ 1.93
BEST1-207ENST00000533521 ZHX2Q9Y6X8 837 aa27.08■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms