RNA–Protein interactions for RNA: ENST00000533487.1

VPS51-211, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 3

Gene VPS51, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-211ENST00000533487 TSHZ3Q63HK5 1081 aa25.31■■□□□ 1.64
VPS51-211ENST00000533487 RGMBQ6NW40 437 aa25.31■■□□□ 1.64
VPS51-211ENST00000533487 PLEKHM2Q8IWE5 1019 aa25.31■■□□□ 1.64
VPS51-211ENST00000533487 SH3RF3Q8TEJ3 882 aaPredicted RBP25.31■■□□□ 1.64
VPS51-211ENST00000533487 RIOK1Q9BRS2 568 aaKnown RBP25.31■■□□□ 1.64
VPS51-211ENST00000533487 HTRA3P83110 453 aa25.3■■□□□ 1.64
VPS51-211ENST00000533487 OSBPL5Q9H0X9 879 aaPredicted RBP25.3■■□□□ 1.64
VPS51-211ENST00000533487 ANGEL1Q9UNK9 670 aaKnown RBP25.3■■□□□ 1.64
VPS51-211ENST00000533487 ANKRD13AQ8IZ07 590 aa25.29■■□□□ 1.64
VPS51-211ENST00000533487 CRNKL1Q9BZJ0 848 aaKnown RBP25.29■■□□□ 1.64
VPS51-211ENST00000533487 THSD7BQ9C0I4 1608 aa25.28■■□□□ 1.64
VPS51-211ENST00000533487 RNF113AO15541 343 aaKnown RBP25.28■■□□□ 1.64
VPS51-211ENST00000533487 USP2O75604 605 aaPredicted RBP25.28■■□□□ 1.64
VPS51-211ENST00000533487 MAP3K10Q02779 954 aa25.28■■□□□ 1.64
VPS51-211ENST00000533487 PICALMQ13492 652 aa25.28■■□□□ 1.64
VPS51-211ENST00000533487 ZSCAN29Q8IWY8 852 aaPredicted RBP25.28■■□□□ 1.64
VPS51-211ENST00000533487 MIGA1Q8NAN2 632 aa25.28■■□□□ 1.64
VPS51-211ENST00000533487 CSRNP1Q96S65 589 aa25.28■■□□□ 1.64
VPS51-211ENST00000533487 ZNF341Q9BYN7 854 aa25.28■■□□□ 1.64
VPS51-211ENST00000533487 DDX4Q9NQI0 724 aaKnown RBP25.28■■□□□ 1.64
VPS51-211ENST00000533487 MKRN1Q9UHC7 482 aaKnown RBP25.28■■□□□ 1.64
VPS51-211ENST00000533487 TAOK2Q9UL54 1235 aa25.28■■□□□ 1.64
VPS51-211ENST00000533487 MYH1P12882 1939 aa25.27■■□□□ 1.64
VPS51-211ENST00000533487 TBC1D12O60347 775 aa25.27■■□□□ 1.64
VPS51-211ENST00000533487 MAP2K2P36507 400 aa25.27■■□□□ 1.64
VPS51-211ENST00000533487 NOGQ13253 232 aa25.27■■□□□ 1.64
VPS51-211ENST00000533487 JMYQ8N9B5 988 aa25.27■■□□□ 1.64
VPS51-211ENST00000533487 APPBP2Q92624 585 aa25.27■■□□□ 1.64
VPS51-211ENST00000533487 CAPNS2Q96L46 248 aa25.27■■□□□ 1.64
VPS51-211ENST00000533487 FSD1Q9BTV5 496 aa25.27■■□□□ 1.64
VPS51-211ENST00000533487 FLT1P17948 1338 aa25.27■■□□□ 1.64
VPS51-211ENST00000533487 WDR33Q9C0J8 1336 aaKnown RBP25.27■■□□□ 1.64
VPS51-211ENST00000533487 USP5P45974 858 aa25.26■■□□□ 1.63
VPS51-211ENST00000533487 ZNF157P51786 506 aaPredicted RBP25.26■■□□□ 1.63
VPS51-211ENST00000533487 DYNLL1P63167 89 aaKnown RBP25.26■■□□□ 1.63
VPS51-211ENST00000533487 REM2Q8IYK8 340 aaPredicted RBP25.26■■□□□ 1.63
VPS51-211ENST00000533487 TGFBRAP1Q8WUH2 860 aa25.26■■□□□ 1.63
VPS51-211ENST00000533487 CCDC136Q96JN2 1154 aa25.26■■□□□ 1.63
VPS51-211ENST00000533487 UBE2Q2LH0YL09 131 aa25.25■■□□□ 1.63
VPS51-211ENST00000533487 VEGFBP49765 207 aa25.25■■□□□ 1.63
VPS51-211ENST00000533487 PAXIP1Q6ZW49 1069 aaPredicted RBP25.25■■□□□ 1.63
VPS51-211ENST00000533487 AIDAQ96BJ3 306 aa25.25■■□□□ 1.63
VPS51-211ENST00000533487 ATP8A2Q9NTI2 1148 aa25.25■■□□□ 1.63
VPS51-211ENST00000533487 PI4KBQ9UBF8 816 aa25.25■■□□□ 1.63
VPS51-211ENST00000533487 HERC5Q9UII4 1024 aaKnown RBP25.25■■□□□ 1.63
VPS51-211ENST00000533487 OTOFQ9HC10 1997 aa25.25■■□□□ 1.63
VPS51-211ENST00000533487 MAP3K9P80192 1104 aa25.24■■□□□ 1.63
VPS51-211ENST00000533487 CDAN1Q8IWY9 1227 aa25.24■■□□□ 1.63
VPS51-211ENST00000533487 ZFPM1Q8IX07 1006 aa25.24■■□□□ 1.63
VPS51-211ENST00000533487 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.24■■□□□ 1.63
VPS51-211ENST00000533487 ZNF112Q9UJU3 913 aa25.24■■□□□ 1.63
VPS51-211ENST00000533487 NAV1Q8NEY1 1877 aa25.23■■□□□ 1.63
VPS51-211ENST00000533487 LAMB1P07942 1786 aa25.23■■□□□ 1.63
VPS51-211ENST00000533487 DDTLA6NHG4 134 aaPredicted RBP25.23■■□□□ 1.63
VPS51-211ENST00000533487 HLA-DOAP06340 250 aa25.23■■□□□ 1.63
VPS51-211ENST00000533487 SLC10A3P09131 477 aa25.23■■□□□ 1.63
VPS51-211ENST00000533487 GNAT2P19087 354 aa25.23■■□□□ 1.63
VPS51-211ENST00000533487 PRKG1Q13976 671 aa25.23■■□□□ 1.63
VPS51-211ENST00000533487 SH3BP5LQ7L8J4 393 aa25.23■■□□□ 1.63
VPS51-211ENST00000533487 FOXP4Q8IVH2 680 aaPredicted RBP25.23■■□□□ 1.63
VPS51-211ENST00000533487 DDRGK1Q96HY6 314 aa25.23■■□□□ 1.63
VPS51-211ENST00000533487 CSADQ9Y600 493 aa25.23■■□□□ 1.63
VPS51-211ENST00000533487 CYP4F22Q6NT55 531 aa25.22■■□□□ 1.63
VPS51-211ENST00000533487 MOB2Q70IA6 237 aa25.22■■□□□ 1.63
VPS51-211ENST00000533487 TTC6Q86TZ1 520 aa25.22■■□□□ 1.63
VPS51-211ENST00000533487 MAPKAPK5Q8IW41 473 aa25.22■■□□□ 1.63
VPS51-211ENST00000533487 SLC10A4Q96EP9 437 aa25.22■■□□□ 1.63
VPS51-211ENST00000533487 DDX60LQ5H9U9 1706 aaKnown RBP25.22■■□□□ 1.63
VPS51-211ENST00000533487 TRIM6-TRIM34B2RNG4 842 aa25.21■■□□□ 1.63
VPS51-211ENST00000533487 MBD4O95243 580 aa25.21■■□□□ 1.63
VPS51-211ENST00000533487 ZBTB48P10074 688 aaPredicted RBP25.21■■□□□ 1.63
VPS51-211ENST00000533487 GIMAP6Q6P9H5 292 aa25.21■■□□□ 1.63
VPS51-211ENST00000533487 METTL16Q86W50 562 aaKnown RBP25.21■■□□□ 1.63
VPS51-211ENST00000533487 LCORLQ8N3X6 602 aa25.21■■□□□ 1.63
VPS51-211ENST00000533487 FAM155AB1AL88 458 aaPredicted RBP25.2■■□□□ 1.62
VPS51-211ENST00000533487 HIP1O00291 1037 aa25.2■■□□□ 1.62
VPS51-211ENST00000533487 PDE4AP27815 886 aa25.2■■□□□ 1.62
VPS51-211ENST00000533487 ZMYM1Q5SVZ6 1142 aa25.2■■□□□ 1.62
VPS51-211ENST00000533487 RASAL3Q86YV0 1011 aa25.2■■□□□ 1.62
VPS51-211ENST00000533487 WRNIP1Q96S55 665 aa25.2■■□□□ 1.62
VPS51-211ENST00000533487 PUS7LQ9H0K6 701 aaKnown RBP25.2■■□□□ 1.62
VPS51-211ENST00000533487 EHD4Q9H223 541 aa25.2■■□□□ 1.62
VPS51-211ENST00000533487 NOL9Q5SY16 702 aaKnown RBP25.19■■□□□ 1.62
VPS51-211ENST00000533487 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.19■■□□□ 1.62
VPS51-211ENST00000533487 MIGA2Q7L4E1 593 aa25.19■■□□□ 1.62
VPS51-211ENST00000533487 AMOTL1Q8IY63 956 aa25.19■■□□□ 1.62
VPS51-211ENST00000533487 ARMT1Q9H993 441 aa25.19■■□□□ 1.62
VPS51-211ENST00000533487 CEP350Q5VT06 3117 aa25.18■■□□□ 1.62
VPS51-211ENST00000533487 MAP2K1Q02750 393 aaPredicted RBP25.18■■□□□ 1.62
VPS51-211ENST00000533487 OSBP2Q969R2 916 aa25.18■■□□□ 1.62
VPS51-211ENST00000533487 STRBPQ96SI9 672 aaKnown RBP25.18■■□□□ 1.62
VPS51-211ENST00000533487 DCP1AQ9NPI6 582 aaPredicted RBP25.18■■□□□ 1.62
VPS51-211ENST00000533487 HELLSQ9NRZ9 838 aa25.18■■□□□ 1.62
VPS51-211ENST00000533487 GINM1Q9NU53 330 aa25.18■■□□□ 1.62
VPS51-211ENST00000533487 PPP4R2Q9NY27 417 aa25.18■■□□□ 1.62
VPS51-211ENST00000533487 SIPA1L1O43166 1804 aa25.17■■□□□ 1.62
VPS51-211ENST00000533487 CTNND1O60716 968 aaKnown RBP25.17■■□□□ 1.62
VPS51-211ENST00000533487 TTC22Q5TAA0 569 aa25.17■■□□□ 1.62
VPS51-211ENST00000533487 TRIM34Q9BYJ4 488 aa25.17■■□□□ 1.62
VPS51-211ENST00000533487 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.17■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms