RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 CNNM3Q8NE01 707 aa19.11■□□□□ 0.65
CTSB-228ENST00000533455 IGDCC4Q8TDY8 1250 aa19.11■□□□□ 0.65
CTSB-228ENST00000533455 UBXN4Q92575 508 aa19.11■□□□□ 0.65
CTSB-228ENST00000533455 PHKBQ93100 1093 aa19.11■□□□□ 0.65
CTSB-228ENST00000533455 INTS13Q9NVM9 706 aa19.11■□□□□ 0.65
CTSB-228ENST00000533455 PCDHA5Q9Y5H7 936 aa19.11■□□□□ 0.65
CTSB-228ENST00000533455 PARP3Q9Y6F1 533 aa19.11■□□□□ 0.65
CTSB-228ENST00000533455 CDHR2Q9BYE9 1310 aa19.11■□□□□ 0.65
CTSB-228ENST00000533455 DOCK2Q92608 1830 aa19.1■□□□□ 0.65
CTSB-228ENST00000533455 UBN2Q6ZU65 1347 aa19.1■□□□□ 0.65
CTSB-228ENST00000533455 GOLGA6L9A6NEM1 432 aa19.1■□□□□ 0.65
CTSB-228ENST00000533455 EFCAB8A8MWE9 144 aa19.1■□□□□ 0.65
CTSB-228ENST00000533455 TPM1P09493 284 aa19.1■□□□□ 0.65
CTSB-228ENST00000533455 PNMA6AP0CW24 399 aaPredicted RBP19.1■□□□□ 0.65
CTSB-228ENST00000533455 MDM2Q00987 491 aaPredicted RBP19.1■□□□□ 0.65
CTSB-228ENST00000533455 ALX1Q15699 326 aa19.1■□□□□ 0.65
CTSB-228ENST00000533455 MPHOSPH8Q99549 860 aa19.1■□□□□ 0.65
CTSB-228ENST00000533455 UTP14AQ9BVJ6 771 aaKnown RBP19.1■□□□□ 0.65
CTSB-228ENST00000533455 LY9Q9HBG7 655 aa19.1■□□□□ 0.65
CTSB-228ENST00000533455 FAM217BQ9NTX9 383 aaPredicted RBP19.1■□□□□ 0.65
CTSB-228ENST00000533455 ANKRD36CQ5JPF3 1778 aa19.1■□□□□ 0.65
CTSB-228ENST00000533455 TOGARAM1Q9Y4F4 1720 aa19.1■□□□□ 0.65
CTSB-228ENST00000533455 SPATA31A3Q5VYP0 1347 aa19.1■□□□□ 0.65
CTSB-228ENST00000533455 WDR17Q8IZU2 1322 aa19.1■□□□□ 0.65
CTSB-228ENST00000533455 VWA3AA6NCI4 1184 aa19.1■□□□□ 0.65
CTSB-228ENST00000533455 GOLGA8AA7E2F4 631 aa19.1■□□□□ 0.65
CTSB-228ENST00000533455 METTL24Q5JXM2 366 aa19.1■□□□□ 0.65
CTSB-228ENST00000533455 SLC9C2Q5TAH2 1124 aa19.1■□□□□ 0.65
CTSB-228ENST00000533455 MICU3Q86XE3 530 aa19.1■□□□□ 0.65
CTSB-228ENST00000533455 KRI1Q8N9T8 703 aaKnown RBP19.1■□□□□ 0.65
CTSB-228ENST00000533455 MNS1Q8NEH6 495 aa19.1■□□□□ 0.65
CTSB-228ENST00000533455 SENP2Q9HC62 589 aa19.1■□□□□ 0.65
CTSB-228ENST00000533455 HOOK1Q9UJC3 728 aaKnown RBP19.1■□□□□ 0.65
CTSB-228ENST00000533455 PPP2R2CQ9Y2T4 447 aa19.1■□□□□ 0.65
CTSB-228ENST00000533455 B4E1Z4 1266 aa19.09■□□□□ 0.65
CTSB-228ENST00000533455 RXRAP19793 462 aa19.09■□□□□ 0.65
CTSB-228ENST00000533455 BMP6P22004 513 aa19.09■□□□□ 0.65
CTSB-228ENST00000533455 LIFRP42702 1097 aa19.09■□□□□ 0.65
CTSB-228ENST00000533455 PDE4BQ07343 736 aa19.09■□□□□ 0.65
CTSB-228ENST00000533455 PIH1D3Q9NQM4 214 aaKnown RBP19.09■□□□□ 0.65
CTSB-228ENST00000533455 CCDC66A2RUB6 948 aa19.08■□□□□ 0.65
CTSB-228ENST00000533455 ATP8B1O43520 1251 aa19.08■□□□□ 0.65
CTSB-228ENST00000533455 NT5DC1Q5TFE4 455 aa19.08■□□□□ 0.65
CTSB-228ENST00000533455 ST7Q9NRC1 585 aa19.08■□□□□ 0.65
CTSB-228ENST00000533455 URI1O94763 535 aaPredicted RBP19.08■□□□□ 0.64
CTSB-228ENST00000533455 FMNL1O95466 1100 aaPredicted RBP19.08■□□□□ 0.64
CTSB-228ENST00000533455 ZNF18P17022 549 aa19.08■□□□□ 0.64
CTSB-228ENST00000533455 PLA2G4AP47712 749 aa19.08■□□□□ 0.64
CTSB-228ENST00000533455 TMCO3Q6UWJ1 677 aa19.08■□□□□ 0.64
CTSB-228ENST00000533455 VGLL2Q8N8G2 317 aa19.08■□□□□ 0.64
CTSB-228ENST00000533455 WASF1Q92558 559 aa19.08■□□□□ 0.64
CTSB-228ENST00000533455 FAM89AQ96GI7 184 aa19.08■□□□□ 0.64
CTSB-228ENST00000533455 MAN1B1Q9UKM7 699 aa19.08■□□□□ 0.64
CTSB-228ENST00000533455 ZNF532Q9HCE3 1301 aa19.07■□□□□ 0.64
CTSB-228ENST00000533455 TCRBV5S4A2TA0A5A2 114 aa19.07■□□□□ 0.64
CTSB-228ENST00000533455 STX10O60499 249 aa19.07■□□□□ 0.64
CTSB-228ENST00000533455 NOSTRINQ8IVI9 506 aa19.07■□□□□ 0.64
CTSB-228ENST00000533455 STK11IPQ8N1F8 1099 aa19.07■□□□□ 0.64
CTSB-228ENST00000533455 CCDC85AQ96PX6 553 aaPredicted RBP19.07■□□□□ 0.64
CTSB-228ENST00000533455 NOL10Q9BSC4 688 aaKnown RBP19.07■□□□□ 0.64
CTSB-228ENST00000533455 CARD6Q9BX69 1037 aa19.07■□□□□ 0.64
CTSB-228ENST00000533455 DACH1Q9UI36 760 aa19.07■□□□□ 0.64
CTSB-228ENST00000533455 LRP5O75197 1615 aa19.07■□□□□ 0.64
CTSB-228ENST00000533455 PDE6AP16499 860 aa19.07■□□□□ 0.64
CTSB-228ENST00000533455 ARID4AP29374 1257 aaPredicted RBP19.07■□□□□ 0.64
CTSB-228ENST00000533455 SSRP1Q08945 709 aaKnown RBP19.07■□□□□ 0.64
CTSB-228ENST00000533455 GOLGA8FQ08AF8 430 aa19.07■□□□□ 0.64
CTSB-228ENST00000533455 GOLGA8DPQ0D2H9 430 aa19.07■□□□□ 0.64
CTSB-228ENST00000533455 KIF6Q6ZMV9 814 aa19.07■□□□□ 0.64
CTSB-228ENST00000533455 NFXL1Q6ZNB6 911 aa19.07■□□□□ 0.64
CTSB-228ENST00000533455 MLKLQ8NB16 471 aa19.07■□□□□ 0.64
CTSB-228ENST00000533455 ENOX1Q8TC92 643 aaKnown RBP19.07■□□□□ 0.64
CTSB-228ENST00000533455 BAG1Q99933 345 aaPredicted RBP19.07■□□□□ 0.64
CTSB-228ENST00000533455 STRCP1A6NGW2 1772 aa19.06■□□□□ 0.64
CTSB-228ENST00000533455 IFNAR1P17181 557 aa19.06■□□□□ 0.64
CTSB-228ENST00000533455 SARSP49591 514 aaKnown RBP19.06■□□□□ 0.64
CTSB-228ENST00000533455 POSTNQ15063 836 aa19.06■□□□□ 0.64
CTSB-228ENST00000533455 TMEM67Q5HYA8 995 aa19.06■□□□□ 0.64
CTSB-228ENST00000533455 TC2NQ8N9U0 490 aa19.06■□□□□ 0.64
CTSB-228ENST00000533455 TRIML1Q8N9V2 468 aa19.06■□□□□ 0.64
CTSB-228ENST00000533455 STRBPQ96SI9 672 aaKnown RBP19.06■□□□□ 0.64
CTSB-228ENST00000533455 FBXO2Q9UK22 296 aaPredicted RBP19.06■□□□□ 0.64
CTSB-228ENST00000533455 FOXN1O15353 648 aa19.05■□□□□ 0.64
CTSB-228ENST00000533455 APPP05067 770 aa19.05■□□□□ 0.64
CTSB-228ENST00000533455 PTPREP23469 700 aa19.05■□□□□ 0.64
CTSB-228ENST00000533455 LDHAL6AQ6ZMR3 332 aa19.05■□□□□ 0.64
CTSB-228ENST00000533455 SLC26A6Q9BXS9 759 aa19.05■□□□□ 0.64
CTSB-228ENST00000533455 TBC1D2BQ9UPU7 963 aa19.05■□□□□ 0.64
CTSB-228ENST00000533455 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.05■□□□□ 0.64
CTSB-228ENST00000533455 MMP1P03956 469 aa19.05■□□□□ 0.64
CTSB-228ENST00000533455 ITGA6P23229 1130 aa19.05■□□□□ 0.64
CTSB-228ENST00000533455 TOB1P50616 345 aaPredicted RBP19.05■□□□□ 0.64
CTSB-228ENST00000533455 MAP3K9P80192 1104 aa19.05■□□□□ 0.64
CTSB-228ENST00000533455 MORC3Q14149 939 aa19.05■□□□□ 0.64
CTSB-228ENST00000533455 SPECC1LQ69YQ0 1117 aa19.05■□□□□ 0.64
CTSB-228ENST00000533455 ZNF579Q8NAF0 562 aaKnown RBP19.05■□□□□ 0.64
CTSB-228ENST00000533455 TTLL11Q8NHH1 800 aa19.05■□□□□ 0.64
CTSB-228ENST00000533455 SLC12A7Q9Y666 1083 aa19.05■□□□□ 0.64
CTSB-228ENST00000533455 COL5A2P05997 1499 aaPredicted RBP19.04■□□□□ 0.64
CTSB-228ENST00000533455 IDH1O75874 414 aaKnown RBP19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms