RNA–Protein interactions for RNA: ENST00000533361.1

SIPA1-208, Transcript of signal-induced proliferation-associated 1, humanhuman

TSL 4

Gene SIPA1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-208ENST00000533361 SH3RF3Q8TEJ3 882 aaPredicted RBP27.05■■□□□ 1.92
SIPA1-208ENST00000533361 EDC3Q96F86 508 aaKnown RBP27.05■■□□□ 1.92
SIPA1-208ENST00000533361 DDX4Q9NQI0 724 aaKnown RBP27.05■■□□□ 1.92
SIPA1-208ENST00000533361 UNCXA6NJT0 531 aa27.04■■□□□ 1.92
SIPA1-208ENST00000533361 HAUS7Q99871 368 aa27.04■■□□□ 1.92
SIPA1-208ENST00000533361 ZNF341Q9BYN7 854 aa27.04■■□□□ 1.92
SIPA1-208ENST00000533361 PPP4CP60510 307 aa27.03■■□□□ 1.92
SIPA1-208ENST00000533361 SLC9C2Q5TAH2 1124 aa27.03■■□□□ 1.92
SIPA1-208ENST00000533361 MIGA1Q8NAN2 632 aa27.03■■□□□ 1.92
SIPA1-208ENST00000533361 CSRNP1Q96S65 589 aa27.03■■□□□ 1.92
SIPA1-208ENST00000533361 THSD7BQ9C0I4 1608 aa27.03■■□□□ 1.92
SIPA1-208ENST00000533361 ELP3Q9H9T3 547 aa27.03■■□□□ 1.92
SIPA1-208ENST00000533361 CSADQ9Y600 493 aa27.03■■□□□ 1.92
SIPA1-208ENST00000533361 DYNLL1P63167 89 aaKnown RBP27.02■■□□□ 1.92
SIPA1-208ENST00000533361 WRNIP1Q96S55 665 aa27.02■■□□□ 1.92
SIPA1-208ENST00000533361 SPRYD7Q5W111 196 aa27.01■■□□□ 1.91
SIPA1-208ENST00000533361 TSHZ3Q63HK5 1081 aa27.01■■□□□ 1.91
SIPA1-208ENST00000533361 TMED8Q6PL24 325 aaPredicted RBP27.01■■□□□ 1.91
SIPA1-208ENST00000533361 RFX7Q2KHR2 1363 aa27■■□□□ 1.91
SIPA1-208ENST00000533361 DDTLA6NHG4 134 aaPredicted RBP27■■□□□ 1.91
SIPA1-208ENST00000533361 PDE6AP16499 860 aa27■■□□□ 1.91
SIPA1-208ENST00000533361 CTCFP49711 727 aaPredicted RBP27■■□□□ 1.91
SIPA1-208ENST00000533361 PPP1R3FQ6ZSY5 799 aaPredicted RBP27■■□□□ 1.91
SIPA1-208ENST00000533361 SH3BP5LQ7L8J4 393 aa27■■□□□ 1.91
SIPA1-208ENST00000533361 REM2Q8IYK8 340 aaPredicted RBP27■■□□□ 1.91
SIPA1-208ENST00000533361 DDX55Q8NHQ9 600 aaKnown RBP eCLIP27■■□□□ 1.91
SIPA1-208ENST00000533361 TGFBRAP1Q8WUH2 860 aa27■■□□□ 1.91
SIPA1-208ENST00000533361 WNK4Q96J92 1243 aa27■■□□□ 1.91
SIPA1-208ENST00000533361 NPM3O75607 178 aaKnown RBP26.99■■□□□ 1.91
SIPA1-208ENST00000533361 VGLL4Q14135 290 aa26.99■■□□□ 1.91
SIPA1-208ENST00000533361 DDX24Q9GZR7 859 aaKnown RBP eCLIP26.99■■□□□ 1.91
SIPA1-208ENST00000533361 PRDM10Q9NQV6 1147 aa26.99■■□□□ 1.91
SIPA1-208ENST00000533361 ZNF532Q9HCE3 1301 aa26.98■■□□□ 1.91
SIPA1-208ENST00000533361 DOCK2Q92608 1830 aa26.98■■□□□ 1.91
SIPA1-208ENST00000533361 CERS3Q8IU89 383 aa26.98■■□□□ 1.91
SIPA1-208ENST00000533361 MAPKAPK5Q8IW41 473 aa26.98■■□□□ 1.91
SIPA1-208ENST00000533361 ZKSCAN4Q969J2 545 aaPredicted RBP26.98■■□□□ 1.91
SIPA1-208ENST00000533361 OSBPL5Q9H0X9 879 aaPredicted RBP26.98■■□□□ 1.91
SIPA1-208ENST00000533361 MAGEB6P1A0A0J9YX57 407 aa26.97■■□□□ 1.91
SIPA1-208ENST00000533361 ERC2O15083 957 aa26.97■■□□□ 1.91
SIPA1-208ENST00000533361 IGHDP01880 384 aa26.97■■□□□ 1.91
SIPA1-208ENST00000533361 B4GALNT3Q6L9W6 998 aa26.97■■□□□ 1.91
SIPA1-208ENST00000533361 OTUD7AQ8TE49 926 aaPredicted RBP26.97■■□□□ 1.91
SIPA1-208ENST00000533361 TTC41PQ6P2S7 1318 aa26.96■■□□□ 1.91
SIPA1-208ENST00000533361 CA12O43570 354 aa26.96■■□□□ 1.91
SIPA1-208ENST00000533361 ZBTB48P10074 688 aaPredicted RBP26.96■■□□□ 1.91
SIPA1-208ENST00000533361 USP5P45974 858 aa26.96■■□□□ 1.91
SIPA1-208ENST00000533361 OPTNQ96CV9 577 aa26.96■■□□□ 1.91
SIPA1-208ENST00000533361 TSKSQ9UJT2 592 aa26.96■■□□□ 1.91
SIPA1-208ENST00000533361 MX1P20591 662 aa26.95■■□□□ 1.9
SIPA1-208ENST00000533361 INPP5BP32019 993 aa26.95■■□□□ 1.9
SIPA1-208ENST00000533361 SREBF2Q12772 1141 aa26.95■■□□□ 1.9
SIPA1-208ENST00000533361 ZSCAN25Q6NSZ9 544 aa26.95■■□□□ 1.9
SIPA1-208ENST00000533361 LBX1P52954 281 aa26.94■■□□□ 1.9
SIPA1-208ENST00000533361 OTOFQ9HC10 1997 aa26.94■■□□□ 1.9
SIPA1-208ENST00000533361 FLT1P17948 1338 aa26.93■■□□□ 1.9
SIPA1-208ENST00000533361 MANSC4A6NHS7 340 aaPredicted RBP26.93■■□□□ 1.9
SIPA1-208ENST00000533361 TRPA1O75762 1119 aa26.93■■□□□ 1.9
SIPA1-208ENST00000533361 HSPA8P11142 646 aaKnown RBP26.93■■□□□ 1.9
SIPA1-208ENST00000533361 ADD2P35612 726 aa26.93■■□□□ 1.9
SIPA1-208ENST00000533361 SMC5Q8IY18 1101 aa26.93■■□□□ 1.9
SIPA1-208ENST00000533361 CNKSR2Q8WXI2 1034 aa26.93■■□□□ 1.9
SIPA1-208ENST00000533361 OTUD5Q96G74 571 aa26.93■■□□□ 1.9
SIPA1-208ENST00000533361 XPO5Q9HAV4 1204 aaKnown RBP eCLIP26.93■■□□□ 1.9
SIPA1-208ENST00000533361 RNF186Q9NXI6 227 aa26.93■■□□□ 1.9
SIPA1-208ENST00000533361 SAP30BPQ9UHR5 308 aaKnown RBP26.93■■□□□ 1.9
SIPA1-208ENST00000533361 ZNF112Q9UJU3 913 aa26.93■■□□□ 1.9
SIPA1-208ENST00000533361 SNCAIPQ9Y6H5 919 aa26.93■■□□□ 1.9
SIPA1-208ENST00000533361 GLRX3O76003 335 aaKnown RBP26.92■■□□□ 1.9
SIPA1-208ENST00000533361 SLURP2P0DP57 97 aa26.92■■□□□ 1.9
SIPA1-208ENST00000533361 GJA5P36382 358 aa26.92■■□□□ 1.9
SIPA1-208ENST00000533361 TM4SF4P48230 202 aa26.92■■□□□ 1.9
SIPA1-208ENST00000533361 LNPKQ9C0E8 428 aa26.92■■□□□ 1.9
SIPA1-208ENST00000533361 DHX36Q9H2U1 1008 aaKnown RBP26.92■■□□□ 1.9
SIPA1-208ENST00000533361 ATRNL1Q5VV63 1379 aa26.92■■□□□ 1.9
SIPA1-208ENST00000533361 TCRBV5S4A2TA0A5A2 114 aa26.91■■□□□ 1.9
SIPA1-208ENST00000533361 SLFNL1Q499Z3 407 aa26.91■■□□□ 1.9
SIPA1-208ENST00000533361 ERO1BQ86YB8 467 aa26.91■■□□□ 1.9
SIPA1-208ENST00000533361 RIOK1Q9BRS2 568 aaKnown RBP26.91■■□□□ 1.9
SIPA1-208ENST00000533361 TRIM34Q9BYJ4 488 aa26.91■■□□□ 1.9
SIPA1-208ENST00000533361 CRNKL1Q9BZJ0 848 aaKnown RBP26.91■■□□□ 1.9
SIPA1-208ENST00000533361 PALD1Q9ULE6 856 aa26.91■■□□□ 1.9
SIPA1-208ENST00000533361 FAM196BA6NMK8 535 aa26.9■■□□□ 1.9
SIPA1-208ENST00000533361 INHBEP58166 350 aa26.9■■□□□ 1.9
SIPA1-208ENST00000533361 PI4KBQ9UBF8 816 aa26.9■■□□□ 1.9
SIPA1-208ENST00000533361 COL2A1P02458 1487 aaPredicted RBP26.89■■□□□ 1.9
SIPA1-208ENST00000533361 SPDYE5A6NIY4 337 aa26.89■■□□□ 1.9
SIPA1-208ENST00000533361 HLA-DOAP06340 250 aa26.89■■□□□ 1.9
SIPA1-208ENST00000533361 MAP3K10Q02779 954 aa26.89■■□□□ 1.9
SIPA1-208ENST00000533361 UBE3CQ15386 1083 aa26.89■■□□□ 1.9
SIPA1-208ENST00000533361 SLC4A8Q2Y0W8 1093 aa26.89■■□□□ 1.9
SIPA1-208ENST00000533361 KBTBD3Q8NAB2 608 aa26.89■■□□□ 1.9
SIPA1-208ENST00000533361 PI4K2BQ8TCG2 481 aa26.89■■□□□ 1.9
SIPA1-208ENST00000533361 ARMT1Q9H993 441 aa26.89■■□□□ 1.9
SIPA1-208ENST00000533361 SAGE1Q9NXZ1 904 aa26.89■■□□□ 1.9
SIPA1-208ENST00000533361 PHF20L1A8MW92 1017 aa26.88■■□□□ 1.89
SIPA1-208ENST00000533361 TBC1D12O60347 775 aa26.88■■□□□ 1.89
SIPA1-208ENST00000533361 LCORLQ8N3X6 602 aa26.88■■□□□ 1.89
SIPA1-208ENST00000533361 CRACR2BQ8N4Y2 399 aaPredicted RBP26.88■■□□□ 1.89
SIPA1-208ENST00000533361 PICK1Q9NRD5 415 aa26.88■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms