RNA–Protein interactions for RNA: ENST00000533350.1

PICALM-221, Transcript of phosphatidylinositol binding clathrin assembly protein, humanhuman

TSL 3

Gene PICALM, Length 541 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PICALM-221ENST00000533350 UBP1Q9NZI7 540 aa7.02□□□□□ -1.29
PICALM-221ENST00000533350 AP4E1Q9UPM8 1137 aa7.02□□□□□ -1.29
PICALM-221ENST00000533350 F13A1P00488 732 aa7.01□□□□□ -1.29
PICALM-221ENST00000533350 SEZ6Q53EL9 994 aa7.01□□□□□ -1.29
PICALM-221ENST00000533350 FBXW10Q5XX13 1052 aa7.01□□□□□ -1.29
PICALM-221ENST00000533350 MPRIPQ6WCQ1 1025 aa7.01□□□□□ -1.29
PICALM-221ENST00000533350 FAM196AQ6ZSG2 479 aa7.01□□□□□ -1.29
PICALM-221ENST00000533350 C12orf50Q8NA57 414 aaPredicted RBP7.01□□□□□ -1.29
PICALM-221ENST00000533350 TANGO6Q9C0B7 1094 aa7.01□□□□□ -1.29
PICALM-221ENST00000533350 ROBO2Q9HCK4 1378 aa7□□□□□ -1.29
PICALM-221ENST00000533350 AOC2O75106 756 aa7□□□□□ -1.29
PICALM-221ENST00000533350 SSBP05455 408 aaKnown RBP eCLIP7□□□□□ -1.29
PICALM-221ENST00000533350 CTSBP07858 339 aa7□□□□□ -1.29
PICALM-221ENST00000533350 MPP2Q14168 576 aa7□□□□□ -1.29
PICALM-221ENST00000533350 WIPI1Q5MNZ9 446 aaPredicted RBP7□□□□□ -1.29
PICALM-221ENST00000533350 SHISA2Q6UWI4 295 aa7□□□□□ -1.29
PICALM-221ENST00000533350 SREK1Q8WXA9 508 aaKnown RBP7□□□□□ -1.29
PICALM-221ENST00000533350 BUD13Q9BRD0 619 aaKnown RBP eCLIP7□□□□□ -1.291e-10■□□□□ 11.1
PICALM-221ENST00000533350 TINF2Q9BSI4 451 aa7□□□□□ -1.29
PICALM-221ENST00000533350 NT5C1AQ9BXI3 368 aa7□□□□□ -1.29
PICALM-221ENST00000533350 PRAMEF27A3QJZ7 478 aa6.99□□□□□ -1.29
PICALM-221ENST00000533350 DCDC2CA8MYV0 355 aa6.99□□□□□ -1.29
PICALM-221ENST00000533350 C9orf172C9J069 976 aa6.99□□□□□ -1.29
PICALM-221ENST00000533350 GAS2O43903 313 aaKnown RBP6.99□□□□□ -1.29
PICALM-221ENST00000533350 WISP1O95388 367 aa6.99□□□□□ -1.29
PICALM-221ENST00000533350 GLB1P16278 677 aa6.99□□□□□ -1.29
PICALM-221ENST00000533350 NRG1Q02297 640 aaPredicted RBP6.99□□□□□ -1.29
PICALM-221ENST00000533350 RPL6Q02878 288 aaKnown RBP6.99□□□□□ -1.29
PICALM-221ENST00000533350 DOC2BQ14184 412 aa6.99□□□□□ -1.29
PICALM-221ENST00000533350 DYMQ7RTS9 669 aa6.99□□□□□ -1.29
PICALM-221ENST00000533350 AGGF1Q8N302 714 aaeCLIP6.99□□□□□ -1.29
PICALM-221ENST00000533350 GAL3ST3Q96A11 431 aa6.99□□□□□ -1.29
PICALM-221ENST00000533350 EAF1Q96JC9 268 aaPredicted RBP6.99□□□□□ -1.29
PICALM-221ENST00000533350 FERD3LQ96RJ6 166 aa6.99□□□□□ -1.29
PICALM-221ENST00000533350 NRSN2Q9GZP1 204 aa6.99□□□□□ -1.29
PICALM-221ENST00000533350 AKTIPQ9H8T0 292 aa6.99□□□□□ -1.29
PICALM-221ENST00000533350 PIDD1Q9HB75 910 aa6.99□□□□□ -1.29
PICALM-221ENST00000533350 SSU72Q9NP77 194 aaKnown RBP6.99□□□□□ -1.29
PICALM-221ENST00000533350 EFR3BQ9Y2G0 817 aa6.99□□□□□ -1.29
PICALM-221ENST00000533350 CSADQ9Y600 493 aa6.99□□□□□ -1.29
PICALM-221ENST00000533350 ZNF862O60290 1169 aa6.98□□□□□ -1.29
PICALM-221ENST00000533350 ATP2B1P20020 1258 aa6.98□□□□□ -1.29
PICALM-221ENST00000533350 GJA8P48165 433 aa6.98□□□□□ -1.29
PICALM-221ENST00000533350 ID3Q02535 119 aa6.98□□□□□ -1.29
PICALM-221ENST00000533350 MLECQ14165 292 aa6.98□□□□□ -1.29
PICALM-221ENST00000533350 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.98□□□□□ -1.29
PICALM-221ENST00000533350 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.98□□□□□ -1.29
PICALM-221ENST00000533350 KRTAP19-1Q8IUB9 90 aa6.98□□□□□ -1.29
PICALM-221ENST00000533350 SLC43A3Q8NBI5 491 aa6.98□□□□□ -1.29
PICALM-221ENST00000533350 FBXO27Q8NI29 283 aa6.98□□□□□ -1.29
PICALM-221ENST00000533350 DRC1Q96MC2 740 aa6.98□□□□□ -1.29
PICALM-221ENST00000533350 WDR18Q9BV38 432 aa6.98□□□□□ -1.29
PICALM-221ENST00000533350 CEP41Q9BYV8 373 aa6.98□□□□□ -1.29
PICALM-221ENST00000533350 PRKAG2Q9UGJ0 569 aa6.98□□□□□ -1.29
PICALM-221ENST00000533350 GREM1O60565 184 aa6.97□□□□□ -1.29
PICALM-221ENST00000533350 RNGTTO60942 597 aaKnown RBP6.97□□□□□ -1.29
PICALM-221ENST00000533350 CILPO75339 1184 aa6.97□□□□□ -1.29
PICALM-221ENST00000533350 DLGAP3O95886 979 aa6.97□□□□□ -1.29
PICALM-221ENST00000533350 GARTP22102 1010 aa6.97□□□□□ -1.29
PICALM-221ENST00000533350 CHRNA4P43681 627 aa6.97□□□□□ -1.29
PICALM-221ENST00000533350 NASPP49321 788 aaPredicted RBP6.97□□□□□ -1.29
PICALM-221ENST00000533350 ZNF165P49910 485 aa6.97□□□□□ -1.29
PICALM-221ENST00000533350 USP11P51784 963 aa6.97□□□□□ -1.29
PICALM-221ENST00000533350 ETF1P62495 437 aaKnown RBP6.97□□□□□ -1.29
PICALM-221ENST00000533350 PTPN11Q06124 597 aaPredicted RBP6.97□□□□□ -1.29
PICALM-221ENST00000533350 PDE4BQ07343 736 aa6.97□□□□□ -1.29
PICALM-221ENST00000533350 KIF4BQ2VIQ3 1234 aa6.97□□□□□ -1.29
PICALM-221ENST00000533350 ANKRD34AQ69YU3 496 aa6.97□□□□□ -1.29
PICALM-221ENST00000533350 GK5Q6ZS86 529 aa6.97□□□□□ -1.29
PICALM-221ENST00000533350 KIAA1211Q6ZU35 1233 aa6.97□□□□□ -1.29
PICALM-221ENST00000533350 ILDR2Q71H61 639 aa6.97□□□□□ -1.29
PICALM-221ENST00000533350 REC114Q7Z4M0 266 aa6.97□□□□□ -1.29
PICALM-221ENST00000533350 C12orf40Q86WS4 652 aa6.97□□□□□ -1.29
PICALM-221ENST00000533350 WDR89Q96FK6 387 aaPredicted RBP6.97□□□□□ -1.29
PICALM-221ENST00000533350 PLPPR2Q96GM1 343 aa6.97□□□□□ -1.29
PICALM-221ENST00000533350 CRBNQ96SW2 442 aa6.97□□□□□ -1.29
PICALM-221ENST00000533350 SNCAIPQ9Y6H5 919 aa6.97□□□□□ -1.29
PICALM-221ENST00000533350 SCO2A0A1W2PP80 73 aa6.96□□□□□ -1.3
PICALM-221ENST00000533350 F8W735 103 aaPredicted RBP6.96□□□□□ -1.3
PICALM-221ENST00000533350 GRIN3BO60391 1043 aa6.96□□□□□ -1.3
PICALM-221ENST00000533350 ALX3O95076 343 aa6.96□□□□□ -1.3
PICALM-221ENST00000533350 GTF2F1P35269 517 aaKnown RBP eCLIP6.96□□□□□ -1.3
PICALM-221ENST00000533350 COL9A2Q14055 689 aaPredicted RBP6.96□□□□□ -1.3
PICALM-221ENST00000533350 LRFN4Q6PJG9 635 aa6.96□□□□□ -1.3
PICALM-221ENST00000533350 CDC37L1Q7L3B6 337 aa6.96□□□□□ -1.3
PICALM-221ENST00000533350 LENG1Q96BZ8 264 aaPredicted RBP6.96□□□□□ -1.3
PICALM-221ENST00000533350 SEC16BQ96JE7 1060 aa6.96□□□□□ -1.3
PICALM-221ENST00000533350 TMPRSS13Q9BYE2 586 aa6.96□□□□□ -1.3
PICALM-221ENST00000533350 ATXN3LQ9H3M9 355 aa6.96□□□□□ -1.3
PICALM-221ENST00000533350 BRMS1Q9HCU9 246 aa6.96□□□□□ -1.3
PICALM-221ENST00000533350 KCNQ5Q9NR82 932 aa6.96□□□□□ -1.3
PICALM-221ENST00000533350 GINM1Q9NU53 330 aa6.96□□□□□ -1.3
PICALM-221ENST00000533350 FAM221AA4D161 298 aa6.95□□□□□ -1.3
PICALM-221ENST00000533350 MEGF11A6BM72 1044 aa6.95□□□□□ -1.3
PICALM-221ENST00000533350 ADH5P11766 374 aa6.95□□□□□ -1.3
PICALM-221ENST00000533350 ATF4P18848 351 aaPredicted RBP6.95□□□□□ -1.3
PICALM-221ENST00000533350 CRKP46108 304 aa6.95□□□□□ -1.3
PICALM-221ENST00000533350 SOX4Q06945 474 aaPredicted RBP6.95□□□□□ -1.3
PICALM-221ENST00000533350 INPP5AQ14642 412 aa6.95□□□□□ -1.3
PICALM-221ENST00000533350 SMG8Q8ND04 991 aaKnown RBP6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms