RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 VPS37DQ86XT2 251 aa14.15□□□□□ -0.14
TRAPPC4-213ENST00000533149 SMCR8Q8TEV9 937 aaPredicted RBP14.15□□□□□ -0.14
TRAPPC4-213ENST00000533149 GUCD1Q96NT3 240 aa14.15□□□□□ -0.14
TRAPPC4-213ENST00000533149 GTF3C3Q9Y5Q9 886 aa14.15□□□□□ -0.14
TRAPPC4-213ENST00000533149 BCAR3O75815 825 aa14.15□□□□□ -0.15
TRAPPC4-213ENST00000533149 NEFLP07196 543 aa14.15□□□□□ -0.15
TRAPPC4-213ENST00000533149 APOBEC3HQ6NTF7 200 aaKnown RBP14.15□□□□□ -0.15
TRAPPC4-213ENST00000533149 FRAT2O75474 233 aaPredicted RBP14.14□□□□□ -0.15
TRAPPC4-213ENST00000533149 HMGCRP04035 888 aa14.14□□□□□ -0.15
TRAPPC4-213ENST00000533149 SLC4A2P04920 1241 aa14.14□□□□□ -0.15
TRAPPC4-213ENST00000533149 RRP1P56182 461 aaKnown RBP14.14□□□□□ -0.15
TRAPPC4-213ENST00000533149 GRIK5Q16478 980 aa14.14□□□□□ -0.15
TRAPPC4-213ENST00000533149 TWISTNBQ3B726 338 aaPredicted RBP14.14□□□□□ -0.15
TRAPPC4-213ENST00000533149 HHIPL2Q6UWX4 724 aa14.14□□□□□ -0.15
TRAPPC4-213ENST00000533149 FAM151AQ8WW52 585 aa14.14□□□□□ -0.15
TRAPPC4-213ENST00000533149 DNAAF4Q8WXU2 420 aa14.14□□□□□ -0.15
TRAPPC4-213ENST00000533149 SYMPKQ92797 1274 aaKnown RBP14.14□□□□□ -0.15
TRAPPC4-213ENST00000533149 ZNF594Q96JF6 807 aaPredicted RBP14.14□□□□□ -0.15
TRAPPC4-213ENST00000533149 HMX1Q9NP08 348 aaPredicted RBP14.14□□□□□ -0.15
TRAPPC4-213ENST00000533149 SUGT1Q9Y2Z0 365 aa14.14□□□□□ -0.15
TRAPPC4-213ENST00000533149 UNC80Q8N2C7 3258 aa14.13□□□□□ -0.15
TRAPPC4-213ENST00000533149 A0A0G2JLL6 359 aaPredicted RBP14.13□□□□□ -0.15
TRAPPC4-213ENST00000533149 CHAF1AQ13111 956 aaPredicted RBP14.13□□□□□ -0.15
TRAPPC4-213ENST00000533149 LMBR1LQ6UX01 489 aa14.13□□□□□ -0.15
TRAPPC4-213ENST00000533149 G2E3Q7L622 706 aa14.13□□□□□ -0.15
TRAPPC4-213ENST00000533149 PRRT2Q7Z6L0 340 aaPredicted RBP14.13□□□□□ -0.15
TRAPPC4-213ENST00000533149 IRX6P78412 446 aaPredicted RBP14.12□□□□□ -0.15
TRAPPC4-213ENST00000533149 FLIIQ13045 1269 aa14.12□□□□□ -0.15
TRAPPC4-213ENST00000533149 FKBP5Q13451 457 aaPredicted RBP14.12□□□□□ -0.15
TRAPPC4-213ENST00000533149 CAVIN4Q5BKX8 364 aa14.12□□□□□ -0.15
TRAPPC4-213ENST00000533149 ZNF697Q5TEC3 545 aa14.12□□□□□ -0.15
TRAPPC4-213ENST00000533149 GADL1Q6ZQY3 521 aa14.12□□□□□ -0.15
TRAPPC4-213ENST00000533149 FBXO33Q7Z6M2 555 aa14.12□□□□□ -0.15
TRAPPC4-213ENST00000533149 SSH1Q8WYL5 1049 aa14.12□□□□□ -0.15
TRAPPC4-213ENST00000533149 PICK1Q9NRD5 415 aa14.12□□□□□ -0.15
TRAPPC4-213ENST00000533149 OGDHLQ9ULD0 1010 aa14.12□□□□□ -0.15
TRAPPC4-213ENST00000533149 ZHX2Q9Y6X8 837 aa14.12□□□□□ -0.15
TRAPPC4-213ENST00000533149 FAM161BQ96MY7 647 aa14.11□□□□□ -0.15
TRAPPC4-213ENST00000533149 IQSEC3Q9UPP2 1182 aaPredicted RBP14.11□□□□□ -0.15
TRAPPC4-213ENST00000533149 COL9A1P20849 921 aa14.1□□□□□ -0.15
TRAPPC4-213ENST00000533149 TCP10Q12799 353 aa14.1□□□□□ -0.15
TRAPPC4-213ENST00000533149 FAM110CQ1W6H9 321 aa14.1□□□□□ -0.15
TRAPPC4-213ENST00000533149 ALDH1L2Q3SY69 923 aa14.1□□□□□ -0.15
TRAPPC4-213ENST00000533149 SCYL3Q8IZE3 742 aa14.1□□□□□ -0.15
TRAPPC4-213ENST00000533149 ANKRD13CQ8N6S4 541 aa14.1□□□□□ -0.15
TRAPPC4-213ENST00000533149 MAFAQ8NHW3 353 aaPredicted RBP14.1□□□□□ -0.15
TRAPPC4-213ENST00000533149 RNF39Q9H2S5 420 aa14.1□□□□□ -0.15
TRAPPC4-213ENST00000533149 AFG3L2Q9Y4W6 797 aa14.1□□□□□ -0.15
TRAPPC4-213ENST00000533149 MROH5Q6ZUA9 1318 aa14.09□□□□□ -0.15
TRAPPC4-213ENST00000533149 PTPRAP18433 802 aa14.09□□□□□ -0.15
TRAPPC4-213ENST00000533149 MDM2Q00987 491 aaPredicted RBP14.09□□□□□ -0.15
TRAPPC4-213ENST00000533149 SMC4Q9NTJ3 1288 aa14.09□□□□□ -0.15
TRAPPC4-213ENST00000533149 PNMA3Q9UL41 463 aa14.09□□□□□ -0.15
TRAPPC4-213ENST00000533149 DDX60LQ5H9U9 1706 aaKnown RBP14.08□□□□□ -0.16
TRAPPC4-213ENST00000533149 COL2A1P02458 1487 aaPredicted RBP14.08□□□□□ -0.16
TRAPPC4-213ENST00000533149 MRPL50Q8N5N7 158 aaKnown RBP14.08□□□□□ -0.16
TRAPPC4-213ENST00000533149 FRAT1Q92837 279 aaPredicted RBP14.08□□□□□ -0.16
TRAPPC4-213ENST00000533149 CDX2Q99626 313 aaPredicted RBP14.08□□□□□ -0.16
TRAPPC4-213ENST00000533149 LBHD1Q9BQE6 289 aaPredicted RBP14.08□□□□□ -0.16
TRAPPC4-213ENST00000533149 AGTPBP1Q9UPW5 1226 aa14.08□□□□□ -0.16
TRAPPC4-213ENST00000533149 PFASO15067 1338 aa14.07□□□□□ -0.16
TRAPPC4-213ENST00000533149 PHF20L1A8MW92 1017 aa14.07□□□□□ -0.16
TRAPPC4-213ENST00000533149 GCLCP48506 637 aaPredicted RBP14.07□□□□□ -0.16
TRAPPC4-213ENST00000533149 EPHA10Q5JZY3 1008 aa14.07□□□□□ -0.16
TRAPPC4-213ENST00000533149 GRM8O00222 908 aa14.06□□□□□ -0.16
TRAPPC4-213ENST00000533149 COL6A1P12109 1028 aa14.06□□□□□ -0.16
TRAPPC4-213ENST00000533149 CDC42EP5Q6NZY7 148 aa14.06□□□□□ -0.16
TRAPPC4-213ENST00000533149 PUS3Q9BZE2 481 aaKnown RBP14.06□□□□□ -0.16
TRAPPC4-213ENST00000533149 GJD2Q9UKL4 321 aa14.06□□□□□ -0.16
TRAPPC4-213ENST00000533149 TRIM75PA6NK02 468 aa14.05□□□□□ -0.16
TRAPPC4-213ENST00000533149 NFIAQ12857 509 aa14.05□□□□□ -0.16
TRAPPC4-213ENST00000533149 TRIM32Q13049 653 aa14.05□□□□□ -0.16
TRAPPC4-213ENST00000533149 BEND3Q5T5X7 828 aa14.05□□□□□ -0.16
TRAPPC4-213ENST00000533149 MAP3K21Q5TCX8 1036 aa14.05□□□□□ -0.16
TRAPPC4-213ENST00000533149 C20orf194Q5TEA3 1177 aa14.05□□□□□ -0.16
TRAPPC4-213ENST00000533149 WDR66Q8TBY9 1149 aa14.05□□□□□ -0.16
TRAPPC4-213ENST00000533149 NOB1Q9ULX3 412 aaKnown RBP14.05□□□□□ -0.16
TRAPPC4-213ENST00000533149 LRRFIP2Q9Y608 721 aaKnown RBP14.05□□□□□ -0.16
TRAPPC4-213ENST00000533149 AK9Q5TCS8 1911 aa14.04□□□□□ -0.16
TRAPPC4-213ENST00000533149 IPO8O15397 1037 aaKnown RBP14.04□□□□□ -0.16
TRAPPC4-213ENST00000533149 CTNND1O60716 968 aaKnown RBP14.04□□□□□ -0.16
TRAPPC4-213ENST00000533149 PRKAR2AP13861 404 aaKnown RBP14.04□□□□□ -0.16
TRAPPC4-213ENST00000533149 LRRC26Q2I0M4 334 aa14.04□□□□□ -0.16
TRAPPC4-213ENST00000533149 ZKSCAN2Q63HK3 967 aa14.04□□□□□ -0.16
TRAPPC4-213ENST00000533149 SEMA6BQ9H3T3 888 aa14.04□□□□□ -0.16
TRAPPC4-213ENST00000533149 C9orf78Q9NZ63 289 aaPredicted RBP14.04□□□□□ -0.16
TRAPPC4-213ENST00000533149 FAM198AQ9UFP1 575 aa14.04□□□□□ -0.16
TRAPPC4-213ENST00000533149 DAGLAQ9Y4D2 1042 aa14.04□□□□□ -0.16
TRAPPC4-213ENST00000533149 TNFRSF10AO00220 468 aa14.03□□□□□ -0.16
TRAPPC4-213ENST00000533149 PDE8BO95263 885 aa14.03□□□□□ -0.16
TRAPPC4-213ENST00000533149 PABPC4Q13310 644 aaKnown RBP eCLIP14.03□□□□□ -0.168e-8■■■■□ 23
TRAPPC4-213ENST00000533149 PDE3AQ14432 1141 aa14.03□□□□□ -0.16
TRAPPC4-213ENST00000533149 METTL24Q5JXM2 366 aa14.03□□□□□ -0.16
TRAPPC4-213ENST00000533149 TRMT44Q8IYL2 757 aaKnown RBP14.03□□□□□ -0.16
TRAPPC4-213ENST00000533149 PROCA1Q8NCQ7 364 aaPredicted RBP14.03□□□□□ -0.16
TRAPPC4-213ENST00000533149 TRIB2Q92519 343 aa14.03□□□□□ -0.16
TRAPPC4-213ENST00000533149 USP40Q9NVE5 1235 aa14.03□□□□□ -0.16
TRAPPC4-213ENST00000533149 KIF16BQ96L93 1317 aa14.03□□□□□ -0.16
TRAPPC4-213ENST00000533149 DOCK3Q8IZD9 2030 aa14.03□□□□□ -0.16
TRAPPC4-213ENST00000533149 ENTPD3O75355 529 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms