RNA–Protein interactions for RNA: ENST00000533058.5

TRAPPC4-212, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 1,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-212ENST00000533058 TCP10Q12799 353 aa15.77■□□□□ 0.12
TRAPPC4-212ENST00000533058 B4GALNT3Q6L9W6 998 aa15.77■□□□□ 0.12
TRAPPC4-212ENST00000533058 SNRKQ9NRH2 765 aa15.77■□□□□ 0.12
TRAPPC4-212ENST00000533058 GJA5P36382 358 aa15.76■□□□□ 0.11
TRAPPC4-212ENST00000533058 ZAP70P43403 619 aa15.76■□□□□ 0.11
TRAPPC4-212ENST00000533058 PPP4CP60510 307 aa15.76■□□□□ 0.11
TRAPPC4-212ENST00000533058 MKRN3Q13064 507 aaKnown RBP15.76■□□□□ 0.11
TRAPPC4-212ENST00000533058 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.76■□□□□ 0.11
TRAPPC4-212ENST00000533058 OPTNQ96CV9 577 aa15.76■□□□□ 0.11
TRAPPC4-212ENST00000533058 WRNIP1Q96S55 665 aa15.76■□□□□ 0.11
TRAPPC4-212ENST00000533058 ELP3Q9H9T3 547 aa15.76■□□□□ 0.11
TRAPPC4-212ENST00000533058 SNCAIPQ9Y6H5 919 aa15.76■□□□□ 0.11
TRAPPC4-212ENST00000533058 MYH2Q9UKX2 1941 aa15.76■□□□□ 0.11
TRAPPC4-212ENST00000533058 ATRNL1Q5VV63 1379 aa15.75■□□□□ 0.11
TRAPPC4-212ENST00000533058 SPDYE5A6NIY4 337 aa15.75■□□□□ 0.11
TRAPPC4-212ENST00000533058 BAG3O95817 575 aa15.75■□□□□ 0.11
TRAPPC4-212ENST00000533058 NAA16Q6N069 864 aaPredicted RBP15.75■□□□□ 0.11
TRAPPC4-212ENST00000533058 ERO1BQ86YB8 467 aa15.75■□□□□ 0.11
TRAPPC4-212ENST00000533058 IFNL1Q8IU54 200 aa15.75■□□□□ 0.11
TRAPPC4-212ENST00000533058 ZFPM1Q8IX07 1006 aa15.75■□□□□ 0.11
TRAPPC4-212ENST00000533058 CCDC136Q96JN2 1154 aa15.75■□□□□ 0.11
TRAPPC4-212ENST00000533058 MS4A4AQ96JQ5 239 aa15.75■□□□□ 0.11
TRAPPC4-212ENST00000533058 DDX4Q9NQI0 724 aaKnown RBP15.75■□□□□ 0.11
TRAPPC4-212ENST00000533058 AKAP11Q9UKA4 1901 aa15.74■□□□□ 0.11
TRAPPC4-212ENST00000533058 PLCG2P16885 1265 aa15.74■□□□□ 0.11
TRAPPC4-212ENST00000533058 GTF2A2P52657 109 aa15.74■□□□□ 0.11
TRAPPC4-212ENST00000533058 NOL9Q5SY16 702 aaKnown RBP15.74■□□□□ 0.11
TRAPPC4-212ENST00000533058 OTUD7BQ6GQQ9 843 aa15.74■□□□□ 0.11
TRAPPC4-212ENST00000533058 MIGA2Q7L4E1 593 aa15.74■□□□□ 0.11
TRAPPC4-212ENST00000533058 SH3BP5LQ7L8J4 393 aa15.74■□□□□ 0.11
TRAPPC4-212ENST00000533058 CERS3Q8IU89 383 aa15.74■□□□□ 0.11
TRAPPC4-212ENST00000533058 PIH1D3Q9NQM4 214 aaKnown RBP15.74■□□□□ 0.11
TRAPPC4-212ENST00000533058 COL2A1P02458 1487 aaPredicted RBP15.73■□□□□ 0.11
TRAPPC4-212ENST00000533058 TBC1D12O60347 775 aa15.73■□□□□ 0.11
TRAPPC4-212ENST00000533058 PPATQ06203 517 aa15.73■□□□□ 0.11
TRAPPC4-212ENST00000533058 SMC5Q8IY18 1101 aa15.73■□□□□ 0.11
TRAPPC4-212ENST00000533058 ZKSCAN4Q969J2 545 aaPredicted RBP15.73■□□□□ 0.11
TRAPPC4-212ENST00000533058 GPATCH3Q96I76 525 aa15.73■□□□□ 0.11
TRAPPC4-212ENST00000533058 NOL10Q9BSC4 688 aaKnown RBP15.73■□□□□ 0.11
TRAPPC4-212ENST00000533058 LAMB1P07942 1786 aa15.72■□□□□ 0.11
TRAPPC4-212ENST00000533058 DDTLA6NHG4 134 aaPredicted RBP15.72■□□□□ 0.11
TRAPPC4-212ENST00000533058 IGF2BP3O00425 579 aaKnown RBP eCLIP15.72■□□□□ 0.11
TRAPPC4-212ENST00000533058 PPIL2Q13356 520 aa15.72■□□□□ 0.11
TRAPPC4-212ENST00000533058 TTF1Q15361 905 aaPredicted RBP15.72■□□□□ 0.11
TRAPPC4-212ENST00000533058 ERICH6BQ5W0A0 696 aa15.72■□□□□ 0.11
TRAPPC4-212ENST00000533058 PTPN18Q99952 460 aa15.72■□□□□ 0.11
TRAPPC4-212ENST00000533058 LNPKQ9C0E8 428 aa15.72■□□□□ 0.11
TRAPPC4-212ENST00000533058 PHF20L1A8MW92 1017 aa15.71■□□□□ 0.11
TRAPPC4-212ENST00000533058 GPR25O00155 361 aa15.71■□□□□ 0.11
TRAPPC4-212ENST00000533058 TBC1D8O95759 1140 aa15.71■□□□□ 0.11
TRAPPC4-212ENST00000533058 INPP5BP32019 993 aa15.71■□□□□ 0.11
TRAPPC4-212ENST00000533058 MAP3K12Q12852 859 aa15.71■□□□□ 0.11
TRAPPC4-212ENST00000533058 PICALMQ13492 652 aa15.71■□□□□ 0.11
TRAPPC4-212ENST00000533058 ZSCAN29Q8IWY8 852 aaPredicted RBP15.71■□□□□ 0.11
TRAPPC4-212ENST00000533058 CNKSR2Q8WXI2 1034 aa15.71■□□□□ 0.11
TRAPPC4-212ENST00000533058 OTUD5Q96G74 571 aa15.71■□□□□ 0.11
TRAPPC4-212ENST00000533058 OSBPL5Q9H0X9 879 aaPredicted RBP15.71■□□□□ 0.11
TRAPPC4-212ENST00000533058 DHX36Q9H2U1 1008 aaKnown RBP15.71■□□□□ 0.11
TRAPPC4-212ENST00000533058 ZCCHC17Q9NP64 241 aaKnown RBP15.71■□□□□ 0.11
TRAPPC4-212ENST00000533058 OTOFQ9HC10 1997 aa15.71■□□□□ 0.1
TRAPPC4-212ENST00000533058 IRF6O14896 467 aa15.7■□□□□ 0.1
TRAPPC4-212ENST00000533058 IDH1O75874 414 aaKnown RBP15.7■□□□□ 0.1
TRAPPC4-212ENST00000533058 CETPP11597 493 aa15.7■□□□□ 0.1
TRAPPC4-212ENST00000533058 SNAPC2Q13487 334 aa15.7■□□□□ 0.1
TRAPPC4-212ENST00000533058 ADGRA1Q86SQ6 560 aa15.7■□□□□ 0.1
TRAPPC4-212ENST00000533058 CHD1LQ86WJ1 897 aa15.7■□□□□ 0.1
TRAPPC4-212ENST00000533058 TEX11Q8IYF3 940 aa15.7■□□□□ 0.1
TRAPPC4-212ENST00000533058 SH3RF3Q8TEJ3 882 aaPredicted RBP15.7■□□□□ 0.1
TRAPPC4-212ENST00000533058 BRI3BPQ8WY22 251 aa15.7■□□□□ 0.1
TRAPPC4-212ENST00000533058 ANTXR1Q9H6X2 564 aa15.7■□□□□ 0.1
TRAPPC4-212ENST00000533058 PPP4R2Q9NY27 417 aa15.7■□□□□ 0.1
TRAPPC4-212ENST00000533058 AATFQ9NY61 560 aaKnown RBP eCLIP15.7■□□□□ 0.1
TRAPPC4-212ENST00000533058 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.7■□□□□ 0.1
TRAPPC4-212ENST00000533058 KCNH4Q9UQ05 1017 aa15.7■□□□□ 0.1
TRAPPC4-212ENST00000533058 CCL15-CCL14A0A0B4J2E2 113 aa15.69■□□□□ 0.1
TRAPPC4-212ENST00000533058 CTNND1O60716 968 aaKnown RBP15.69■□□□□ 0.1
TRAPPC4-212ENST00000533058 ATP5JP18859 108 aa15.69■□□□□ 0.1
TRAPPC4-212ENST00000533058 CYP7A1P22680 504 aa15.69■□□□□ 0.1
TRAPPC4-212ENST00000533058 NUCB1Q02818 461 aa15.69■□□□□ 0.1
TRAPPC4-212ENST00000533058 CCL15Q16663 113 aa15.69■□□□□ 0.1
TRAPPC4-212ENST00000533058 CENPQQ7L2Z9 268 aaPredicted RBP15.69■□□□□ 0.1
TRAPPC4-212ENST00000533058 SCYL3Q8IZE3 742 aa15.69■□□□□ 0.1
TRAPPC4-212ENST00000533058 ZNF296Q8WUU4 475 aaPredicted RBP15.69■□□□□ 0.1
TRAPPC4-212ENST00000533058 ABHD8Q96I13 439 aa15.69■□□□□ 0.1
TRAPPC4-212ENST00000533058 CASP8AP2Q9UKL3 1982 aa15.69■□□□□ 0.1
TRAPPC4-212ENST00000533058 CTU1Q7Z7A3 348 aaKnown RBP15.68■□□□□ 0.1
TRAPPC4-212ENST00000533058 METTL16Q86W50 562 aaKnown RBP15.68■□□□□ 0.1
TRAPPC4-212ENST00000533058 MAGEB6Q8N7X4 407 aa15.68■□□□□ 0.1
TRAPPC4-212ENST00000533058 DNAJC2Q99543 621 aaKnown RBP15.68■□□□□ 0.1
TRAPPC4-212ENST00000533058 MCOLN1Q9GZU1 580 aa15.68■□□□□ 0.1
TRAPPC4-212ENST00000533058 R3HDMLQ9H3Y0 253 aa15.68■□□□□ 0.1
TRAPPC4-212ENST00000533058 PI4KBQ9UBF8 816 aa15.68■□□□□ 0.1
TRAPPC4-212ENST00000533058 HERC5Q9UII4 1024 aaKnown RBP15.68■□□□□ 0.1
TRAPPC4-212ENST00000533058 NDUFB9Q9Y6M9 179 aa15.68■□□□□ 0.1
TRAPPC4-212ENST00000533058 MAST2Q6P0Q8 1798 aa15.67■□□□□ 0.1
TRAPPC4-212ENST00000533058 CXCL11O14625 94 aa15.67■□□□□ 0.1
TRAPPC4-212ENST00000533058 FKTNO75072 461 aa15.67■□□□□ 0.1
TRAPPC4-212ENST00000533058 DGKZQ13574 1117 aa15.67■□□□□ 0.1
TRAPPC4-212ENST00000533058 PKN2Q16513 984 aaKnown RBP15.67■□□□□ 0.1
TRAPPC4-212ENST00000533058 TSHZ3Q63HK5 1081 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms