RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 SMARCA5O60264 1052 aaPredicted RBP18.73■□□□□ 0.59
CPSF1-210ENST00000532935 IDH1O75874 414 aaKnown RBP18.73■□□□□ 0.59
CPSF1-210ENST00000532935 GJA5P36382 358 aa18.73■□□□□ 0.59
CPSF1-210ENST00000532935 TM4SF4P48230 202 aa18.73■□□□□ 0.59
CPSF1-210ENST00000532935 SREBF2Q12772 1141 aa18.73■□□□□ 0.59
CPSF1-210ENST00000532935 WRNIP1Q96S55 665 aa18.73■□□□□ 0.59
CPSF1-210ENST00000532935 ATRNL1Q5VV63 1379 aa18.72■□□□□ 0.59
CPSF1-210ENST00000532935 NPM3O75607 178 aaKnown RBP18.72■□□□□ 0.59
CPSF1-210ENST00000532935 TRPA1O75762 1119 aa18.72■□□□□ 0.59
CPSF1-210ENST00000532935 BAG3O95817 575 aa18.72■□□□□ 0.59
CPSF1-210ENST00000532935 SH3BP5LQ7L8J4 393 aa18.72■□□□□ 0.59
CPSF1-210ENST00000532935 ADGRA1Q86SQ6 560 aa18.72■□□□□ 0.59
CPSF1-210ENST00000532935 ZSCAN29Q8IWY8 852 aaPredicted RBP18.72■□□□□ 0.59
CPSF1-210ENST00000532935 TEX11Q8IYF3 940 aa18.72■□□□□ 0.59
CPSF1-210ENST00000532935 OPTNQ96CV9 577 aa18.72■□□□□ 0.59
CPSF1-210ENST00000532935 AATFQ9NY61 560 aaKnown RBP eCLIP18.72■□□□□ 0.59
CPSF1-210ENST00000532935 MYH1P12882 1939 aa18.71■□□□□ 0.59
CPSF1-210ENST00000532935 MANSC4A6NHS7 340 aaPredicted RBP18.71■□□□□ 0.59
CPSF1-210ENST00000532935 PLCG2P16885 1265 aa18.71■□□□□ 0.59
CPSF1-210ENST00000532935 CYP7A1P22680 504 aa18.71■□□□□ 0.59
CPSF1-210ENST00000532935 PPP4CP60510 307 aa18.71■□□□□ 0.59
CPSF1-210ENST00000532935 MAP3K12Q12852 859 aa18.71■□□□□ 0.59
CPSF1-210ENST00000532935 TTF1Q15361 905 aaPredicted RBP18.71■□□□□ 0.59
CPSF1-210ENST00000532935 SH3RF3Q8TEJ3 882 aaPredicted RBP18.71■□□□□ 0.59
CPSF1-210ENST00000532935 ZKSCAN4Q969J2 545 aaPredicted RBP18.71■□□□□ 0.59
CPSF1-210ENST00000532935 SNCAIPQ9Y6H5 919 aa18.71■□□□□ 0.59
CPSF1-210ENST00000532935 DDTLA6NHG4 134 aaPredicted RBP18.7■□□□□ 0.58
CPSF1-210ENST00000532935 ATP5JP18859 108 aa18.7■□□□□ 0.58
CPSF1-210ENST00000532935 MAGEB6Q8N7X4 407 aa18.7■□□□□ 0.58
CPSF1-210ENST00000532935 CNKSR2Q8WXI2 1034 aa18.7■□□□□ 0.58
CPSF1-210ENST00000532935 DNAJC2Q99543 621 aaKnown RBP18.7■□□□□ 0.58
CPSF1-210ENST00000532935 ZNF112Q9UJU3 913 aa18.7■□□□□ 0.58
CPSF1-210ENST00000532935 COL2A1P02458 1487 aaPredicted RBP18.7■□□□□ 0.58
CPSF1-210ENST00000532935 DOCK1Q14185 1865 aa18.69■□□□□ 0.58
CPSF1-210ENST00000532935 GOLIM4O00461 696 aa18.69■□□□□ 0.58
CPSF1-210ENST00000532935 INPP5BP32019 993 aa18.69■□□□□ 0.58
CPSF1-210ENST00000532935 INHBEP58166 350 aa18.69■□□□□ 0.58
CPSF1-210ENST00000532935 TMED8Q6PL24 325 aaPredicted RBP18.69■□□□□ 0.58
CPSF1-210ENST00000532935 TNS4Q8IZW8 715 aa18.69■□□□□ 0.58
CPSF1-210ENST00000532935 OSBPL5Q9H0X9 879 aaPredicted RBP18.69■□□□□ 0.58
CPSF1-210ENST00000532935 BOLA2Q9H3K6 86 aa18.69■□□□□ 0.58
CPSF1-210ENST00000532935 SIPA1L1O43166 1804 aa18.69■□□□□ 0.58
CPSF1-210ENST00000532935 ATAD5Q96QE3 1844 aa18.69■□□□□ 0.58
CPSF1-210ENST00000532935 SPDYE5A6NIY4 337 aa18.68■□□□□ 0.58
CPSF1-210ENST00000532935 OTUD5Q96G74 571 aa18.68■□□□□ 0.58
CPSF1-210ENST00000532935 DYNLL1P63167 89 aaKnown RBP18.67■□□□□ 0.58
CPSF1-210ENST00000532935 MAP3K10Q02779 954 aa18.67■□□□□ 0.58
CPSF1-210ENST00000532935 AAMPQ13685 434 aa18.67■□□□□ 0.58
CPSF1-210ENST00000532935 ERO1BQ86YB8 467 aa18.67■□□□□ 0.58
CPSF1-210ENST00000532935 IFNL1Q8IU54 200 aa18.67■□□□□ 0.58
CPSF1-210ENST00000532935 MIGA1Q8NAN2 632 aa18.67■□□□□ 0.58
CPSF1-210ENST00000532935 EDC3Q96F86 508 aaKnown RBP18.67■□□□□ 0.58
CPSF1-210ENST00000532935 HAUS7Q99871 368 aa18.67■□□□□ 0.58
CPSF1-210ENST00000532935 PAG1Q9NWQ8 432 aa18.67■□□□□ 0.58
CPSF1-210ENST00000532935 PHIPQ8WWQ0 1821 aa18.66■□□□□ 0.58
CPSF1-210ENST00000532935 PHF20L1A8MW92 1017 aa18.66■□□□□ 0.58
CPSF1-210ENST00000532935 SLURP2P0DP57 97 aa18.66■□□□□ 0.58
CPSF1-210ENST00000532935 PDE6AP16499 860 aa18.66■□□□□ 0.58
CPSF1-210ENST00000532935 NOL9Q5SY16 702 aaKnown RBP18.66■□□□□ 0.58
CPSF1-210ENST00000532935 TGFBRAP1Q8WUH2 860 aa18.66■□□□□ 0.58
CPSF1-210ENST00000532935 ECHDC1Q9NTX5 307 aa18.66■□□□□ 0.58
CPSF1-210ENST00000532935 SUPT16HQ9Y5B9 1047 aaKnown RBP18.66■□□□□ 0.58
CPSF1-210ENST00000532935 NAV1Q8NEY1 1877 aa18.65■□□□□ 0.58
CPSF1-210ENST00000532935 TESPA1A2RU30 521 aaPredicted RBP18.65■□□□□ 0.58
CPSF1-210ENST00000532935 IGF2BP3O00425 579 aaKnown RBP eCLIP18.65■□□□□ 0.58
CPSF1-210ENST00000532935 TBC1D8O95759 1140 aa18.65■□□□□ 0.58
CPSF1-210ENST00000532935 ALDH1A1P00352 501 aa18.65■□□□□ 0.58
CPSF1-210ENST00000532935 GTF2A2P52657 109 aa18.65■□□□□ 0.58
CPSF1-210ENST00000532935 PPIL2Q13356 520 aa18.65■□□□□ 0.58
CPSF1-210ENST00000532935 SLC9C2Q5TAH2 1124 aa18.65■□□□□ 0.58
CPSF1-210ENST00000532935 CERS3Q8IU89 383 aa18.65■□□□□ 0.58
CPSF1-210ENST00000532935 MAPKAPK5Q8IW41 473 aa18.65■□□□□ 0.58
CPSF1-210ENST00000532935 MS4A4AQ96JQ5 239 aa18.65■□□□□ 0.58
CPSF1-210ENST00000532935 FLT1P17948 1338 aa18.65■□□□□ 0.58
CPSF1-210ENST00000532935 PTPRFP10586 1907 aa18.64■□□□□ 0.58
CPSF1-210ENST00000532935 TBC1D12O60347 775 aa18.64■□□□□ 0.57
CPSF1-210ENST00000532935 PPATQ06203 517 aa18.64■□□□□ 0.57
CPSF1-210ENST00000532935 HDAC1Q13547 482 aaPredicted RBP18.64■□□□□ 0.57
CPSF1-210ENST00000532935 GPATCH3Q96I76 525 aa18.64■□□□□ 0.57
CPSF1-210ENST00000532935 PTPN18Q99952 460 aa18.64■□□□□ 0.57
CPSF1-210ENST00000532935 CFHR5Q9BXR6 569 aa18.64■□□□□ 0.57
CPSF1-210ENST00000532935 TCRBV5S4A2TA0A5A2 114 aa18.63■□□□□ 0.57
CPSF1-210ENST00000532935 IRF6O14896 467 aa18.63■□□□□ 0.57
CPSF1-210ENST00000532935 OTUD7BQ6GQQ9 843 aa18.63■□□□□ 0.57
CPSF1-210ENST00000532935 EXOC6Q8TAG9 804 aa18.63■□□□□ 0.57
CPSF1-210ENST00000532935 BRI3BPQ8WY22 251 aa18.63■□□□□ 0.57
CPSF1-210ENST00000532935 DHX36Q9H2U1 1008 aaKnown RBP18.63■□□□□ 0.57
CPSF1-210ENST00000532935 ZNF532Q9HCE3 1301 aa18.63■□□□□ 0.57
CPSF1-210ENST00000532935 DDX60LQ5H9U9 1706 aaKnown RBP18.63■□□□□ 0.57
CPSF1-210ENST00000532935 CCL15-CCL14A0A0B4J2E2 113 aa18.62■□□□□ 0.57
CPSF1-210ENST00000532935 MAGEB6P1A0A0J9YX57 407 aa18.62■□□□□ 0.57
CPSF1-210ENST00000532935 FAM196BA6NMK8 535 aa18.62■□□□□ 0.57
CPSF1-210ENST00000532935 CCL15Q16663 113 aa18.62■□□□□ 0.57
CPSF1-210ENST00000532935 IFFO2Q5TF58 517 aa18.62■□□□□ 0.57
CPSF1-210ENST00000532935 SCYL3Q8IZE3 742 aa18.62■□□□□ 0.57
CPSF1-210ENST00000532935 RIOK1Q9BRS2 568 aaKnown RBP18.62■□□□□ 0.57
CPSF1-210ENST00000532935 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.62■□□□□ 0.573e-11■■■■■ 33.7
CPSF1-210ENST00000532935 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.62■□□□□ 0.57
CPSF1-210ENST00000532935 PI4KBQ9UBF8 816 aa18.62■□□□□ 0.57
CPSF1-210ENST00000532935 CTNND1O60716 968 aaKnown RBP18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms