RNA–Protein interactions for RNA: ENST00000532912.1

TRIM53BP-201, Transcript of tripartite motif containing 53B, pseudogene, humanhuman

BASIC

Gene TRIM53BP, Length 1,720 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53BP-201ENST00000532912 SHC4Q6S5L8 630 aa9.62□□□□□ -0.87
TRIM53BP-201ENST00000532912 SYNE3Q6ZMZ3 975 aa9.62□□□□□ -0.87
TRIM53BP-201ENST00000532912 NBPF11Q86T75 865 aa9.62□□□□□ -0.87
TRIM53BP-201ENST00000532912 DRC7Q8IY82 874 aa9.62□□□□□ -0.87
TRIM53BP-201ENST00000532912 MPHOSPH8Q99549 860 aa9.62□□□□□ -0.87
TRIM53BP-201ENST00000532912 MTA3Q9BTC8 594 aa9.62□□□□□ -0.87
TRIM53BP-201ENST00000532912 MYL10Q9BUA6 226 aa9.62□□□□□ -0.87
TRIM53BP-201ENST00000532912 NAPBQ9H115 298 aa9.62□□□□□ -0.87
TRIM53BP-201ENST00000532912 TUBE1Q9UJT0 475 aa9.62□□□□□ -0.87
TRIM53BP-201ENST00000532912 COL1A1P02452 1464 aaPredicted RBP9.62□□□□□ -0.87
TRIM53BP-201ENST00000532912 SCN7AQ01118 1682 aa9.61□□□□□ -0.87
TRIM53BP-201ENST00000532912 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.61□□□□□ -0.87
TRIM53BP-201ENST00000532912 GOLGA8AA7E2F4 631 aa9.61□□□□□ -0.87
TRIM53BP-201ENST00000532912 CTIFO43310 598 aaKnown RBP9.61□□□□□ -0.87
TRIM53BP-201ENST00000532912 IFNAR1P17181 557 aa9.61□□□□□ -0.87
TRIM53BP-201ENST00000532912 GNAT2P19087 354 aa9.61□□□□□ -0.87
TRIM53BP-201ENST00000532912 NLRP12P59046 1061 aa9.61□□□□□ -0.87
TRIM53BP-201ENST00000532912 CCZ1BP86790 482 aa9.61□□□□□ -0.87
TRIM53BP-201ENST00000532912 CCZ1P86791 482 aaPredicted RBP9.61□□□□□ -0.87
TRIM53BP-201ENST00000532912 CHRNDQ07001 517 aa9.61□□□□□ -0.87
TRIM53BP-201ENST00000532912 ARID5BQ14865 1188 aa9.61□□□□□ -0.87
TRIM53BP-201ENST00000532912 TSC1Q92574 1164 aa9.61□□□□□ -0.87
TRIM53BP-201ENST00000532912 SDF4Q9BRK5 362 aa9.61□□□□□ -0.87
TRIM53BP-201ENST00000532912 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.61□□□□□ -0.87
TRIM53BP-201ENST00000532912 OSBPL5Q9H0X9 879 aaPredicted RBP9.61□□□□□ -0.87
TRIM53BP-201ENST00000532912 HSD3B7Q9H2F3 369 aa9.61□□□□□ -0.87
TRIM53BP-201ENST00000532912 CNNM2Q9H8M5 875 aa9.61□□□□□ -0.87
TRIM53BP-201ENST00000532912 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.61□□□□□ -0.87
TRIM53BP-201ENST00000532912 KCND1Q9NSA2 647 aa9.61□□□□□ -0.87
TRIM53BP-201ENST00000532912 BECN2A8MW95 431 aa9.6□□□□□ -0.87
TRIM53BP-201ENST00000532912 RIOK3O14730 519 aaKnown RBP9.6□□□□□ -0.87
TRIM53BP-201ENST00000532912 IFIT3O14879 490 aaKnown RBP9.6□□□□□ -0.87
TRIM53BP-201ENST00000532912 NEMFO60524 1076 aa9.6□□□□□ -0.87
TRIM53BP-201ENST00000532912 SLC3A2P08195 630 aaKnown RBP9.6□□□□□ -0.87
TRIM53BP-201ENST00000532912 MARCKSP29966 332 aaPredicted RBP9.6□□□□□ -0.87
TRIM53BP-201ENST00000532912 GUCY1A2P33402 732 aa9.6□□□□□ -0.87
TRIM53BP-201ENST00000532912 IARSP41252 1262 aaKnown RBP9.6□□□□□ -0.87
TRIM53BP-201ENST00000532912 RCAN1P53805 252 aa9.6□□□□□ -0.87
TRIM53BP-201ENST00000532912 DDB1Q16531 1140 aa9.6□□□□□ -0.87
TRIM53BP-201ENST00000532912 RESP18Q5W5W9 173 aa9.6□□□□□ -0.87
TRIM53BP-201ENST00000532912 CPLX2Q6PUV4 134 aaKnown RBP9.6□□□□□ -0.87
TRIM53BP-201ENST00000532912 MTERF4Q7Z6M4 381 aaKnown RBP9.6□□□□□ -0.87
TRIM53BP-201ENST00000532912 ADGRA1Q86SQ6 560 aa9.6□□□□□ -0.87
TRIM53BP-201ENST00000532912 KRT23Q9C075 422 aa9.6□□□□□ -0.87
TRIM53BP-201ENST00000532912 NAT10Q9H0A0 1025 aaKnown RBP9.6□□□□□ -0.87
TRIM53BP-201ENST00000532912 SLC12A7Q9Y666 1083 aa9.6□□□□□ -0.87
TRIM53BP-201ENST00000532912 SPATA31A5Q5VU36 1347 aa9.59□□□□□ -0.87
TRIM53BP-201ENST00000532912 SPATA31A7Q8IWB4 1347 aa9.59□□□□□ -0.87
TRIM53BP-201ENST00000532912 IGHMBP2P38935 993 aaKnown RBP9.59□□□□□ -0.87
TRIM53BP-201ENST00000532912 ACSBG1Q96GR2 724 aa9.59□□□□□ -0.87
TRIM53BP-201ENST00000532912 ANAPC4Q9UJX5 808 aa9.59□□□□□ -0.87
TRIM53BP-201ENST00000532912 NIP7Q9Y221 180 aaKnown RBP eCLIP9.59□□□□□ -0.87
TRIM53BP-201ENST00000532912 SLC4A4Q9Y6R1 1079 aa9.59□□□□□ -0.87
TRIM53BP-201ENST00000532912 FAM177BA6PVY3 158 aa9.59□□□□□ -0.87
TRIM53BP-201ENST00000532912 CUTAO60888 179 aa9.59□□□□□ -0.87
TRIM53BP-201ENST00000532912 MMP1P03956 469 aa9.59□□□□□ -0.87
TRIM53BP-201ENST00000532912 SYKP43405 635 aa9.59□□□□□ -0.87
TRIM53BP-201ENST00000532912 TOB1P50616 345 aaPredicted RBP9.59□□□□□ -0.87
TRIM53BP-201ENST00000532912 SSRP1Q08945 709 aaKnown RBP9.59□□□□□ -0.87
TRIM53BP-201ENST00000532912 SF3B3Q15393 1217 aaKnown RBP9.59□□□□□ -0.87
TRIM53BP-201ENST00000532912 SEC23AQ15436 765 aa9.59□□□□□ -0.87
TRIM53BP-201ENST00000532912 NFXL1Q6ZNB6 911 aa9.59□□□□□ -0.87
TRIM53BP-201ENST00000532912 MFSD6Q6ZSS7 791 aa9.59□□□□□ -0.87
TRIM53BP-201ENST00000532912 C3orf67Q6ZVT6 689 aa9.59□□□□□ -0.87
TRIM53BP-201ENST00000532912 ELOA2Q8IYF1 753 aaPredicted RBP9.59□□□□□ -0.87
TRIM53BP-201ENST00000532912 RIOK1Q9BRS2 568 aaKnown RBP9.59□□□□□ -0.87
TRIM53BP-201ENST00000532912 SLC26A6Q9BXS9 759 aa9.59□□□□□ -0.87
TRIM53BP-201ENST00000532912 BCL2L12Q9HB09 334 aa9.59□□□□□ -0.87
TRIM53BP-201ENST00000532912 DUOX1Q9NRD9 1551 aa9.59□□□□□ -0.87
TRIM53BP-201ENST00000532912 DLEC1Q9Y238 1755 aa9.58□□□□□ -0.88
TRIM53BP-201ENST00000532912 TAF1P21675 1872 aa9.58□□□□□ -0.88
TRIM53BP-201ENST00000532912 CCDC69A6NI79 296 aa9.58□□□□□ -0.88
TRIM53BP-201ENST00000532912 USP27XA6NNY8 438 aa9.58□□□□□ -0.88
TRIM53BP-201ENST00000532912 IKBKBO14920 756 aa9.58□□□□□ -0.88
TRIM53BP-201ENST00000532912 KCNA4P22459 653 aa9.58□□□□□ -0.88
TRIM53BP-201ENST00000532912 PPARAQ07869 468 aa9.58□□□□□ -0.88
TRIM53BP-201ENST00000532912 CLEC4GQ6UXB4 293 aa9.58□□□□□ -0.88
TRIM53BP-201ENST00000532912 BARGINQ6ZT62 677 aa9.58□□□□□ -0.88
TRIM53BP-201ENST00000532912 NYAP1Q6ZVC0 841 aa9.58□□□□□ -0.88
TRIM53BP-201ENST00000532912 METTL16Q86W50 562 aaKnown RBP9.58□□□□□ -0.88
TRIM53BP-201ENST00000532912 NOSTRINQ8IVI9 506 aa9.58□□□□□ -0.88
TRIM53BP-201ENST00000532912 STK11IPQ8N1F8 1099 aa9.58□□□□□ -0.88
TRIM53BP-201ENST00000532912 JMYQ8N9B5 988 aa9.58□□□□□ -0.88
TRIM53BP-201ENST00000532912 ZNF384Q8TF68 577 aa9.58□□□□□ -0.88
TRIM53BP-201ENST00000532912 SHISA4Q96DD7 197 aa9.58□□□□□ -0.88
TRIM53BP-201ENST00000532912 CLIC6Q96NY7 704 aa9.58□□□□□ -0.88
TRIM53BP-201ENST00000532912 NACAP1Q9BZK3 213 aa9.58□□□□□ -0.88
TRIM53BP-201ENST00000532912 IMPACTQ9P2X3 320 aa9.58□□□□□ -0.88
TRIM53BP-201ENST00000532912 WTIPA6NIX2 430 aaPredicted RBP9.57□□□□□ -0.88
TRIM53BP-201ENST00000532912 BTBD18B2RXH4 712 aa9.57□□□□□ -0.88
TRIM53BP-201ENST00000532912 SMIM22K7EJ46 135 aa9.57□□□□□ -0.88
TRIM53BP-201ENST00000532912 FGRP09769 529 aa9.57□□□□□ -0.88
TRIM53BP-201ENST00000532912 TDO2P48775 406 aa9.57□□□□□ -0.88
TRIM53BP-201ENST00000532912 MDM2Q00987 491 aaPredicted RBP9.57□□□□□ -0.88
TRIM53BP-201ENST00000532912 WTAPQ15007 396 aa9.57□□□□□ -0.88
TRIM53BP-201ENST00000532912 RTN1Q16799 776 aa9.57□□□□□ -0.88
TRIM53BP-201ENST00000532912 FOXP4Q8IVH2 680 aaPredicted RBP9.57□□□□□ -0.88
TRIM53BP-201ENST00000532912 CRACR2BQ8N4Y2 399 aaPredicted RBP9.57□□□□□ -0.88
TRIM53BP-201ENST00000532912 MIGA1Q8NAN2 632 aa9.57□□□□□ -0.88
TRIM53BP-201ENST00000532912 ANKRD7Q92527 254 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms