RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 CYP2E1P05181 493 aaPredicted RBP21.08■□□□□ 0.97
PHRF1-204ENST00000532550 INPP5BP32019 993 aa21.08■□□□□ 0.97
PHRF1-204ENST00000532550 NAA16Q6N069 864 aaPredicted RBP21.08■□□□□ 0.97
PHRF1-204ENST00000532550 RHPN1Q8TCX5 695 aa21.08■□□□□ 0.97
PHRF1-204ENST00000532550 R3HDMLQ9H3Y0 253 aa21.08■□□□□ 0.97
PHRF1-204ENST00000532550 ZNF112Q9UJU3 913 aa21.08■□□□□ 0.97
PHRF1-204ENST00000532550 CCL15-CCL14A0A0B4J2E2 113 aa21.07■□□□□ 0.96
PHRF1-204ENST00000532550 APBB1O00213 710 aa21.07■□□□□ 0.96
PHRF1-204ENST00000532550 IGSF3O75054 1194 aa21.07■□□□□ 0.96
PHRF1-204ENST00000532550 FKTNO75072 461 aa21.07■□□□□ 0.96
PHRF1-204ENST00000532550 BAG3O95817 575 aa21.07■□□□□ 0.96
PHRF1-204ENST00000532550 ZAP70P43403 619 aa21.07■□□□□ 0.96
PHRF1-204ENST00000532550 RHBDL3P58872 404 aa21.07■□□□□ 0.96
PHRF1-204ENST00000532550 CCL15Q16663 113 aa21.07■□□□□ 0.96
PHRF1-204ENST00000532550 C20orf194Q5TEA3 1177 aa21.07■□□□□ 0.96
PHRF1-204ENST00000532550 SIRT2Q8IXJ6 389 aa21.07■□□□□ 0.96
PHRF1-204ENST00000532550 PTPN18Q99952 460 aa21.07■□□□□ 0.96
PHRF1-204ENST00000532550 IL1RAPL2Q9NP60 686 aa21.07■□□□□ 0.96
PHRF1-204ENST00000532550 NPM3O75607 178 aaKnown RBP21.06■□□□□ 0.96
PHRF1-204ENST00000532550 PPATQ06203 517 aa21.06■□□□□ 0.96
PHRF1-204ENST00000532550 CLASRPQ8N2M8 674 aaKnown RBP21.06■□□□□ 0.96
PHRF1-204ENST00000532550 KIF1BPQ96EK5 621 aa21.06■□□□□ 0.96
PHRF1-204ENST00000532550 DDX4Q9NQI0 724 aaKnown RBP21.06■□□□□ 0.96
PHRF1-204ENST00000532550 DDTLA6NHG4 134 aaPredicted RBP21.05■□□□□ 0.96
PHRF1-204ENST00000532550 IRF6O14896 467 aa21.05■□□□□ 0.96
PHRF1-204ENST00000532550 RAB11FIP3O75154 756 aa21.05■□□□□ 0.96
PHRF1-204ENST00000532550 CETPP11597 493 aa21.05■□□□□ 0.96
PHRF1-204ENST00000532550 PPIL2Q13356 520 aa21.05■□□□□ 0.96
PHRF1-204ENST00000532550 SNAPC2Q13487 334 aa21.05■□□□□ 0.96
PHRF1-204ENST00000532550 SH3BP5LQ7L8J4 393 aa21.05■□□□□ 0.96
PHRF1-204ENST00000532550 BRI3BPQ8WY22 251 aa21.05■□□□□ 0.96
PHRF1-204ENST00000532550 CRHR2Q13324 411 aa21.04■□□□□ 0.96
PHRF1-204ENST00000532550 PKN2Q16513 984 aaKnown RBP21.04■□□□□ 0.96
PHRF1-204ENST00000532550 TEX11Q8IYF3 940 aa21.04■□□□□ 0.96
PHRF1-204ENST00000532550 BCL11AQ9H165 835 aa21.04■□□□□ 0.96
PHRF1-204ENST00000532550 LAMB1P07942 1786 aa21.03■□□□□ 0.96
PHRF1-204ENST00000532550 PLCG2P16885 1265 aa21.03■□□□□ 0.96
PHRF1-204ENST00000532550 MAP3K10Q02779 954 aa21.03■□□□□ 0.96
PHRF1-204ENST00000532550 PIH1D3Q9NQM4 214 aaKnown RBP21.03■□□□□ 0.96
PHRF1-204ENST00000532550 AATFQ9NY61 560 aaKnown RBP eCLIP21.03■□□□□ 0.96
PHRF1-204ENST00000532550 RFX7Q2KHR2 1363 aa21.02■□□□□ 0.96
PHRF1-204ENST00000532550 IDH1O75874 414 aaKnown RBP21.02■□□□□ 0.96
PHRF1-204ENST00000532550 IFIT2P09913 472 aaKnown RBP21.02■□□□□ 0.96
PHRF1-204ENST00000532550 PPP4CP60510 307 aa21.02■□□□□ 0.96
PHRF1-204ENST00000532550 NOL9Q5SY16 702 aaKnown RBP21.02■□□□□ 0.96
PHRF1-204ENST00000532550 SH3RF3Q8TEJ3 882 aaPredicted RBP21.02■□□□□ 0.96
PHRF1-204ENST00000532550 ZFYVE28Q9HCC9 887 aa21.02■□□□□ 0.96
PHRF1-204ENST00000532550 PHF20L1A8MW92 1017 aa21.01■□□□□ 0.95
PHRF1-204ENST00000532550 TAF1CQ15572 869 aaPredicted RBP21.01■□□□□ 0.95
PHRF1-204ENST00000532550 FAM43AQ8N2R8 423 aa21.01■□□□□ 0.95
PHRF1-204ENST00000532550 PICK1Q9NRD5 415 aa21.01■□□□□ 0.95
PHRF1-204ENST00000532550 TBC1D12O60347 775 aa21■□□□□ 0.95
PHRF1-204ENST00000532550 CYP7A1P22680 504 aa21■□□□□ 0.95
PHRF1-204ENST00000532550 MAP3K12Q12852 859 aa21■□□□□ 0.95
PHRF1-204ENST00000532550 SCYL3Q8IZE3 742 aa21■□□□□ 0.95
PHRF1-204ENST00000532550 OSBPL5Q9H0X9 879 aaPredicted RBP21■□□□□ 0.95
PHRF1-204ENST00000532550 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21■□□□□ 0.95
PHRF1-204ENST00000532550 NDUFB9Q9Y6M9 179 aa21■□□□□ 0.95
PHRF1-204ENST00000532550 MYO5AQ9Y4I1 1855 aaKnown RBP21■□□□□ 0.95
PHRF1-204ENST00000532550 ATRNL1Q5VV63 1379 aa20.99■□□□□ 0.95
PHRF1-204ENST00000532550 CTNND1O60716 968 aaKnown RBP20.99■□□□□ 0.95
PHRF1-204ENST00000532550 ADGRA1Q86SQ6 560 aa20.99■□□□□ 0.95
PHRF1-204ENST00000532550 ERO1AQ96HE7 468 aa20.99■□□□□ 0.95
PHRF1-204ENST00000532550 DOCK2Q92608 1830 aa20.99■□□□□ 0.95
PHRF1-204ENST00000532550 BTBD19C9JJ37 291 aa20.98■□□□□ 0.95
PHRF1-204ENST00000532550 SP3Q02447 781 aa20.98■□□□□ 0.95
PHRF1-204ENST00000532550 TTF1Q15361 905 aaPredicted RBP20.98■□□□□ 0.95
PHRF1-204ENST00000532550 MAGEB6Q8N7X4 407 aa20.98■□□□□ 0.95
PHRF1-204ENST00000532550 TGFBRAP1Q8WUH2 860 aa20.98■□□□□ 0.95
PHRF1-204ENST00000532550 YTHDC1Q96MU7 727 aaKnown RBP20.98■□□□□ 0.95
PHRF1-204ENST00000532550 DHX36Q9H2U1 1008 aaKnown RBP20.98■□□□□ 0.95
PHRF1-204ENST00000532550 ANTXR1Q9H6X2 564 aa20.98■□□□□ 0.95
PHRF1-204ENST00000532550 ZCCHC17Q9NP64 241 aaKnown RBP20.98■□□□□ 0.95
PHRF1-204ENST00000532550 KCNH4Q9UQ05 1017 aa20.98■□□□□ 0.95
PHRF1-204ENST00000532550 ZHX2Q9Y6X8 837 aa20.98■□□□□ 0.95
PHRF1-204ENST00000532550 CXCL11O14625 94 aa20.97■□□□□ 0.95
PHRF1-204ENST00000532550 SLURP2P0DP57 97 aa20.97■□□□□ 0.95
PHRF1-204ENST00000532550 TMED8Q6PL24 325 aaPredicted RBP20.97■□□□□ 0.95
PHRF1-204ENST00000532550 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.97■□□□□ 0.95
PHRF1-204ENST00000532550 PI4KBQ9UBF8 816 aa20.97■□□□□ 0.95
PHRF1-204ENST00000532550 PTPRAP18433 802 aa20.96■□□□□ 0.95
PHRF1-204ENST00000532550 DYNLL1P63167 89 aaKnown RBP20.96■□□□□ 0.95
PHRF1-204ENST00000532550 FBXO46Q6PJ61 603 aaPredicted RBP20.96■□□□□ 0.95
PHRF1-204ENST00000532550 CERS3Q8IU89 383 aa20.96■□□□□ 0.95
PHRF1-204ENST00000532550 MAPKAPK5Q8IW41 473 aa20.96■□□□□ 0.95
PHRF1-204ENST00000532550 LRRCC1Q9C099 1032 aa20.96■□□□□ 0.95
PHRF1-204ENST00000532550 TRIM17Q9Y577 477 aa20.96■□□□□ 0.95
PHRF1-204ENST00000532550 ARHGEF6Q15052 776 aa20.95■□□□□ 0.94
PHRF1-204ENST00000532550 ANKRD23Q86SG2 305 aa20.95■□□□□ 0.94
PHRF1-204ENST00000532550 MIGA1Q8NAN2 632 aa20.95■□□□□ 0.94
PHRF1-204ENST00000532550 CD99L2Q8TCZ2 262 aa20.95■□□□□ 0.94
PHRF1-204ENST00000532550 HERC5Q9UII4 1024 aaKnown RBP20.95■□□□□ 0.94
PHRF1-204ENST00000532550 HPS5Q9UPZ3 1129 aa20.95■□□□□ 0.94
PHRF1-204ENST00000532550 MAST2Q6P0Q8 1798 aa20.95■□□□□ 0.94
PHRF1-204ENST00000532550 COL2A1P02458 1487 aaPredicted RBP20.94■□□□□ 0.94
PHRF1-204ENST00000532550 FAM196BA6NMK8 535 aa20.94■□□□□ 0.94
PHRF1-204ENST00000532550 TLR2O60603 784 aa20.94■□□□□ 0.94
PHRF1-204ENST00000532550 FOXP4Q8IVH2 680 aaPredicted RBP20.94■□□□□ 0.94
PHRF1-204ENST00000532550 DNAJC2Q99543 621 aaKnown RBP20.94■□□□□ 0.94
PHRF1-204ENST00000532550 AFG3L2Q9Y4W6 797 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 360.7 ms