RNA–Protein interactions for RNA: ENST00000532259.1

SRPRA-206, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2 BASIC

Gene SRPRA, Length 2,453 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-206ENST00000532259 TMEM87BQ96K49 555 aa17.76■□□□□ 0.43
SRPRA-206ENST00000532259 USP28Q96RU2 1077 aa17.76■□□□□ 0.43
SRPRA-206ENST00000532259 ZSCAN16Q9H4T2 348 aaPredicted RBP17.76■□□□□ 0.43
SRPRA-206ENST00000532259 POLLQ9UGP5 575 aa17.76■□□□□ 0.43
SRPRA-206ENST00000532259 SLC12A7Q9Y666 1083 aa17.76■□□□□ 0.43
SRPRA-206ENST00000532259 CCDC69A6NI79 296 aa17.76■□□□□ 0.43
SRPRA-206ENST00000532259 GOLGA8AA7E2F4 631 aa17.76■□□□□ 0.43
SRPRA-206ENST00000532259 RANBP6O60518 1105 aaKnown RBP17.76■□□□□ 0.43
SRPRA-206ENST00000532259 POTEAQ6S8J7 498 aa17.76■□□□□ 0.43
SRPRA-206ENST00000532259 ANP32BQ92688 251 aaKnown RBP17.76■□□□□ 0.43
SRPRA-206ENST00000532259 LEMD3Q9Y2U8 911 aa17.76■□□□□ 0.43
SRPRA-206ENST00000532259 DZIP1Q86YF9 867 aaKnown RBP17.75■□□□□ 0.43
SRPRA-206ENST00000532259 TDRD7Q8NHU6 1098 aaKnown RBP17.75■□□□□ 0.43
SRPRA-206ENST00000532259 NUP133Q8WUM0 1156 aa17.75■□□□□ 0.43
SRPRA-206ENST00000532259 AKT1S1Q96B36 256 aa17.75■□□□□ 0.43
SRPRA-206ENST00000532259 RBM17Q96I25 401 aaKnown RBP17.75■□□□□ 0.43
SRPRA-206ENST00000532259 KRT23Q9C075 422 aa17.75■□□□□ 0.43
SRPRA-206ENST00000532259 DACT1Q9NYF0 836 aa17.75■□□□□ 0.43
SRPRA-206ENST00000532259 CNNM2Q9H8M5 875 aa17.75■□□□□ 0.43
SRPRA-206ENST00000532259 TIAM2Q8IVF5 1701 aa17.74■□□□□ 0.43
SRPRA-206ENST00000532259 NTRK3Q16288 839 aa17.74■□□□□ 0.43
SRPRA-206ENST00000532259 SGMS1Q86VZ5 419 aa17.74■□□□□ 0.43
SRPRA-206ENST00000532259 CKAP2LQ8IYA6 745 aa17.74■□□□□ 0.43
SRPRA-206ENST00000532259 DCP1AQ9NPI6 582 aaPredicted RBP17.74■□□□□ 0.43
SRPRA-206ENST00000532259 KIF28PB7ZC32 967 aa17.74■□□□□ 0.43
SRPRA-206ENST00000532259 WTAPQ15007 396 aa17.74■□□□□ 0.43
SRPRA-206ENST00000532259 MYH2Q9UKX2 1941 aa17.74■□□□□ 0.43
SRPRA-206ENST00000532259 ELP1O95163 1332 aa17.73■□□□□ 0.43
SRPRA-206ENST00000532259 NR1I2O75469 434 aa17.73■□□□□ 0.43
SRPRA-206ENST00000532259 FBXO18Q8NFZ0 1043 aa17.73■□□□□ 0.43
SRPRA-206ENST00000532259 CFAP45Q9UL16 551 aa17.73■□□□□ 0.43
SRPRA-206ENST00000532259 PDS5AQ29RF7 1337 aaKnown RBP17.73■□□□□ 0.43
SRPRA-206ENST00000532259 RXRBP28702 533 aa17.73■□□□□ 0.43
SRPRA-206ENST00000532259 LIFRP42702 1097 aa17.73■□□□□ 0.43
SRPRA-206ENST00000532259 CHMP4CQ96CF2 233 aa17.73■□□□□ 0.43
SRPRA-206ENST00000532259 TRIM44Q96DX7 344 aaPredicted RBP17.73■□□□□ 0.43
SRPRA-206ENST00000532259 UBAC1Q9BSL1 405 aa17.73■□□□□ 0.43
SRPRA-206ENST00000532259 ALG1Q9BT22 464 aa17.73■□□□□ 0.43
SRPRA-206ENST00000532259 BRIP1Q9BX63 1249 aa17.73■□□□□ 0.43
SRPRA-206ENST00000532259 SLC26A6Q9BXS9 759 aa17.73■□□□□ 0.43
SRPRA-206ENST00000532259 CD209Q9NNX6 404 aa17.73■□□□□ 0.43
SRPRA-206ENST00000532259 GGA1Q9UJY5 639 aa17.73■□□□□ 0.43
SRPRA-206ENST00000532259 ERICH2A1L162 156 aa17.72■□□□□ 0.43
SRPRA-206ENST00000532259 PLSCR1O15162 318 aa17.72■□□□□ 0.43
SRPRA-206ENST00000532259 NMT2O60551 498 aa17.72■□□□□ 0.43
SRPRA-206ENST00000532259 LDHBP07195 334 aaKnown RBP17.72■□□□□ 0.43
SRPRA-206ENST00000532259 GUCY1A2P33402 732 aa17.72■□□□□ 0.43
SRPRA-206ENST00000532259 TBC1D16Q8TBP0 767 aa17.72■□□□□ 0.43
SRPRA-206ENST00000532259 C6orf229H3BNL8 230 aa17.72■□□□□ 0.43
SRPRA-206ENST00000532259 RIMBP2O15034 1052 aa17.72■□□□□ 0.43
SRPRA-206ENST00000532259 USP17L8P0C7I0 530 aa17.72■□□□□ 0.43
SRPRA-206ENST00000532259 ZNF804AQ7Z570 1209 aa17.72■□□□□ 0.43
SRPRA-206ENST00000532259 ANAPC4Q9UJX5 808 aa17.72■□□□□ 0.43
SRPRA-206ENST00000532259 TNKSO95271 1327 aa17.71■□□□□ 0.43
SRPRA-206ENST00000532259 MMP10P09238 476 aa17.71■□□□□ 0.43
SRPRA-206ENST00000532259 HOXA10P31260 410 aaPredicted RBP17.71■□□□□ 0.43
SRPRA-206ENST00000532259 SART3Q15020 963 aaKnown RBP17.71■□□□□ 0.43
SRPRA-206ENST00000532259 FAM47AQ5JRC9 791 aa17.71■□□□□ 0.43
SRPRA-206ENST00000532259 SYNE3Q6ZMZ3 975 aa17.71■□□□□ 0.43
SRPRA-206ENST00000532259 SH3RF3Q8TEJ3 882 aaPredicted RBP17.71■□□□□ 0.43
SRPRA-206ENST00000532259 RNF41Q9H4P4 317 aaPredicted RBP17.71■□□□□ 0.43
SRPRA-206ENST00000532259 RRAGDQ9NQL2 400 aaPredicted RBP17.71■□□□□ 0.43
SRPRA-206ENST00000532259 IARSP41252 1262 aaKnown RBP17.71■□□□□ 0.42
SRPRA-206ENST00000532259 ME1P48163 572 aa17.71■□□□□ 0.42
SRPRA-206ENST00000532259 NUP62CLQ9H1M0 184 aa17.71■□□□□ 0.42
SRPRA-206ENST00000532259 KLRG2A4D1S0 409 aaPredicted RBP17.7■□□□□ 0.42
SRPRA-206ENST00000532259 BBOX1O75936 387 aa17.7■□□□□ 0.42
SRPRA-206ENST00000532259 SEC23AQ15436 765 aa17.7■□□□□ 0.42
SRPRA-206ENST00000532259 ENAHQ8N8S7 591 aaPredicted RBP17.7■□□□□ 0.42
SRPRA-206ENST00000532259 CRNKL1Q9BZJ0 848 aaKnown RBP17.7■□□□□ 0.42
SRPRA-206ENST00000532259 CLIC4Q9Y696 253 aa17.7■□□□□ 0.42
SRPRA-206ENST00000532259 CCDC173Q0VFZ6 552 aa17.7■□□□□ 0.42
SRPRA-206ENST00000532259 CPLX2Q6PUV4 134 aaKnown RBP17.7■□□□□ 0.42
SRPRA-206ENST00000532259 WDR66Q8TBY9 1149 aa17.7■□□□□ 0.42
SRPRA-206ENST00000532259 ESR2Q92731 530 aa17.7■□□□□ 0.42
SRPRA-206ENST00000532259 MCM9Q9NXL9 1143 aa17.7■□□□□ 0.42
SRPRA-206ENST00000532259 UTRNP46939 3433 aa17.69■□□□□ 0.42
SRPRA-206ENST00000532259 ANKRD31Q8N7Z5 1873 aa17.69■□□□□ 0.42
SRPRA-206ENST00000532259 hCG_1642624A0A1W2PR95 340 aa17.69■□□□□ 0.42
SRPRA-206ENST00000532259 PLCB2Q00722 1185 aa17.69■□□□□ 0.42
SRPRA-206ENST00000532259 ZNF654Q8IZM8 581 aa17.69■□□□□ 0.42
SRPRA-206ENST00000532259 TNMDQ9H2S6 317 aa17.69■□□□□ 0.42
SRPRA-206ENST00000532259 PPEF1O14829 653 aaPredicted RBP17.69■□□□□ 0.42
SRPRA-206ENST00000532259 ATP2B4P23634 1241 aa17.69■□□□□ 0.42
SRPRA-206ENST00000532259 RTN1Q16799 776 aa17.69■□□□□ 0.42
SRPRA-206ENST00000532259 KRT40Q6A162 431 aa17.69■□□□□ 0.42
SRPRA-206ENST00000532259 NLGN1Q8N2Q7 840 aa17.69■□□□□ 0.42
SRPRA-206ENST00000532259 MPNDQ8N594 471 aa17.69■□□□□ 0.42
SRPRA-206ENST00000532259 DYNLL2Q96FJ2 89 aa17.69■□□□□ 0.42
SRPRA-206ENST00000532259 ZNF396Q96N95 335 aaPredicted RBP17.69■□□□□ 0.42
SRPRA-206ENST00000532259 CRAMP1Q96RY5 1269 aa17.69■□□□□ 0.42
SRPRA-206ENST00000532259 CCDC88AQ3V6T2 1871 aa17.68■□□□□ 0.42
SRPRA-206ENST00000532259 CDKL5O76039 1030 aa17.68■□□□□ 0.42
SRPRA-206ENST00000532259 SRGNP10124 158 aa17.68■□□□□ 0.42
SRPRA-206ENST00000532259 KIF23Q02241 960 aaPredicted RBP17.68■□□□□ 0.42
SRPRA-206ENST00000532259 GNL2Q13823 731 aaKnown RBP17.68■□□□□ 0.42
SRPRA-206ENST00000532259 FBXW7Q969H0 707 aa17.68■□□□□ 0.42
SRPRA-206ENST00000532259 GOLPH3LQ9H4A5 285 aa17.68■□□□□ 0.42
SRPRA-206ENST00000532259 DUOX1Q9NRD9 1551 aa17.68■□□□□ 0.42
SRPRA-206ENST00000532259 MYH15Q9Y2K3 1946 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms