RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 LDHDQ86WU2 507 aa7.15□□□□□ -1.26
HMGB1P42-201ENST00000532126 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.15□□□□□ -1.26
HMGB1P42-201ENST00000532126 PANK1Q8TE04 598 aa7.15□□□□□ -1.26
HMGB1P42-201ENST00000532126 ZSWIM6Q9HCJ5 1215 aa7.15□□□□□ -1.26
HMGB1P42-201ENST00000532126 ADARB2Q9NS39 739 aaKnown RBP7.15□□□□□ -1.26
HMGB1P42-201ENST00000532126 CNOT7Q9UIV1 285 aaKnown RBP7.15□□□□□ -1.26
HMGB1P42-201ENST00000532126 CCDC88AQ3V6T2 1871 aa7.15□□□□□ -1.27
HMGB1P42-201ENST00000532126 FAM196BA6NMK8 535 aa7.14□□□□□ -1.27
HMGB1P42-201ENST00000532126 TRIM6-TRIM34B2RNG4 842 aa7.14□□□□□ -1.27
HMGB1P42-201ENST00000532126 C3orf80F5H4A9 247 aa7.14□□□□□ -1.27
HMGB1P42-201ENST00000532126 ZBTB7BO15156 539 aaPredicted RBP7.14□□□□□ -1.27
HMGB1P42-201ENST00000532126 FDX1P10109 184 aa7.14□□□□□ -1.27
HMGB1P42-201ENST00000532126 HSPA6P17066 643 aa7.14□□□□□ -1.27
HMGB1P42-201ENST00000532126 MTX1Q13505 466 aa7.14□□□□□ -1.27
HMGB1P42-201ENST00000532126 UBE4AQ14139 1066 aa7.14□□□□□ -1.27
HMGB1P42-201ENST00000532126 PUM3Q15397 648 aaKnown RBP7.14□□□□□ -1.27
HMGB1P42-201ENST00000532126 STRIP1Q5VSL9 837 aa7.14□□□□□ -1.27
HMGB1P42-201ENST00000532126 VGLL2Q8N8G2 317 aa7.14□□□□□ -1.27
HMGB1P42-201ENST00000532126 AGBL3Q8NEM8 1001 aa7.14□□□□□ -1.27
HMGB1P42-201ENST00000532126 DPF2Q92785 391 aa7.14□□□□□ -1.27
HMGB1P42-201ENST00000532126 CLP1Q92989 425 aaKnown RBP7.14□□□□□ -1.27
HMGB1P42-201ENST00000532126 SIL1Q9H173 461 aa7.14□□□□□ -1.27
HMGB1P42-201ENST00000532126 CD209Q9NNX6 404 aa7.14□□□□□ -1.27
HMGB1P42-201ENST00000532126 HMX1Q9NP08 348 aaPredicted RBP7.14□□□□□ -1.27
HMGB1P42-201ENST00000532126 COPRSQ9NQ92 184 aa7.14□□□□□ -1.27
HMGB1P42-201ENST00000532126 CEP126Q9P2H0 1117 aa7.14□□□□□ -1.27
HMGB1P42-201ENST00000532126 LHX6Q9UPM6 363 aa7.14□□□□□ -1.27
HMGB1P42-201ENST00000532126 IRS2Q9Y4H2 1338 aa7.14□□□□□ -1.27
HMGB1P42-201ENST00000532126 PNMA6EA0A0J9YXQ4 647 aa7.13□□□□□ -1.27
HMGB1P42-201ENST00000532126 SHTN1A0MZ66 631 aa7.13□□□□□ -1.27
HMGB1P42-201ENST00000532126 HOXA2O43364 376 aa7.13□□□□□ -1.27
HMGB1P42-201ENST00000532126 LZTS3O60299 673 aaPredicted RBP7.13□□□□□ -1.27
HMGB1P42-201ENST00000532126 RECKO95980 971 aa7.13□□□□□ -1.27
HMGB1P42-201ENST00000532126 IFIT1P09914 478 aaKnown RBP7.13□□□□□ -1.27
HMGB1P42-201ENST00000532126 IL1R1P14778 569 aa7.13□□□□□ -1.27
HMGB1P42-201ENST00000532126 HIBADHP31937 336 aaKnown RBP7.13□□□□□ -1.27
HMGB1P42-201ENST00000532126 IL15P40933 162 aaPredicted RBP7.13□□□□□ -1.27
HMGB1P42-201ENST00000532126 GYG1P46976 350 aa7.13□□□□□ -1.27
HMGB1P42-201ENST00000532126 GTF2IP78347 998 aa7.13□□□□□ -1.27
HMGB1P42-201ENST00000532126 MVPQ14764 893 aaKnown RBP7.13□□□□□ -1.27
HMGB1P42-201ENST00000532126 CAVIN4Q5BKX8 364 aa7.13□□□□□ -1.27
HMGB1P42-201ENST00000532126 DACT2Q5SW24 774 aa7.13□□□□□ -1.27
HMGB1P42-201ENST00000532126 MAP1SQ66K74 1059 aaPredicted RBP7.13□□□□□ -1.27
HMGB1P42-201ENST00000532126 TTLL5Q6EMB2 1281 aa7.13□□□□□ -1.27
HMGB1P42-201ENST00000532126 GPR153Q6NV75 609 aa7.13□□□□□ -1.27
HMGB1P42-201ENST00000532126 NOL8Q76FK4 1167 aaKnown RBP7.13□□□□□ -1.27
HMGB1P42-201ENST00000532126 ATG9AQ7Z3C6 839 aa7.13□□□□□ -1.27
HMGB1P42-201ENST00000532126 VPS37DQ86XT2 251 aa7.13□□□□□ -1.27
HMGB1P42-201ENST00000532126 DDX19BQ9UMR2 479 aa7.13□□□□□ -1.27
HMGB1P42-201ENST00000532126 PA2G4Q9UQ80 394 aaKnown RBP7.13□□□□□ -1.27
HMGB1P42-201ENST00000532126 TMA7Q9Y2S6 64 aaKnown RBP7.13□□□□□ -1.27
HMGB1P42-201ENST00000532126 SPEF2Q9C093 1822 aa7.13□□□□□ -1.27
HMGB1P42-201ENST00000532126 MYO3BQ8WXR4 1341 aa7.12□□□□□ -1.27
HMGB1P42-201ENST00000532126 FRAT2O75474 233 aaPredicted RBP7.12□□□□□ -1.27
HMGB1P42-201ENST00000532126 SASH1O94885 1247 aa7.12□□□□□ -1.27
HMGB1P42-201ENST00000532126 SLC5A1P13866 664 aa7.12□□□□□ -1.27
HMGB1P42-201ENST00000532126 FGFR2P21802 821 aa7.12□□□□□ -1.27
HMGB1P42-201ENST00000532126 GCGRP47871 477 aa7.12□□□□□ -1.27
HMGB1P42-201ENST00000532126 APLP1P51693 650 aa7.12□□□□□ -1.27
HMGB1P42-201ENST00000532126 HIRAP54198 1017 aaPredicted RBP7.12□□□□□ -1.27
HMGB1P42-201ENST00000532126 ATP8B2P98198 1209 aa7.12□□□□□ -1.27
HMGB1P42-201ENST00000532126 CTDSPL2Q05D32 466 aa7.12□□□□□ -1.27
HMGB1P42-201ENST00000532126 PDE3AQ14432 1141 aa7.12□□□□□ -1.27
HMGB1P42-201ENST00000532126 COL19A1Q14993 1142 aa7.12□□□□□ -1.27
HMGB1P42-201ENST00000532126 ATP2B3Q16720 1220 aa7.12□□□□□ -1.27
HMGB1P42-201ENST00000532126 TBC1D10BQ4KMP7 808 aaPredicted RBP7.12□□□□□ -1.27
HMGB1P42-201ENST00000532126 DPH6Q7L8W6 267 aa7.12□□□□□ -1.27
HMGB1P42-201ENST00000532126 SAMD7Q7Z3H4 446 aa7.12□□□□□ -1.27
HMGB1P42-201ENST00000532126 CNTROBQ8N137 903 aa7.12□□□□□ -1.27
HMGB1P42-201ENST00000532126 OGFOD1Q8N543 542 aa7.12□□□□□ -1.27
HMGB1P42-201ENST00000532126 TRPM4Q8TD43 1214 aa7.12□□□□□ -1.27
HMGB1P42-201ENST00000532126 LPIN2Q92539 896 aa7.12□□□□□ -1.27
HMGB1P42-201ENST00000532126 FAM84BQ96KN1 310 aaPredicted RBP7.12□□□□□ -1.27
HMGB1P42-201ENST00000532126 MXD3Q9BW11 206 aa7.12□□□□□ -1.27
HMGB1P42-201ENST00000532126 CHMP4BQ9H444 224 aaKnown RBP7.12□□□□□ -1.27
HMGB1P42-201ENST00000532126 SCN4AP35499 1836 aa7.12□□□□□ -1.27
HMGB1P42-201ENST00000532126 ZNF609O15014 1411 aa7.11□□□□□ -1.27
HMGB1P42-201ENST00000532126 SMAPO00193 183 aa7.11□□□□□ -1.27
HMGB1P42-201ENST00000532126 EGFRP00533 1210 aa7.11□□□□□ -1.27
HMGB1P42-201ENST00000532126 HOXB3P14651 431 aaPredicted RBP7.11□□□□□ -1.27
HMGB1P42-201ENST00000532126 SERPINB4P48594 390 aa7.11□□□□□ -1.27
HMGB1P42-201ENST00000532126 BCAMP50895 628 aa7.11□□□□□ -1.27
HMGB1P42-201ENST00000532126 ZNF280AP59817 542 aaPredicted RBP7.11□□□□□ -1.27
HMGB1P42-201ENST00000532126 G3BP1Q13283 466 aaKnown RBP eCLIP7.11□□□□□ -1.27
HMGB1P42-201ENST00000532126 TSNAXIP1Q2TAA8 658 aa7.11□□□□□ -1.27
HMGB1P42-201ENST00000532126 KIF4BQ2VIQ3 1234 aa7.11□□□□□ -1.27
HMGB1P42-201ENST00000532126 C20orf194Q5TEA3 1177 aa7.11□□□□□ -1.27
HMGB1P42-201ENST00000532126 FBXO33Q7Z6M2 555 aa7.11□□□□□ -1.27
HMGB1P42-201ENST00000532126 CERS3Q8IU89 383 aa7.11□□□□□ -1.27
HMGB1P42-201ENST00000532126 KIAA0825Q8IV33 1275 aa7.11□□□□□ -1.27
HMGB1P42-201ENST00000532126 PLEKHM2Q8IWE5 1019 aa7.11□□□□□ -1.27
HMGB1P42-201ENST00000532126 ZSCAN29Q8IWY8 852 aaPredicted RBP7.11□□□□□ -1.27
HMGB1P42-201ENST00000532126 TDRD7Q8NHU6 1098 aaKnown RBP7.11□□□□□ -1.27
HMGB1P42-201ENST00000532126 FAM200AQ8TCP9 573 aa7.11□□□□□ -1.27
HMGB1P42-201ENST00000532126 SSH3Q8TE77 659 aa7.11□□□□□ -1.27
HMGB1P42-201ENST00000532126 TSC1Q92574 1164 aa7.11□□□□□ -1.27
HMGB1P42-201ENST00000532126 GMLQ99445 158 aa7.11□□□□□ -1.27
HMGB1P42-201ENST00000532126 MYOZ2Q9NPC6 264 aa7.11□□□□□ -1.27
HMGB1P42-201ENST00000532126 EGFL7Q9UHF1 273 aa7.11□□□□□ -1.27
HMGB1P42-201ENST00000532126 JAG2Q9Y219 1238 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms