RNA–Protein interactions for RNA: ENST00000531900.1

GPATCH4-216, Transcript of G-patch domain containing 4, humanhuman

TSL 2

Gene GPATCH4, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-216ENST00000531900 MKRN3Q13064 507 aaKnown RBP13.16□□□□□ -0.3
GPATCH4-216ENST00000531900 SPRYD7Q5W111 196 aa13.16□□□□□ -0.3
GPATCH4-216ENST00000531900 ANKRD13AQ8IZ07 590 aa13.16□□□□□ -0.3
GPATCH4-216ENST00000531900 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.16□□□□□ -0.3
GPATCH4-216ENST00000531900 HAUS7Q99871 368 aa13.16□□□□□ -0.3
GPATCH4-216ENST00000531900 ECHDC1Q9NTX5 307 aa13.16□□□□□ -0.3
GPATCH4-216ENST00000531900 ZNF112Q9UJU3 913 aa13.16□□□□□ -0.3
GPATCH4-216ENST00000531900 OTOFQ9HC10 1997 aa13.16□□□□□ -0.3
GPATCH4-216ENST00000531900 MANSC4A6NHS7 340 aaPredicted RBP13.15□□□□□ -0.3
GPATCH4-216ENST00000531900 SMARCA5O60264 1052 aaPredicted RBP13.15□□□□□ -0.3
GPATCH4-216ENST00000531900 ZBTB48P10074 688 aaPredicted RBP13.15□□□□□ -0.3
GPATCH4-216ENST00000531900 DCAF15Q66K64 600 aa13.15□□□□□ -0.3
GPATCH4-216ENST00000531900 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.15□□□□□ -0.3
GPATCH4-216ENST00000531900 ADGRA1Q86SQ6 560 aa13.15□□□□□ -0.3
GPATCH4-216ENST00000531900 SMC5Q8IY18 1101 aa13.15□□□□□ -0.3
GPATCH4-216ENST00000531900 EXOC6Q8TAG9 804 aa13.15□□□□□ -0.3
GPATCH4-216ENST00000531900 DDX4Q9NQI0 724 aaKnown RBP13.15□□□□□ -0.3
GPATCH4-216ENST00000531900 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.15□□□□□ -0.3
GPATCH4-216ENST00000531900 TTC41PQ6P2S7 1318 aa13.14□□□□□ -0.31
GPATCH4-216ENST00000531900 SALL3Q9BXA9 1300 aa13.14□□□□□ -0.31
GPATCH4-216ENST00000531900 MYH7P12883 1935 aa13.14□□□□□ -0.31
GPATCH4-216ENST00000531900 TBC1D12O60347 775 aa13.14□□□□□ -0.31
GPATCH4-216ENST00000531900 TBC1D8O95759 1140 aa13.14□□□□□ -0.31
GPATCH4-216ENST00000531900 ALDH1A1P00352 501 aa13.14□□□□□ -0.31
GPATCH4-216ENST00000531900 MAP3K9P80192 1104 aa13.14□□□□□ -0.31
GPATCH4-216ENST00000531900 SH3BP5LQ7L8J4 393 aa13.14□□□□□ -0.31
GPATCH4-216ENST00000531900 CTU1Q7Z7A3 348 aaKnown RBP13.14□□□□□ -0.31
GPATCH4-216ENST00000531900 ZFPM1Q8IX07 1006 aa13.14□□□□□ -0.31
GPATCH4-216ENST00000531900 FZD1Q9UP38 647 aa13.14□□□□□ -0.31
GPATCH4-216ENST00000531900 NDUFB9Q9Y6M9 179 aa13.14□□□□□ -0.31
GPATCH4-216ENST00000531900 TCRBV5S4A2TA0A5A2 114 aa13.13□□□□□ -0.31
GPATCH4-216ENST00000531900 IDH1O75874 414 aaKnown RBP13.13□□□□□ -0.31
GPATCH4-216ENST00000531900 CYP7A1P22680 504 aa13.13□□□□□ -0.31
GPATCH4-216ENST00000531900 TCP10Q12799 353 aa13.13□□□□□ -0.31
GPATCH4-216ENST00000531900 MAGEB6Q8N7X4 407 aa13.13□□□□□ -0.31
GPATCH4-216ENST00000531900 NOL10Q9BSC4 688 aaKnown RBP13.13□□□□□ -0.31
GPATCH4-216ENST00000531900 ZNF341Q9BYN7 854 aa13.13□□□□□ -0.31
GPATCH4-216ENST00000531900 BOLA2Q9H3K6 86 aa13.13□□□□□ -0.31
GPATCH4-216ENST00000531900 RWDD1Q9H446 243 aaPredicted RBP13.13□□□□□ -0.31
GPATCH4-216ENST00000531900 PAG1Q9NWQ8 432 aa13.13□□□□□ -0.31
GPATCH4-216ENST00000531900 AATFQ9NY61 560 aaKnown RBP eCLIP13.13□□□□□ -0.31
GPATCH4-216ENST00000531900 DDTLA6NHG4 134 aaPredicted RBP13.12□□□□□ -0.31
GPATCH4-216ENST00000531900 GOLIM4O00461 696 aa13.12□□□□□ -0.31
GPATCH4-216ENST00000531900 PDE6AP16499 860 aa13.12□□□□□ -0.31
GPATCH4-216ENST00000531900 PKN2Q16513 984 aaKnown RBP13.12□□□□□ -0.31
GPATCH4-216ENST00000531900 NOM1Q5C9Z4 860 aaKnown RBP13.12□□□□□ -0.31
GPATCH4-216ENST00000531900 SLC9C2Q5TAH2 1124 aa13.12□□□□□ -0.31
GPATCH4-216ENST00000531900 OTUD7BQ6GQQ9 843 aa13.12□□□□□ -0.31
GPATCH4-216ENST00000531900 METTL16Q86W50 562 aaKnown RBP13.12□□□□□ -0.31
GPATCH4-216ENST00000531900 SH3RF3Q8TEJ3 882 aaPredicted RBP13.12□□□□□ -0.31
GPATCH4-216ENST00000531900 GPATCH3Q96I76 525 aa13.12□□□□□ -0.31
GPATCH4-216ENST00000531900 WNK4Q96J92 1243 aa13.12□□□□□ -0.31
GPATCH4-216ENST00000531900 CLMNQ96JQ2 1002 aa13.12□□□□□ -0.31
GPATCH4-216ENST00000531900 RIOK1Q9BRS2 568 aaKnown RBP13.12□□□□□ -0.31
GPATCH4-216ENST00000531900 CFHR5Q9BXR6 569 aa13.12□□□□□ -0.31
GPATCH4-216ENST00000531900 OSBPL5Q9H0X9 879 aaPredicted RBP13.12□□□□□ -0.31
GPATCH4-216ENST00000531900 DHX36Q9H2U1 1008 aaKnown RBP13.12□□□□□ -0.31
GPATCH4-216ENST00000531900 TESPA1A2RU30 521 aaPredicted RBP13.11□□□□□ -0.31
GPATCH4-216ENST00000531900 PHF20L1A8MW92 1017 aa13.11□□□□□ -0.31
GPATCH4-216ENST00000531900 GPR25O00155 361 aa13.11□□□□□ -0.31
GPATCH4-216ENST00000531900 VGLL4Q14135 290 aa13.11□□□□□ -0.31
GPATCH4-216ENST00000531900 UBE3CQ15386 1083 aa13.11□□□□□ -0.31
GPATCH4-216ENST00000531900 NOL9Q5SY16 702 aaKnown RBP13.11□□□□□ -0.31
GPATCH4-216ENST00000531900 TEX11Q8IYF3 940 aa13.11□□□□□ -0.31
GPATCH4-216ENST00000531900 PI4K2BQ8TCG2 481 aa13.11□□□□□ -0.31
GPATCH4-216ENST00000531900 ZNF296Q8WUU4 475 aaPredicted RBP13.11□□□□□ -0.31
GPATCH4-216ENST00000531900 DNAJC2Q99543 621 aaKnown RBP13.11□□□□□ -0.31
GPATCH4-216ENST00000531900 STAP2Q9UGK3 403 aa13.11□□□□□ -0.31
GPATCH4-216ENST00000531900 MYH1P12882 1939 aa13.1□□□□□ -0.31
GPATCH4-216ENST00000531900 SPDYE5A6NIY4 337 aa13.1□□□□□ -0.31
GPATCH4-216ENST00000531900 IGHDP01880 384 aa13.1□□□□□ -0.31
GPATCH4-216ENST00000531900 ADD2P35612 726 aa13.1□□□□□ -0.31
GPATCH4-216ENST00000531900 RGS19P49795 217 aa13.1□□□□□ -0.31
GPATCH4-216ENST00000531900 MLLT1Q03111 559 aaPredicted RBP13.1□□□□□ -0.31
GPATCH4-216ENST00000531900 MIGA2Q7L4E1 593 aa13.1□□□□□ -0.31
GPATCH4-216ENST00000531900 TICAM2Q86XR7 235 aa13.1□□□□□ -0.31
GPATCH4-216ENST00000531900 IFNL1Q8IU54 200 aa13.1□□□□□ -0.31
GPATCH4-216ENST00000531900 EDC3Q96F86 508 aaKnown RBP13.1□□□□□ -0.31
GPATCH4-216ENST00000531900 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.1□□□□□ -0.31
GPATCH4-216ENST00000531900 CSADQ9Y600 493 aa13.1□□□□□ -0.31
GPATCH4-216ENST00000531900 SNCAIPQ9Y6H5 919 aa13.1□□□□□ -0.31
GPATCH4-216ENST00000531900 SIPA1L1O43166 1804 aa13.09□□□□□ -0.31
GPATCH4-216ENST00000531900 ERC2O15083 957 aa13.09□□□□□ -0.31
GPATCH4-216ENST00000531900 FKTNO75072 461 aa13.09□□□□□ -0.31
GPATCH4-216ENST00000531900 GLRX3O76003 335 aaKnown RBP13.09□□□□□ -0.31
GPATCH4-216ENST00000531900 MX1P20591 662 aa13.09□□□□□ -0.31
GPATCH4-216ENST00000531900 GJA5P36382 358 aa13.09□□□□□ -0.31
GPATCH4-216ENST00000531900 PPATQ06203 517 aa13.09□□□□□ -0.31
GPATCH4-216ENST00000531900 PICALMQ13492 652 aa13.09□□□□□ -0.31
GPATCH4-216ENST00000531900 ANKRD45Q5TZF3 282 aa13.09□□□□□ -0.31
GPATCH4-216ENST00000531900 ZSCAN25Q6NSZ9 544 aa13.09□□□□□ -0.31
GPATCH4-216ENST00000531900 ERO1BQ86YB8 467 aa13.09□□□□□ -0.31
GPATCH4-216ENST00000531900 FOXP4Q8IVH2 680 aaPredicted RBP13.09□□□□□ -0.31
GPATCH4-216ENST00000531900 KBTBD3Q8NAB2 608 aa13.09□□□□□ -0.31
GPATCH4-216ENST00000531900 OPTNQ96CV9 577 aa13.09□□□□□ -0.31
GPATCH4-216ENST00000531900 MS4A4AQ96JQ5 239 aa13.09□□□□□ -0.31
GPATCH4-216ENST00000531900 WRNIP1Q96S55 665 aa13.09□□□□□ -0.31
GPATCH4-216ENST00000531900 ELP3Q9H9T3 547 aa13.09□□□□□ -0.31
GPATCH4-216ENST00000531900 PI4KBQ9UBF8 816 aa13.09□□□□□ -0.31
GPATCH4-216ENST00000531900 HERC5Q9UII4 1024 aaKnown RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms