RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 FCGRTP55899 365 aa9.39□□□□□ -0.91
PTPRK-220ENST00000531466 DTHD1Q6ZMT9 781 aa9.39□□□□□ -0.91
PTPRK-220ENST00000531466 HRASLS5Q96KN8 279 aa9.39□□□□□ -0.91
PTPRK-220ENST00000531466 PLAGL2Q9UPG8 496 aa9.39□□□□□ -0.91
PTPRK-220ENST00000531466 FARP2O94887 1054 aaPredicted RBP9.38□□□□□ -0.91
PTPRK-220ENST00000531466 IGHA2P01877 340 aa9.38□□□□□ -0.91
PTPRK-220ENST00000531466 CEACAM5P06731 702 aa9.38□□□□□ -0.91
PTPRK-220ENST00000531466 ITIH2P19823 946 aa9.38□□□□□ -0.91
PTPRK-220ENST00000531466 OXCT1P55809 520 aa9.38□□□□□ -0.91
PTPRK-220ENST00000531466 TOP6BLQ8N6T0 577 aa9.38□□□□□ -0.91
PTPRK-220ENST00000531466 CITED4Q96RK1 184 aa9.38□□□□□ -0.91
PTPRK-220ENST00000531466 PCOLCE2Q9UKZ9 415 aa9.38□□□□□ -0.91
PTPRK-220ENST00000531466 HNRNPUQ00839 825 aaKnown RBP eCLIP9.37□□□□□ -0.91
PTPRK-220ENST00000531466 PPP2R3AQ06190 1150 aa9.37□□□□□ -0.91
PTPRK-220ENST00000531466 PDZD3Q86UT5 571 aa9.37□□□□□ -0.91
PTPRK-220ENST00000531466 STK35Q8TDR2 534 aa9.37□□□□□ -0.91
PTPRK-220ENST00000531466 ISL2Q96A47 359 aa9.37□□□□□ -0.91
PTPRK-220ENST00000531466 CSRNP1Q96S65 589 aa9.37□□□□□ -0.91
PTPRK-220ENST00000531466 SSU72Q9NP77 194 aaKnown RBP9.37□□□□□ -0.91
PTPRK-220ENST00000531466 TMEM39AQ9NV64 488 aa9.37□□□□□ -0.91
PTPRK-220ENST00000531466 USTQ9Y2C2 406 aa9.37□□□□□ -0.91
PTPRK-220ENST00000531466 MKNK2Q9HBH9 465 aa9.36□□□□□ -0.91
PTPRK-220ENST00000531466 TMEM265A0A087WTH1 108 aa9.35□□□□□ -0.91
PTPRK-220ENST00000531466 ANGEL2Q5VTE6 544 aaKnown RBP9.35□□□□□ -0.91
PTPRK-220ENST00000531466 PI16Q6UXB8 463 aa9.35□□□□□ -0.91
PTPRK-220ENST00000531466 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.35□□□□□ -0.91
PTPRK-220ENST00000531466 SULF2Q8IWU5 870 aa9.35□□□□□ -0.91
PTPRK-220ENST00000531466 DBX1A6NMT0 343 aa9.34□□□□□ -0.91
PTPRK-220ENST00000531466 PKN1Q16512 942 aa9.34□□□□□ -0.91
PTPRK-220ENST00000531466 KSR1Q8IVT5 923 aa9.34□□□□□ -0.91
PTPRK-220ENST00000531466 TMEM40Q8WWA1 233 aa9.34□□□□□ -0.91
PTPRK-220ENST00000531466 PRDM7Q9NQW5 492 aa9.34□□□□□ -0.91
PTPRK-220ENST00000531466 ZC3H12AQ5D1E8 599 aaKnown RBP9.33□□□□□ -0.92
PTPRK-220ENST00000531466 LCE4AQ5TA78 99 aa9.33□□□□□ -0.92
PTPRK-220ENST00000531466 MAP1SQ66K74 1059 aaPredicted RBP9.32□□□□□ -0.92
PTPRK-220ENST00000531466 HEXIM2Q96MH2 286 aaKnown RBP9.32□□□□□ -0.92
PTPRK-220ENST00000531466 ARNTP27540 789 aa9.31□□□□□ -0.92
PTPRK-220ENST00000531466 SLC23A3Q6PIS1 610 aa9.31□□□□□ -0.92
PTPRK-220ENST00000531466 RNF214Q8ND24 703 aa9.31□□□□□ -0.92
PTPRK-220ENST00000531466 GPBAR1Q8TDU6 330 aa9.31□□□□□ -0.92
PTPRK-220ENST00000531466 DMRTB1Q96MA1 342 aa9.31□□□□□ -0.92
PTPRK-220ENST00000531466 KRTAP4-9Q9BYQ8 210 aa9.31□□□□□ -0.92
PTPRK-220ENST00000531466 TNKS2Q9H2K2 1166 aa9.31□□□□□ -0.92
PTPRK-220ENST00000531466 NLRP2Q9NX02 1062 aa9.31□□□□□ -0.92
PTPRK-220ENST00000531466 PPP4R2Q9NY27 417 aa9.31□□□□□ -0.92
PTPRK-220ENST00000531466 AKAP2Q9Y2D5 859 aa9.31□□□□□ -0.92
PTPRK-220ENST00000531466 ERVK-24P63145 666 aa9.3□□□□□ -0.92
PTPRK-220ENST00000531466 BCO2Q9BYV7 579 aa9.3□□□□□ -0.92
PTPRK-220ENST00000531466 IKZF1Q13422 519 aa9.29□□□□□ -0.92
PTPRK-220ENST00000531466 MPRIPQ6WCQ1 1025 aa9.29□□□□□ -0.92
PTPRK-220ENST00000531466 SPOCD1Q6ZMY3 1216 aa9.29□□□□□ -0.92
PTPRK-220ENST00000531466 TXNDC2Q86VQ3 553 aa9.29□□□□□ -0.92
PTPRK-220ENST00000531466 FLAD1Q8NFF5 587 aa9.29□□□□□ -0.92
PTPRK-220ENST00000531466 ALKBH8Q96BT7 664 aaKnown RBP9.29□□□□□ -0.92
PTPRK-220ENST00000531466 ACSBG1Q96GR2 724 aa9.29□□□□□ -0.92
PTPRK-220ENST00000531466 SLC38A3Q99624 504 aa9.29□□□□□ -0.92
PTPRK-220ENST00000531466 CBX8Q9HC52 389 aa9.29□□□□□ -0.92
PTPRK-220ENST00000531466 CSADQ9Y600 493 aa9.29□□□□□ -0.92
PTPRK-220ENST00000531466 LRRC10BA6NIK2 292 aa9.28□□□□□ -0.92
PTPRK-220ENST00000531466 XRCC5P13010 732 aaKnown RBP9.28□□□□□ -0.92
PTPRK-220ENST00000531466 NME2P22392 152 aa9.28□□□□□ -0.92
PTPRK-220ENST00000531466 PPM1JQ5JR12 505 aa9.28□□□□□ -0.92
PTPRK-220ENST00000531466 FAM214BQ7L5A3 538 aa9.28□□□□□ -0.92
PTPRK-220ENST00000531466 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.28□□□□□ -0.92
PTPRK-220ENST00000531466 SNX11Q9Y5W9 270 aa9.28□□□□□ -0.92
PTPRK-220ENST00000531466 ZP2Q05996 745 aa9.27□□□□□ -0.93
PTPRK-220ENST00000531466 MESP2Q0VG99 397 aa9.27□□□□□ -0.93
PTPRK-220ENST00000531466 FBLN7Q53RD9 439 aa9.27□□□□□ -0.93
PTPRK-220ENST00000531466 UBE3DQ7Z6J8 389 aa9.27□□□□□ -0.93
PTPRK-220ENST00000531466 ZSWIM9Q86XI8 627 aa9.27□□□□□ -0.93
PTPRK-220ENST00000531466 RBCK1Q9BYM8 510 aa9.27□□□□□ -0.93
PTPRK-220ENST00000531466 GTF2IRD1Q9UHL9 959 aa9.27□□□□□ -0.93
PTPRK-220ENST00000531466 GTF3C3Q9Y5Q9 886 aa9.27□□□□□ -0.93
PTPRK-220ENST00000531466 ZNF252P-AS1Q0IIN9 211 aa9.26□□□□□ -0.93
PTPRK-220ENST00000531466 NXPE4Q6UWF7 544 aa9.26□□□□□ -0.93
PTPRK-220ENST00000531466 SPACA3Q8IXA5 215 aa9.26□□□□□ -0.93
PTPRK-220ENST00000531466 EMILIN2Q9BXX0 1053 aa9.26□□□□□ -0.93
PTPRK-220ENST00000531466 PRDM10Q9NQV6 1147 aa9.26□□□□□ -0.93
PTPRK-220ENST00000531466 PICK1Q9NRD5 415 aa9.26□□□□□ -0.93
PTPRK-220ENST00000531466 KCNMB1Q16558 191 aa9.25□□□□□ -0.93
PTPRK-220ENST00000531466 MLANAQ16655 118 aa9.25□□□□□ -0.93
PTPRK-220ENST00000531466 ASB11Q8WXH4 323 aa9.25□□□□□ -0.93
PTPRK-220ENST00000531466 FAM84AQ96KN4 292 aa9.25□□□□□ -0.93
PTPRK-220ENST00000531466 ZNF503-AS2A6NEH8 195 aa9.24□□□□□ -0.93
PTPRK-220ENST00000531466 DCDC2CA8MYV0 355 aa9.24□□□□□ -0.93
PTPRK-220ENST00000531466 IGF2BP3O00425 579 aaKnown RBP eCLIP9.24□□□□□ -0.93
PTPRK-220ENST00000531466 NTF4P34130 210 aa9.24□□□□□ -0.93
PTPRK-220ENST00000531466 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.24□□□□□ -0.93
PTPRK-220ENST00000531466 TMC7Q7Z402 723 aa9.24□□□□□ -0.93
PTPRK-220ENST00000531466 GRIN3AQ8TCU5 1115 aa9.24□□□□□ -0.93
PTPRK-220ENST00000531466 NKPD1Q17RQ9 610 aa9.23□□□□□ -0.93
PTPRK-220ENST00000531466 C12orf40Q86WS4 652 aa9.23□□□□□ -0.93
PTPRK-220ENST00000531466 CTNND2Q9UQB3 1225 aa9.23□□□□□ -0.93
PTPRK-220ENST00000531466 FYB2Q5VWT5 728 aa9.22□□□□□ -0.93
PTPRK-220ENST00000531466 TPTE2Q6XPS3 522 aa9.22□□□□□ -0.93
PTPRK-220ENST00000531466 LIN37Q96GY3 246 aaPredicted RBP9.22□□□□□ -0.93
PTPRK-220ENST00000531466 CACNA2D2Q9NY47 1150 aa9.22□□□□□ -0.93
PTPRK-220ENST00000531466 PNMA6FA0A0J9YX94 578 aa9.21□□□□□ -0.94
PTPRK-220ENST00000531466 GNAT3A8MTJ3 354 aa9.21□□□□□ -0.94
PTPRK-220ENST00000531466 C3orf58Q8NDZ4 430 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms