RNA–Protein interactions for RNA: ENST00000531270.5

LRRK1-207, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,015 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-207ENST00000531270 CD19P15391 556 aa16.33■□□□□ 0.21
LRRK1-207ENST00000531270 AK2P54819 239 aa16.33■□□□□ 0.21
LRRK1-207ENST00000531270 PPP2R3AQ06190 1150 aa16.33■□□□□ 0.21
LRRK1-207ENST00000531270 RILPL1Q5EBL4 403 aa16.33■□□□□ 0.21
LRRK1-207ENST00000531270 HDXQ7Z353 690 aa16.33■□□□□ 0.21
LRRK1-207ENST00000531270 GABPB2Q8TAK5 448 aaPredicted RBP16.33■□□□□ 0.21
LRRK1-207ENST00000531270 NOX5Q96PH1 765 aa16.33■□□□□ 0.21
LRRK1-207ENST00000531270 RBM28Q9NW13 759 aaKnown RBP16.33■□□□□ 0.21
LRRK1-207ENST00000531270 TBC1D32Q96NH3 1257 aa16.33■□□□□ 0.2
LRRK1-207ENST00000531270 RAD51AP2Q09MP3 1159 aa16.33■□□□□ 0.2
LRRK1-207ENST00000531270 C8orf74Q6P047 294 aa16.33■□□□□ 0.2
LRRK1-207ENST00000531270 C4orf50Q6ZRC1 276 aa16.33■□□□□ 0.2
LRRK1-207ENST00000531270 UBL4BQ8N7F7 174 aa16.33■□□□□ 0.2
LRRK1-207ENST00000531270 CABLES1Q8TDN4 633 aa16.33■□□□□ 0.2
LRRK1-207ENST00000531270 RIOK1Q9BRS2 568 aaKnown RBP16.33■□□□□ 0.2
LRRK1-207ENST00000531270 USH1GQ495M9 461 aa16.33■□□□□ 0.2
LRRK1-207ENST00000531270 CREB3L3Q68CJ9 461 aa16.32■□□□□ 0.2
LRRK1-207ENST00000531270 CCDC62Q6P9F0 684 aa16.32■□□□□ 0.2
LRRK1-207ENST00000531270 TTC6Q86TZ1 520 aa16.32■□□□□ 0.2
LRRK1-207ENST00000531270 DDX27Q96GQ7 796 aaKnown RBP16.32■□□□□ 0.2
LRRK1-207ENST00000531270 CTTNBP2NLQ9P2B4 639 aa16.32■□□□□ 0.2
LRRK1-207ENST00000531270 MYO1AQ9UBC5 1043 aa16.32■□□□□ 0.2
LRRK1-207ENST00000531270 SWAP70Q9UH65 585 aa16.32■□□□□ 0.2
LRRK1-207ENST00000531270 UFL1O94874 794 aa16.32■□□□□ 0.2
LRRK1-207ENST00000531270 GBP1P32455 592 aa16.32■□□□□ 0.2
LRRK1-207ENST00000531270 CWF19L2Q2TBE0 894 aaKnown RBP16.32■□□□□ 0.2
LRRK1-207ENST00000531270 CNGA4Q8IV77 575 aa16.32■□□□□ 0.2
LRRK1-207ENST00000531270 KLHL7Q8IXQ5 586 aa16.32■□□□□ 0.2
LRRK1-207ENST00000531270 CPXCR1Q8N123 301 aa16.32■□□□□ 0.2
LRRK1-207ENST00000531270 ANKRD2Q9GZV1 360 aa16.32■□□□□ 0.2
LRRK1-207ENST00000531270 PLEKHA4Q9H4M7 779 aa16.32■□□□□ 0.2
LRRK1-207ENST00000531270 ACTN4O43707 911 aaKnown RBP16.32■□□□□ 0.2
LRRK1-207ENST00000531270 BUB1BO60566 1050 aaPredicted RBP16.32■□□□□ 0.2
LRRK1-207ENST00000531270 PRIM1P49642 420 aaKnown RBP16.32■□□□□ 0.2
LRRK1-207ENST00000531270 KSR2Q6VAB6 950 aa16.32■□□□□ 0.2
LRRK1-207ENST00000531270 RNF169Q8NCN4 708 aa16.32■□□□□ 0.2
LRRK1-207ENST00000531270 PSMB7Q99436 277 aa16.32■□□□□ 0.2
LRRK1-207ENST00000531270 SORBS3O60504 671 aa16.32■□□□□ 0.2
LRRK1-207ENST00000531270 M0QZ92 97 aa16.31■□□□□ 0.2
LRRK1-207ENST00000531270 EXOC7Q9UPT5 735 aa16.31■□□□□ 0.2
LRRK1-207ENST00000531270 PRPF6O94906 941 aaKnown RBP16.31■□□□□ 0.2
LRRK1-207ENST00000531270 U2AF2P26368 475 aaKnown RBP eCLIP16.31■□□□□ 0.2
LRRK1-207ENST00000531270 SLC12A2P55011 1212 aa16.31■□□□□ 0.2
LRRK1-207ENST00000531270 RAB3IPQ96QF0 476 aaPredicted RBP16.31■□□□□ 0.2
LRRK1-207ENST00000531270 NAP1L4Q99733 375 aaKnown RBP16.31■□□□□ 0.2
LRRK1-207ENST00000531270 ARHGEF10LQ9HCE6 1279 aa16.31■□□□□ 0.2
LRRK1-207ENST00000531270 ADGRF5Q8IZF2 1346 aa16.31■□□□□ 0.2
LRRK1-207ENST00000531270 AZI2Q9H6S1 392 aa16.31■□□□□ 0.2
LRRK1-207ENST00000531270 RABGAP1Q9Y3P9 1069 aa16.31■□□□□ 0.2
LRRK1-207ENST00000531270 CCDC141Q6ZP82 1450 aa16.31■□□□□ 0.2
LRRK1-207ENST00000531270 GNPATO15228 680 aa16.31■□□□□ 0.2
LRRK1-207ENST00000531270 ARID4AP29374 1257 aaPredicted RBP16.31■□□□□ 0.2
LRRK1-207ENST00000531270 IFRD2Q12894 506 aaPredicted RBP16.31■□□□□ 0.2
LRRK1-207ENST00000531270 KRBA2Q6ZNG9 492 aa16.31■□□□□ 0.2
LRRK1-207ENST00000531270 SRGAP1Q7Z6B7 1085 aa16.31■□□□□ 0.2
LRRK1-207ENST00000531270 IGSF22Q8N9C0 903 aa16.31■□□□□ 0.2
LRRK1-207ENST00000531270 AFAP1L1Q8TED9 768 aa16.31■□□□□ 0.2
LRRK1-207ENST00000531270 I3L4J1 428 aa16.31■□□□□ 0.2
LRRK1-207ENST00000531270 VSIG1Q86XK7 387 aa16.31■□□□□ 0.2
LRRK1-207ENST00000531270 LRRC59Q96AG4 307 aaKnown RBP16.31■□□□□ 0.2
LRRK1-207ENST00000531270 DAPK1P53355 1430 aa16.3■□□□□ 0.2
LRRK1-207ENST00000531270 EVCP57679 992 aa16.3■□□□□ 0.2
LRRK1-207ENST00000531270 LMNTD2Q8IXW0 634 aa16.3■□□□□ 0.2
LRRK1-207ENST00000531270 TSTA3Q13630 321 aaPredicted RBP16.3■□□□□ 0.2
LRRK1-207ENST00000531270 NFATC2IPQ8NCF5 419 aa16.3■□□□□ 0.2
LRRK1-207ENST00000531270 MGARPQ8TDB4 240 aa16.3■□□□□ 0.2
LRRK1-207ENST00000531270 RILPQ96NA2 401 aa16.3■□□□□ 0.2
LRRK1-207ENST00000531270 ATP8B2P98198 1209 aa16.3■□□□□ 0.2
LRRK1-207ENST00000531270 VWA3BQ502W6 1294 aa16.3■□□□□ 0.2
LRRK1-207ENST00000531270 MED10Q9BTT4 135 aa16.3■□□□□ 0.2
LRRK1-207ENST00000531270 B4E1Z4 1266 aa16.29■□□□□ 0.2
LRRK1-207ENST00000531270 DYMQ7RTS9 669 aa16.29■□□□□ 0.2
LRRK1-207ENST00000531270 KRT15P19012 456 aa16.29■□□□□ 0.2
LRRK1-207ENST00000531270 PLCD1P51178 756 aa16.29■□□□□ 0.2
LRRK1-207ENST00000531270 KSR1Q8IVT5 923 aa16.29■□□□□ 0.2
LRRK1-207ENST00000531270 CDAN1Q8IWY9 1227 aa16.29■□□□□ 0.2
LRRK1-207ENST00000531270 MYCT1Q8N699 235 aa16.29■□□□□ 0.2
LRRK1-207ENST00000531270 WHAMMQ8TF30 809 aa16.29■□□□□ 0.2
LRRK1-207ENST00000531270 DMRT2Q9Y5R5 561 aa16.29■□□□□ 0.2
LRRK1-207ENST00000531270 TBC1D8O95759 1140 aa16.29■□□□□ 0.2
LRRK1-207ENST00000531270 LRMPQ12912 555 aa16.29■□□□□ 0.2
LRRK1-207ENST00000531270 MAP7Q14244 749 aa16.29■□□□□ 0.2
LRRK1-207ENST00000531270 CNNM4Q6P4Q7 775 aa16.29■□□□□ 0.2
LRRK1-207ENST00000531270 CARD10Q9BWT7 1032 aa16.29■□□□□ 0.2
LRRK1-207ENST00000531270 ARMT1Q9H993 441 aa16.29■□□□□ 0.2
LRRK1-207ENST00000531270 VPS37BQ9H9H4 285 aa16.29■□□□□ 0.2
LRRK1-207ENST00000531270 CEP104O60308 925 aa16.29■□□□□ 0.2
LRRK1-207ENST00000531270 ITKQ08881 620 aa16.29■□□□□ 0.2
LRRK1-207ENST00000531270 CEP128Q6ZU80 1094 aa16.29■□□□□ 0.2
LRRK1-207ENST00000531270 CADPS2Q86UW7 1296 aa16.29■□□□□ 0.2
LRRK1-207ENST00000531270 NELFCDQ8IXH7 590 aa16.29■□□□□ 0.2
LRRK1-207ENST00000531270 DDX21Q9NR30 783 aaKnown RBP eCLIP16.29■□□□□ 0.2
LRRK1-207ENST00000531270 BRAPQ7Z569 592 aa16.29■□□□□ 0.2
LRRK1-207ENST00000531270 RBBP5Q15291 538 aaKnown RBP16.28■□□□□ 0.2
LRRK1-207ENST00000531270 NAPGQ99747 312 aaPredicted RBP16.28■□□□□ 0.2
LRRK1-207ENST00000531270 ZRANB1Q9UGI0 708 aa16.28■□□□□ 0.2
LRRK1-207ENST00000531270 GRIN2BQ13224 1484 aa16.28■□□□□ 0.2
LRRK1-207ENST00000531270 RPS6KA2Q15349 733 aa16.28■□□□□ 0.2
LRRK1-207ENST00000531270 FAM47CQ5HY64 1035 aa16.28■□□□□ 0.2
LRRK1-207ENST00000531270 NXNQ6DKJ4 435 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms