RNA–Protein interactions for RNA: ENST00000531056.5

UBXN1-211, Transcript of UBX domain protein 1, humanhuman

TSL 4

Gene UBXN1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-211ENST00000531056 SNCAIPQ9Y6H5 919 aa23.19■■□□□ 1.3
UBXN1-211ENST00000531056 CASP8AP2Q9UKL3 1982 aa23.19■■□□□ 1.3
UBXN1-211ENST00000531056 COL2A1P02458 1487 aaPredicted RBP23.18■■□□□ 1.3
UBXN1-211ENST00000531056 IFIT2P09913 472 aaKnown RBP23.18■■□□□ 1.3
UBXN1-211ENST00000531056 PICALMQ13492 652 aa23.18■■□□□ 1.3
UBXN1-211ENST00000531056 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.18■■□□□ 1.3
UBXN1-211ENST00000531056 CNKSR2Q8WXI2 1034 aa23.18■■□□□ 1.3
UBXN1-211ENST00000531056 ANTXR1Q9H6X2 564 aa23.18■■□□□ 1.3
UBXN1-211ENST00000531056 ZNF112Q9UJU3 913 aa23.18■■□□□ 1.3
UBXN1-211ENST00000531056 LRRCC1Q9C099 1032 aa23.17■■□□□ 1.3
UBXN1-211ENST00000531056 DDTLA6NHG4 134 aaPredicted RBP23.16■■□□□ 1.3
UBXN1-211ENST00000531056 ZKSCAN4Q969J2 545 aaPredicted RBP23.16■■□□□ 1.3
UBXN1-211ENST00000531056 CRBNQ96SW2 442 aa23.16■■□□□ 1.3
UBXN1-211ENST00000531056 DCTPP1Q9H773 170 aa23.16■■□□□ 1.3
UBXN1-211ENST00000531056 AATFQ9NY61 560 aaKnown RBP eCLIP23.16■■□□□ 1.3
UBXN1-211ENST00000531056 PCDHB15Q9Y5E8 787 aa23.16■■□□□ 1.3
UBXN1-211ENST00000531056 SPDYE5A6NIY4 337 aa23.15■■□□□ 1.3
UBXN1-211ENST00000531056 IDH1O75874 414 aaKnown RBP23.15■■□□□ 1.3
UBXN1-211ENST00000531056 INPP5BP32019 993 aa23.15■■□□□ 1.3
UBXN1-211ENST00000531056 INHBEP58166 350 aa23.15■■□□□ 1.3
UBXN1-211ENST00000531056 PPP4CP60510 307 aa23.15■■□□□ 1.3
UBXN1-211ENST00000531056 SH3RF3Q8TEJ3 882 aaPredicted RBP23.15■■□□□ 1.3
UBXN1-211ENST00000531056 CFHR5Q9BXR6 569 aa23.15■■□□□ 1.3
UBXN1-211ENST00000531056 SIPA1L1O43166 1804 aa23.15■■□□□ 1.3
UBXN1-211ENST00000531056 TESPA1A2RU30 521 aaPredicted RBP23.14■■□□□ 1.29
UBXN1-211ENST00000531056 MAP3K10Q02779 954 aa23.14■■□□□ 1.29
UBXN1-211ENST00000531056 IFNL1Q8IU54 200 aa23.14■■□□□ 1.29
UBXN1-211ENST00000531056 TEX11Q8IYF3 940 aa23.14■■□□□ 1.29
UBXN1-211ENST00000531056 MS4A4AQ96JQ5 239 aa23.14■■□□□ 1.29
UBXN1-211ENST00000531056 NOL10Q9BSC4 688 aaKnown RBP23.14■■□□□ 1.29
UBXN1-211ENST00000531056 IGF2BP3O00425 579 aaKnown RBP eCLIP23.13■■□□□ 1.29
UBXN1-211ENST00000531056 SMARCA5O60264 1052 aaPredicted RBP23.13■■□□□ 1.29
UBXN1-211ENST00000531056 BAG3O95817 575 aa23.13■■□□□ 1.29
UBXN1-211ENST00000531056 NOL9Q5SY16 702 aaKnown RBP23.13■■□□□ 1.29
UBXN1-211ENST00000531056 ERO1BQ86YB8 467 aa23.13■■□□□ 1.29
UBXN1-211ENST00000531056 ZSCAN29Q8IWY8 852 aaPredicted RBP23.13■■□□□ 1.29
UBXN1-211ENST00000531056 OTUD5Q96G74 571 aa23.13■■□□□ 1.29
UBXN1-211ENST00000531056 OSBPL5Q9H0X9 879 aaPredicted RBP23.13■■□□□ 1.29
UBXN1-211ENST00000531056 BCL11AQ9H165 835 aa23.13■■□□□ 1.29
UBXN1-211ENST00000531056 DOCK1Q14185 1865 aa23.13■■□□□ 1.29
UBXN1-211ENST00000531056 PHF20L1A8MW92 1017 aa23.12■■□□□ 1.29
UBXN1-211ENST00000531056 TBC1D8O95759 1140 aa23.12■■□□□ 1.29
UBXN1-211ENST00000531056 PLCG2P16885 1265 aa23.12■■□□□ 1.29
UBXN1-211ENST00000531056 CYP7A1P22680 504 aa23.12■■□□□ 1.29
UBXN1-211ENST00000531056 TTF1Q15361 905 aaPredicted RBP23.12■■□□□ 1.29
UBXN1-211ENST00000531056 TMED8Q6PL24 325 aaPredicted RBP23.12■■□□□ 1.29
UBXN1-211ENST00000531056 MAGEB6Q8N7X4 407 aa23.12■■□□□ 1.29
UBXN1-211ENST00000531056 ALDH1A1P00352 501 aa23.11■■□□□ 1.29
UBXN1-211ENST00000531056 SLURP2P0DP57 97 aa23.11■■□□□ 1.29
UBXN1-211ENST00000531056 ATP5JP18859 108 aa23.11■■□□□ 1.29
UBXN1-211ENST00000531056 MAP3K12Q12852 859 aa23.11■■□□□ 1.29
UBXN1-211ENST00000531056 PTPN18Q99952 460 aa23.11■■□□□ 1.29
UBXN1-211ENST00000531056 GTF2A2P52657 109 aa23.1■■□□□ 1.29
UBXN1-211ENST00000531056 DYNLL1P63167 89 aaKnown RBP23.1■■□□□ 1.29
UBXN1-211ENST00000531056 PPIL2Q13356 520 aa23.1■■□□□ 1.29
UBXN1-211ENST00000531056 DNAJC2Q99543 621 aaKnown RBP23.1■■□□□ 1.29
UBXN1-211ENST00000531056 FLT1P17948 1338 aa23.09■■□□□ 1.29
UBXN1-211ENST00000531056 DDX60LQ5H9U9 1706 aaKnown RBP23.09■■□□□ 1.29
UBXN1-211ENST00000531056 GOLIM4O00461 696 aa23.09■■□□□ 1.29
UBXN1-211ENST00000531056 TBC1D12O60347 775 aa23.09■■□□□ 1.29
UBXN1-211ENST00000531056 PPATQ06203 517 aa23.09■■□□□ 1.29
UBXN1-211ENST00000531056 NOM1Q5C9Z4 860 aaKnown RBP23.09■■□□□ 1.29
UBXN1-211ENST00000531056 BRI3BPQ8WY22 251 aa23.09■■□□□ 1.29
UBXN1-211ENST00000531056 R3HDMLQ9H3Y0 253 aa23.09■■□□□ 1.29
UBXN1-211ENST00000531056 PHIPQ8WWQ0 1821 aa23.09■■□□□ 1.29
UBXN1-211ENST00000531056 MYH7P12883 1935 aa23.09■■□□□ 1.29
UBXN1-211ENST00000531056 IRF6O14896 467 aa23.08■■□□□ 1.29
UBXN1-211ENST00000531056 MIGA1Q8NAN2 632 aa23.08■■□□□ 1.29
UBXN1-211ENST00000531056 TGFBRAP1Q8WUH2 860 aa23.08■■□□□ 1.29
UBXN1-211ENST00000531056 EDC3Q96F86 508 aaKnown RBP23.08■■□□□ 1.29
UBXN1-211ENST00000531056 HAUS7Q99871 368 aa23.08■■□□□ 1.29
UBXN1-211ENST00000531056 BOLA2Q9H3K6 86 aa23.08■■□□□ 1.29
UBXN1-211ENST00000531056 ATAD5Q96QE3 1844 aa23.08■■□□□ 1.28
UBXN1-211ENST00000531056 CCL15-CCL14A0A0B4J2E2 113 aa23.07■■□□□ 1.28
UBXN1-211ENST00000531056 PDE6AP16499 860 aa23.07■■□□□ 1.28
UBXN1-211ENST00000531056 CCL15Q16663 113 aa23.07■■□□□ 1.28
UBXN1-211ENST00000531056 CERS3Q8IU89 383 aa23.07■■□□□ 1.28
UBXN1-211ENST00000531056 MAPKAPK5Q8IW41 473 aa23.07■■□□□ 1.28
UBXN1-211ENST00000531056 SCYL3Q8IZE3 742 aa23.07■■□□□ 1.28
UBXN1-211ENST00000531056 PAG1Q9NWQ8 432 aa23.07■■□□□ 1.28
UBXN1-211ENST00000531056 MYH1P12882 1939 aa23.07■■□□□ 1.28
UBXN1-211ENST00000531056 GPR25O00155 361 aa23.06■■□□□ 1.28
UBXN1-211ENST00000531056 OTUD7BQ6GQQ9 843 aa23.06■■□□□ 1.28
UBXN1-211ENST00000531056 ZNF296Q8WUU4 475 aaPredicted RBP23.06■■□□□ 1.28
UBXN1-211ENST00000531056 NAV1Q8NEY1 1877 aa23.05■■□□□ 1.28
UBXN1-211ENST00000531056 TCRBV5S4A2TA0A5A2 114 aa23.05■■□□□ 1.28
UBXN1-211ENST00000531056 FAM196BA6NMK8 535 aa23.05■■□□□ 1.28
UBXN1-211ENST00000531056 CETPP11597 493 aa23.05■■□□□ 1.28
UBXN1-211ENST00000531056 SNAPC2Q13487 334 aa23.05■■□□□ 1.28
UBXN1-211ENST00000531056 SLC9C2Q5TAH2 1124 aa23.05■■□□□ 1.28
UBXN1-211ENST00000531056 RIOK1Q9BRS2 568 aaKnown RBP23.05■■□□□ 1.28
UBXN1-211ENST00000531056 DHX36Q9H2U1 1008 aaKnown RBP23.05■■□□□ 1.28
UBXN1-211ENST00000531056 KCNH4Q9UQ05 1017 aa23.05■■□□□ 1.28
UBXN1-211ENST00000531056 PTPRFP10586 1907 aa23.04■■□□□ 1.28
UBXN1-211ENST00000531056 CTNND1O60716 968 aaKnown RBP23.04■■□□□ 1.28
UBXN1-211ENST00000531056 FAM43AQ8N2R8 423 aa23.04■■□□□ 1.28
UBXN1-211ENST00000531056 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.04■■□□□ 1.28
UBXN1-211ENST00000531056 ECHDC1Q9NTX5 307 aa23.04■■□□□ 1.28
UBXN1-211ENST00000531056 ZNF532Q9HCE3 1301 aa23.04■■□□□ 1.28
UBXN1-211ENST00000531056 PTPRAP18433 802 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 134.8 ms