RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 CAVIN4Q5BKX8 364 aa13.4□□□□□ -0.26
USP35-207ENST00000530546 PHKBQ93100 1093 aa13.4□□□□□ -0.26
USP35-207ENST00000530546 ZNF396Q96N95 335 aaPredicted RBP13.4□□□□□ -0.26
USP35-207ENST00000530546 NACAP1Q9BZK3 213 aa13.4□□□□□ -0.26
USP35-207ENST00000530546 BSDC1Q9NW68 430 aaPredicted RBP13.4□□□□□ -0.26
USP35-207ENST00000530546 ZSWIM5Q9P217 1185 aa13.4□□□□□ -0.26
USP35-207ENST00000530546 JAG2Q9Y219 1238 aa13.4□□□□□ -0.26
USP35-207ENST00000530546 ME1P48163 572 aa13.4□□□□□ -0.26
USP35-207ENST00000530546 ALX1Q15699 326 aa13.39□□□□□ -0.27
USP35-207ENST00000530546 APOA5Q6Q788 366 aa13.39□□□□□ -0.27
USP35-207ENST00000530546 MFSD6Q6ZSS7 791 aa13.39□□□□□ -0.27
USP35-207ENST00000530546 CCAR1Q8IX12 1150 aaKnown RBP13.39□□□□□ -0.27
USP35-207ENST00000530546 ARHGEF1Q92888 912 aaKnown RBP13.39□□□□□ -0.27
USP35-207ENST00000530546 TAF1P21675 1872 aa13.39□□□□□ -0.27
USP35-207ENST00000530546 CDC27P30260 824 aa13.39□□□□□ -0.27
USP35-207ENST00000530546 RPS8P62241 208 aaKnown RBP13.39□□□□□ -0.27
USP35-207ENST00000530546 TYRO3Q06418 890 aa13.39□□□□□ -0.27
USP35-207ENST00000530546 AKNAD1Q5T1N1 836 aa13.39□□□□□ -0.27
USP35-207ENST00000530546 DDX19AQ9NUU7 478 aaKnown RBP13.39□□□□□ -0.27
USP35-207ENST00000530546 RREB1Q92766 1687 aa13.39□□□□□ -0.27
USP35-207ENST00000530546 GOLGA8AA7E2F4 631 aa13.38□□□□□ -0.27
USP35-207ENST00000530546 SMIM22K7EJ46 135 aa13.38□□□□□ -0.27
USP35-207ENST00000530546 ZBTB43O43298 467 aa13.38□□□□□ -0.27
USP35-207ENST00000530546 UBE4AQ14139 1066 aa13.38□□□□□ -0.27
USP35-207ENST00000530546 IGDCC4Q8TDY8 1250 aa13.38□□□□□ -0.27
USP35-207ENST00000530546 FAM84BQ96KN1 310 aaPredicted RBP13.38□□□□□ -0.27
USP35-207ENST00000530546 NYXQ9GZU5 481 aa13.38□□□□□ -0.27
USP35-207ENST00000530546 CLSTN2Q9H4D0 955 aa13.38□□□□□ -0.27
USP35-207ENST00000530546 RCOR1Q9UKL0 485 aa13.38□□□□□ -0.27
USP35-207ENST00000530546 WDR19Q8NEZ3 1342 aa13.38□□□□□ -0.27
USP35-207ENST00000530546 MAGEB6P1A0A0J9YX57 407 aa13.38□□□□□ -0.27
USP35-207ENST00000530546 DYNLL1P63167 89 aaKnown RBP13.38□□□□□ -0.27
USP35-207ENST00000530546 SLC51AQ86UW1 340 aa13.38□□□□□ -0.27
USP35-207ENST00000530546 FBXO18Q8NFZ0 1043 aa13.38□□□□□ -0.27
USP35-207ENST00000530546 ALG1Q9BT22 464 aa13.38□□□□□ -0.27
USP35-207ENST00000530546 LY9Q9HBG7 655 aa13.38□□□□□ -0.27
USP35-207ENST00000530546 ZMYM6O95789 1325 aa13.38□□□□□ -0.27
USP35-207ENST00000530546 CCDC69A6NI79 296 aa13.38□□□□□ -0.27
USP35-207ENST00000530546 TPTE2Q6XPS3 522 aa13.38□□□□□ -0.27
USP35-207ENST00000530546 CCDC82Q8N4S0 544 aa13.38□□□□□ -0.27
USP35-207ENST00000530546 TMEM87BQ96K49 555 aa13.38□□□□□ -0.27
USP35-207ENST00000530546 UBE2Q2LH0YL09 131 aa13.37□□□□□ -0.27
USP35-207ENST00000530546 RFC4P35249 363 aa13.37□□□□□ -0.27
USP35-207ENST00000530546 SF3A1Q15459 793 aaKnown RBP13.37□□□□□ -0.27
USP35-207ENST00000530546 SLC10A5Q5PT55 438 aa13.37□□□□□ -0.27
USP35-207ENST00000530546 RC3H1Q5TC82 1133 aaKnown RBP13.37□□□□□ -0.27
USP35-207ENST00000530546 GOLPH3LQ9H4A5 285 aa13.37□□□□□ -0.27
USP35-207ENST00000530546 FAM53CQ9NYF3 392 aa13.37□□□□□ -0.27
USP35-207ENST00000530546 SLC12A7Q9Y666 1083 aa13.37□□□□□ -0.27
USP35-207ENST00000530546 CLIC4Q9Y696 253 aa13.37□□□□□ -0.27
USP35-207ENST00000530546 MRVI1Q9Y6F6 885 aa13.37□□□□□ -0.27
USP35-207ENST00000530546 KIF28PB7ZC32 967 aa13.37□□□□□ -0.27
USP35-207ENST00000530546 GNAT2P19087 354 aa13.37□□□□□ -0.27
USP35-207ENST00000530546 CPLX2Q6PUV4 134 aaKnown RBP13.37□□□□□ -0.27
USP35-207ENST00000530546 ZNF804BA4D1E1 1349 aa13.37□□□□□ -0.27
USP35-207ENST00000530546 COL5A3P25940 1745 aaPredicted RBP13.36□□□□□ -0.27
USP35-207ENST00000530546 CYP2D7A0A087X1C5 515 aa13.36□□□□□ -0.27
USP35-207ENST00000530546 STK38Q15208 465 aa13.36□□□□□ -0.27
USP35-207ENST00000530546 ANO6Q4KMQ2 910 aa13.36□□□□□ -0.27
USP35-207ENST00000530546 CCDC73Q6ZRK6 1079 aa13.36□□□□□ -0.27
USP35-207ENST00000530546 FAM196AQ6ZSG2 479 aa13.36□□□□□ -0.27
USP35-207ENST00000530546 FSIP1Q8NA03 581 aa13.36□□□□□ -0.27
USP35-207ENST00000530546 CCDC112Q8NEF3 446 aa13.36□□□□□ -0.27
USP35-207ENST00000530546 ZNF397Q8NF99 534 aaPredicted RBP13.36□□□□□ -0.27
USP35-207ENST00000530546 PNPLA7Q6ZV29 1317 aa13.36□□□□□ -0.27
USP35-207ENST00000530546 COL1A1P02452 1464 aaPredicted RBP13.36□□□□□ -0.27
USP35-207ENST00000530546 LUZP1Q86V48 1076 aa13.36□□□□□ -0.27
USP35-207ENST00000530546 SLC26A6Q9BXS9 759 aa13.36□□□□□ -0.27
USP35-207ENST00000530546 KRT23Q9C075 422 aa13.36□□□□□ -0.27
USP35-207ENST00000530546 ARAP2Q8WZ64 1704 aa13.36□□□□□ -0.27
USP35-207ENST00000530546 AP5Z1O43299 807 aa13.35□□□□□ -0.27
USP35-207ENST00000530546 IARSP41252 1262 aaKnown RBP13.35□□□□□ -0.27
USP35-207ENST00000530546 PPARAQ07869 468 aa13.35□□□□□ -0.27
USP35-207ENST00000530546 GNL2Q13823 731 aaKnown RBP13.35□□□□□ -0.27
USP35-207ENST00000530546 SYNE3Q6ZMZ3 975 aa13.35□□□□□ -0.27
USP35-207ENST00000530546 CMTR1Q8N1G2 835 aaKnown RBP13.35□□□□□ -0.27
USP35-207ENST00000530546 GJD4Q96KN9 370 aaPredicted RBP13.35□□□□□ -0.27
USP35-207ENST00000530546 CNNM2Q9H8M5 875 aa13.35□□□□□ -0.27
USP35-207ENST00000530546 A0A087WWV3 80 aa13.35□□□□□ -0.27
USP35-207ENST00000530546 CDKL5O76039 1030 aa13.35□□□□□ -0.27
USP35-207ENST00000530546 HOMEZQ8IX15 550 aa13.35□□□□□ -0.27
USP35-207ENST00000530546 NUP133Q8WUM0 1156 aa13.35□□□□□ -0.27
USP35-207ENST00000530546 ERCC4Q92889 916 aaPredicted RBP13.35□□□□□ -0.27
USP35-207ENST00000530546 FBXW7Q969H0 707 aa13.35□□□□□ -0.27
USP35-207ENST00000530546 PCDHA7Q9UN72 937 aa13.35□□□□□ -0.27
USP35-207ENST00000530546 KIF23Q02241 960 aaPredicted RBP13.35□□□□□ -0.27
USP35-207ENST00000530546 WTAPQ15007 396 aa13.35□□□□□ -0.27
USP35-207ENST00000530546 TRAPPC3LQ5T215 181 aa13.35□□□□□ -0.27
USP35-207ENST00000530546 MYSM1Q5VVJ2 828 aa13.35□□□□□ -0.27
USP35-207ENST00000530546 PLCD3Q8N3E9 789 aa13.35□□□□□ -0.27
USP35-207ENST00000530546 ERICH2A1L162 156 aa13.34□□□□□ -0.27
USP35-207ENST00000530546 RANBP6O60518 1105 aaKnown RBP13.34□□□□□ -0.27
USP35-207ENST00000530546 PRDM1O75626 825 aa13.34□□□□□ -0.27
USP35-207ENST00000530546 HIBADHP31937 336 aaKnown RBP13.34□□□□□ -0.27
USP35-207ENST00000530546 KRT40Q6A162 431 aa13.34□□□□□ -0.27
USP35-207ENST00000530546 TXNRD3Q86VQ6 643 aa13.34□□□□□ -0.27
USP35-207ENST00000530546 STAG1Q8WVM7 1258 aa13.34□□□□□ -0.27
USP35-207ENST00000530546 DNAJC25Q9H1X3 360 aa13.34□□□□□ -0.27
USP35-207ENST00000530546 FAM217BQ9NTX9 383 aaPredicted RBP13.34□□□□□ -0.27
USP35-207ENST00000530546 BCORQ6W2J9 1755 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms