RNA–Protein interactions for RNA: ENST00000530495.1

CAPN1-219, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-219ENST00000530495 PDS5AQ29RF7 1337 aaKnown RBP18.54■□□□□ 0.56
CAPN1-219ENST00000530495 MYPNQ86TC9 1320 aa18.54■□□□□ 0.56
CAPN1-219ENST00000530495 PTPRAP18433 802 aa18.54■□□□□ 0.56
CAPN1-219ENST00000530495 ADORA1P30542 326 aa18.54■□□□□ 0.56
CAPN1-219ENST00000530495 TIMM10P62072 90 aa18.54■□□□□ 0.56
CAPN1-219ENST00000530495 SH3BP5LQ7L8J4 393 aa18.54■□□□□ 0.56
CAPN1-219ENST00000530495 NKX2-3Q8TAU0 364 aa18.54■□□□□ 0.56
CAPN1-219ENST00000530495 AFG3L2Q9Y4W6 797 aa18.54■□□□□ 0.56
CAPN1-219ENST00000530495 A0A0G2JLL6 359 aaPredicted RBP18.53■□□□□ 0.56
CAPN1-219ENST00000530495 H0YGN5 161 aa18.53■□□□□ 0.56
CAPN1-219ENST00000530495 CYP2C8P10632 490 aa18.53■□□□□ 0.56
CAPN1-219ENST00000530495 FCGRTP55899 365 aa18.53■□□□□ 0.56
CAPN1-219ENST00000530495 RASGRF1Q13972 1273 aa18.53■□□□□ 0.56
CAPN1-219ENST00000530495 PRRT2Q7Z6L0 340 aaPredicted RBP18.53■□□□□ 0.56
CAPN1-219ENST00000530495 SLF2Q8IX21 1173 aa18.53■□□□□ 0.56
CAPN1-219ENST00000530495 SHISA4Q96DD7 197 aa18.53■□□□□ 0.56
CAPN1-219ENST00000530495 PICK1Q9NRD5 415 aa18.53■□□□□ 0.56
CAPN1-219ENST00000530495 SLC45A1Q9Y2W3 748 aa18.53■□□□□ 0.56
CAPN1-219ENST00000530495 RFX7Q2KHR2 1363 aa18.53■□□□□ 0.56
CAPN1-219ENST00000530495 DDTLA6NHG4 134 aaPredicted RBP18.52■□□□□ 0.56
CAPN1-219ENST00000530495 CTNND1O60716 968 aaKnown RBP18.52■□□□□ 0.56
CAPN1-219ENST00000530495 GJB1P08034 283 aa18.52■□□□□ 0.56
CAPN1-219ENST00000530495 GJA8P48165 433 aa18.52■□□□□ 0.56
CAPN1-219ENST00000530495 SPTY2D1Q68D10 685 aaPredicted RBP18.52■□□□□ 0.56
CAPN1-219ENST00000530495 DZIP1Q86YF9 867 aaKnown RBP18.52■□□□□ 0.56
CAPN1-219ENST00000530495 ZSCAN29Q8IWY8 852 aaPredicted RBP18.52■□□□□ 0.56
CAPN1-219ENST00000530495 MEIS3Q99687 375 aa18.52■□□□□ 0.56
CAPN1-219ENST00000530495 ABCF2Q9UG63 623 aa18.52■□□□□ 0.56
CAPN1-219ENST00000530495 CCL5P13501 91 aa18.51■□□□□ 0.55
CAPN1-219ENST00000530495 PRKCZQ05513 592 aa18.51■□□□□ 0.55
CAPN1-219ENST00000530495 UBE2Q1Q7Z7E8 422 aa18.51■□□□□ 0.55
CAPN1-219ENST00000530495 AKAP2Q9Y2D5 859 aa18.51■□□□□ 0.55
CAPN1-219ENST00000530495 PHIPQ8WWQ0 1821 aa18.51■□□□□ 0.55
CAPN1-219ENST00000530495 PTPRFP10586 1907 aa18.51■□□□□ 0.55
CAPN1-219ENST00000530495 A0A1B0GUL7 405 aa18.5■□□□□ 0.55
CAPN1-219ENST00000530495 UBXN2AP68543 259 aa18.5■□□□□ 0.55
CAPN1-219ENST00000530495 XAGE2Q96GT9 111 aa18.5■□□□□ 0.55
CAPN1-219ENST00000530495 RNF208Q9H0X6 261 aa18.5■□□□□ 0.55
CAPN1-219ENST00000530495 DDX4Q9NQI0 724 aaKnown RBP18.5■□□□□ 0.55
CAPN1-219ENST00000530495 BIN2Q9UBW5 565 aaPredicted RBP18.5■□□□□ 0.55
CAPN1-219ENST00000530495 GABRQQ9UN88 632 aa18.5■□□□□ 0.55
CAPN1-219ENST00000530495 GPR75-ASB3A0A0A6YYF3 556 aa18.49■□□□□ 0.55
CAPN1-219ENST00000530495 TBC1D12O60347 775 aa18.49■□□□□ 0.55
CAPN1-219ENST00000530495 NPM3O75607 178 aaKnown RBP18.49■□□□□ 0.55
CAPN1-219ENST00000530495 BTDP43251 543 aa18.49■□□□□ 0.55
CAPN1-219ENST00000530495 TFCP2Q12800 502 aa18.49■□□□□ 0.55
CAPN1-219ENST00000530495 GADL1Q6ZQY3 521 aa18.49■□□□□ 0.55
CAPN1-219ENST00000530495 SLAIN1Q8ND83 568 aa18.49■□□□□ 0.55
CAPN1-219ENST00000530495 ARHGAP45Q92619 1136 aa18.49■□□□□ 0.55
CAPN1-219ENST00000530495 DPF3Q92784 378 aa18.49■□□□□ 0.55
CAPN1-219ENST00000530495 DOCK1Q14185 1865 aa18.49■□□□□ 0.55
CAPN1-219ENST00000530495 MROH7-TTC4A0A0A0MT08 1334 aa18.49■□□□□ 0.55
CAPN1-219ENST00000530495 SRGAP3O43295 1099 aa18.48■□□□□ 0.55
CAPN1-219ENST00000530495 GNAI3P08754 354 aa18.48■□□□□ 0.55
CAPN1-219ENST00000530495 SLURP2P0DP57 97 aa18.48■□□□□ 0.55
CAPN1-219ENST00000530495 RHBDL3P58872 404 aa18.48■□□□□ 0.55
CAPN1-219ENST00000530495 MECOMQ03112 1051 aa18.48■□□□□ 0.55
CAPN1-219ENST00000530495 PICALMQ13492 652 aa18.48■□□□□ 0.55
CAPN1-219ENST00000530495 MTX1Q13505 466 aa18.48■□□□□ 0.55
CAPN1-219ENST00000530495 MVPQ14764 893 aaKnown RBP18.48■□□□□ 0.55
CAPN1-219ENST00000530495 ERICH6Q7L0X2 663 aa18.48■□□□□ 0.55
CAPN1-219ENST00000530495 ZNF384Q8TF68 577 aa18.48■□□□□ 0.55
CAPN1-219ENST00000530495 MAP4K4O95819 1239 aaPredicted RBP18.47■□□□□ 0.55
CAPN1-219ENST00000530495 RARSP54136 660 aaKnown RBP18.47■□□□□ 0.55
CAPN1-219ENST00000530495 PXYLP1Q8TE99 480 aa18.47■□□□□ 0.55
CAPN1-219ENST00000530495 TRIM75PA6NK02 468 aa18.46■□□□□ 0.55
CAPN1-219ENST00000530495 ADCY3O60266 1144 aa18.46■□□□□ 0.55
CAPN1-219ENST00000530495 FLT3LGP49771 235 aa18.46■□□□□ 0.55
CAPN1-219ENST00000530495 IRF5Q13568 498 aa18.46■□□□□ 0.55
CAPN1-219ENST00000530495 U2AF1L4Q8WU68 220 aaKnown RBP18.46■□□□□ 0.55
CAPN1-219ENST00000530495 HTATIP2Q9BUP3 242 aa18.46■□□□□ 0.55
CAPN1-219ENST00000530495 UNC93B1Q9H1C4 597 aa18.46■□□□□ 0.55
CAPN1-219ENST00000530495 HMG20BQ9P0W2 317 aa18.46■□□□□ 0.55
CAPN1-219ENST00000530495 AGTPBP1Q9UPW5 1226 aa18.46■□□□□ 0.55
CAPN1-219ENST00000530495 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.46■□□□□ 0.55
CAPN1-219ENST00000530495 CEP290O15078 2479 aa18.45■□□□□ 0.54
CAPN1-219ENST00000530495 SGPL1O95470 568 aa18.45■□□□□ 0.54
CAPN1-219ENST00000530495 LDHCP07864 332 aa18.45■□□□□ 0.54
CAPN1-219ENST00000530495 CAPN2P17655 700 aa18.45■□□□□ 0.54
CAPN1-219ENST00000530495 SMCR8Q8TEV9 937 aaPredicted RBP18.45■□□□□ 0.54
CAPN1-219ENST00000530495 NEUROD6Q96NK8 337 aa18.45■□□□□ 0.54
CAPN1-219ENST00000530495 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.45■□□□□ 0.54
CAPN1-219ENST00000530495 TNPO2O14787 897 aaKnown RBP18.44■□□□□ 0.54
CAPN1-219ENST00000530495 GSTO1P78417 241 aa18.44■□□□□ 0.54
CAPN1-219ENST00000530495 CHRDL2Q6WN34 429 aa18.44■□□□□ 0.54
CAPN1-219ENST00000530495 SPATA5Q8NB90 893 aa18.44■□□□□ 0.54
CAPN1-219ENST00000530495 NSUN4Q96CB9 384 aaKnown RBP18.44■□□□□ 0.54
CAPN1-219ENST00000530495 OSBPL5Q9H0X9 879 aaPredicted RBP18.44■□□□□ 0.54
CAPN1-219ENST00000530495 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.44■□□□□ 0.54
CAPN1-219ENST00000530495 ELNP15502 786 aa18.43■□□□□ 0.54
CAPN1-219ENST00000530495 TBC1D9Q6ZT07 1266 aa18.43■□□□□ 0.54
CAPN1-219ENST00000530495 CCDC84Q86UT8 332 aaPredicted RBP18.43■□□□□ 0.54
CAPN1-219ENST00000530495 ANKRD13CQ8N6S4 541 aa18.43■□□□□ 0.54
CAPN1-219ENST00000530495 PROCA1Q8NCQ7 364 aaPredicted RBP18.43■□□□□ 0.54
CAPN1-219ENST00000530495 RBM27Q9P2N5 1060 aaKnown RBP18.43■□□□□ 0.54
CAPN1-219ENST00000530495 DOCK3Q8IZD9 2030 aa18.42■□□□□ 0.54
CAPN1-219ENST00000530495 COL2A1P02458 1487 aaPredicted RBP18.42■□□□□ 0.54
CAPN1-219ENST00000530495 INHAP05111 366 aa18.42■□□□□ 0.54
CAPN1-219ENST00000530495 ARID4AP29374 1257 aaPredicted RBP18.42■□□□□ 0.54
CAPN1-219ENST00000530495 SPP2Q13103 211 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms