RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 TCP10L2B9ZVM9 353 aa12.7□□□□□ -0.38
SOX6-213ENST00000530378 WDHD1O75717 1129 aaPredicted RBP12.7□□□□□ -0.38
SOX6-213ENST00000530378 GNAT2P19087 354 aa12.7□□□□□ -0.38
SOX6-213ENST00000530378 MCCP23508 829 aa12.7□□□□□ -0.38
SOX6-213ENST00000530378 HDLBPQ00341 1268 aaKnown RBP12.7□□□□□ -0.38
SOX6-213ENST00000530378 CTDSPL2Q05D32 466 aa12.7□□□□□ -0.38
SOX6-213ENST00000530378 KIF4BQ2VIQ3 1234 aa12.7□□□□□ -0.38
SOX6-213ENST00000530378 NACAP1Q9BZK3 213 aa12.7□□□□□ -0.38
SOX6-213ENST00000530378 MCM9Q9NXL9 1143 aa12.7□□□□□ -0.38
SOX6-213ENST00000530378 POLR2AP24928 1970 aaKnown RBP12.7□□□□□ -0.38
SOX6-213ENST00000530378 WNT10BO00744 389 aa12.69□□□□□ -0.38
SOX6-213ENST00000530378 CYP21A2P08686 494 aa12.69□□□□□ -0.38
SOX6-213ENST00000530378 PLCG2P16885 1265 aa12.69□□□□□ -0.38
SOX6-213ENST00000530378 LMOD1P29536 600 aaPredicted RBP12.69□□□□□ -0.38
SOX6-213ENST00000530378 HSPA4P34932 840 aa12.69□□□□□ -0.38
SOX6-213ENST00000530378 ZNF280AP59817 542 aaPredicted RBP12.69□□□□□ -0.38
SOX6-213ENST00000530378 COL9A3Q14050 684 aaPredicted RBP12.69□□□□□ -0.38
SOX6-213ENST00000530378 NECTIN1Q15223 517 aa12.69□□□□□ -0.38
SOX6-213ENST00000530378 ZFPM1Q8IX07 1006 aa12.69□□□□□ -0.38
SOX6-213ENST00000530378 ZNF526Q8TF50 670 aaPredicted RBP12.69□□□□□ -0.38
SOX6-213ENST00000530378 DPF2Q92785 391 aa12.69□□□□□ -0.38
SOX6-213ENST00000530378 SNX14Q9Y5W7 946 aa12.69□□□□□ -0.38
SOX6-213ENST00000530378 MYH8P13535 1937 aa12.69□□□□□ -0.38
SOX6-213ENST00000530378 H7C1D1 291 aa12.69□□□□□ -0.38
SOX6-213ENST00000530378 DPY19L2Q6NUT2 758 aa12.69□□□□□ -0.38
SOX6-213ENST00000530378 TMED8Q6PL24 325 aaPredicted RBP12.69□□□□□ -0.38
SOX6-213ENST00000530378 SAMD1Q6SPF0 538 aaPredicted RBP12.69□□□□□ -0.38
SOX6-213ENST00000530378 TBC1D10CQ8IV04 446 aa12.69□□□□□ -0.38
SOX6-213ENST00000530378 NBPF3Q9H094 633 aa12.69□□□□□ -0.38
SOX6-213ENST00000530378 INCENPQ9NQS7 918 aa12.69□□□□□ -0.38
SOX6-213ENST00000530378 ZNF70Q9UC06 446 aaPredicted RBP12.69□□□□□ -0.38
SOX6-213ENST00000530378 SIPA1L1O43166 1804 aa12.69□□□□□ -0.38
SOX6-213ENST00000530378 USP17L12C9JPN9 530 aa12.68□□□□□ -0.38
SOX6-213ENST00000530378 USP17L21D6R901 530 aa12.68□□□□□ -0.38
SOX6-213ENST00000530378 EIF5BO60841 1220 aaKnown RBP12.68□□□□□ -0.38
SOX6-213ENST00000530378 IGSF3O75054 1194 aa12.68□□□□□ -0.38
SOX6-213ENST00000530378 SLURP2P0DP57 97 aa12.68□□□□□ -0.38
SOX6-213ENST00000530378 CPA1P15085 419 aa12.68□□□□□ -0.38
SOX6-213ENST00000530378 CTR9Q6PD62 1173 aa12.68□□□□□ -0.38
SOX6-213ENST00000530378 STOX1Q6ZVD7 989 aa12.68□□□□□ -0.38
SOX6-213ENST00000530378 DDRGK1Q96HY6 314 aa12.68□□□□□ -0.38
SOX6-213ENST00000530378 RBM25P49756 843 aaKnown RBP12.67□□□□□ -0.38
SOX6-213ENST00000530378 IMMTQ16891 758 aaKnown RBP12.67□□□□□ -0.38
SOX6-213ENST00000530378 ADCK5Q3MIX3 580 aa12.67□□□□□ -0.38
SOX6-213ENST00000530378 SPDYE2Q495Y8 402 aa12.67□□□□□ -0.38
SOX6-213ENST00000530378 ZBED3Q96IU2 234 aaPredicted RBP12.67□□□□□ -0.38
SOX6-213ENST00000530378 MRIQ9BWK5 157 aa12.67□□□□□ -0.38
SOX6-213ENST00000530378 ATP8A2Q9NTI2 1148 aa12.67□□□□□ -0.38
SOX6-213ENST00000530378 TMOD2Q9NZR1 351 aa12.67□□□□□ -0.38
SOX6-213ENST00000530378 FAM198AQ9UFP1 575 aa12.67□□□□□ -0.38
SOX6-213ENST00000530378 GLTPD2A6NH11 291 aa12.67□□□□□ -0.38
SOX6-213ENST00000530378 ZNF213O14771 459 aa12.67□□□□□ -0.38
SOX6-213ENST00000530378 MYO1BO43795 1136 aa12.67□□□□□ -0.38
SOX6-213ENST00000530378 PRDM1O75626 825 aa12.67□□□□□ -0.38
SOX6-213ENST00000530378 POLR3DP05423 398 aaPredicted RBP12.67□□□□□ -0.38
SOX6-213ENST00000530378 PPARAQ07869 468 aa12.67□□□□□ -0.38
SOX6-213ENST00000530378 RNF20Q5VTR2 975 aa12.67□□□□□ -0.38
SOX6-213ENST00000530378 ZSCAN29Q8IWY8 852 aaPredicted RBP12.67□□□□□ -0.38
SOX6-213ENST00000530378 CDAN1Q8IWY9 1227 aa12.67□□□□□ -0.38
SOX6-213ENST00000530378 DYNLL2Q96FJ2 89 aa12.67□□□□□ -0.38
SOX6-213ENST00000530378 JAKMIP1Q96N16 626 aaKnown RBP12.67□□□□□ -0.38
SOX6-213ENST00000530378 KIF2CQ99661 725 aa12.67□□□□□ -0.38
SOX6-213ENST00000530378 UPF3BQ9BZI7 483 aaKnown RBP12.67□□□□□ -0.38
SOX6-213ENST00000530378 TOMM22Q9NS69 142 aa12.67□□□□□ -0.38
SOX6-213ENST00000530378 MKRN1Q9UHC7 482 aaKnown RBP12.67□□□□□ -0.38
SOX6-213ENST00000530378 CTNNA3Q9UI47 895 aa12.67□□□□□ -0.38
SOX6-213ENST00000530378 TACC3Q9Y6A5 838 aa12.67□□□□□ -0.38
SOX6-213ENST00000530378 SCN4AP35499 1836 aa12.66□□□□□ -0.38
SOX6-213ENST00000530378 ZKSCAN1P17029 563 aaPredicted RBP12.66□□□□□ -0.38
SOX6-213ENST00000530378 PLCD1P51178 756 aa12.66□□□□□ -0.38
SOX6-213ENST00000530378 HIRAP54198 1017 aaPredicted RBP12.66□□□□□ -0.38
SOX6-213ENST00000530378 ALX1Q15699 326 aa12.66□□□□□ -0.38
SOX6-213ENST00000530378 RRP12Q5JTH9 1297 aaKnown RBP12.66□□□□□ -0.38
SOX6-213ENST00000530378 CERS3Q8IU89 383 aa12.66□□□□□ -0.38
SOX6-213ENST00000530378 MTMR14Q8NCE2 650 aa12.66□□□□□ -0.38
SOX6-213ENST00000530378 SLC44A5Q8NCS7 719 aa12.66□□□□□ -0.38
SOX6-213ENST00000530378 NKX2-3Q8TAU0 364 aa12.66□□□□□ -0.38
SOX6-213ENST00000530378 TCEANC2Q96MN5 208 aa12.66□□□□□ -0.38
SOX6-213ENST00000530378 OSBPL5Q9H0X9 879 aaPredicted RBP12.66□□□□□ -0.38
SOX6-213ENST00000530378 GGA3Q9NZ52 723 aa12.66□□□□□ -0.38
SOX6-213ENST00000530378 HACL1Q9UJ83 578 aa12.66□□□□□ -0.38
SOX6-213ENST00000530378 ZMYM6O95789 1325 aa12.66□□□□□ -0.38
SOX6-213ENST00000530378 NEDD4P46934 1319 aa12.66□□□□□ -0.38
SOX6-213ENST00000530378 ZC3H4Q9UPT8 1303 aaKnown RBP12.66□□□□□ -0.38
SOX6-213ENST00000530378 WDR90Q96KV7 1748 aa12.66□□□□□ -0.38
SOX6-213ENST00000530378 FAM196BA6NMK8 535 aa12.65□□□□□ -0.38
SOX6-213ENST00000530378 E7EWF7 191 aa12.65□□□□□ -0.38
SOX6-213ENST00000530378 CASTP20810 708 aaKnown RBP12.65□□□□□ -0.38
SOX6-213ENST00000530378 EAPPQ56P03 285 aaPredicted RBP12.65□□□□□ -0.38
SOX6-213ENST00000530378 ANGEL2Q5VTE6 544 aaKnown RBP12.65□□□□□ -0.38
SOX6-213ENST00000530378 TMEM39BQ9GZU3 492 aa12.65□□□□□ -0.38
SOX6-213ENST00000530378 ARPP21Q9UBL0 812 aaPredicted RBP12.65□□□□□ -0.38
SOX6-213ENST00000530378 RBM19Q9Y4C8 960 aaKnown RBP12.65□□□□□ -0.38
SOX6-213ENST00000530378 CNTNAP1P78357 1384 aa12.65□□□□□ -0.38
SOX6-213ENST00000530378 RPAP1Q9BWH6 1393 aaPredicted RBP12.65□□□□□ -0.38
SOX6-213ENST00000530378 DDTLA6NHG4 134 aaPredicted RBP12.65□□□□□ -0.39
SOX6-213ENST00000530378 DLK2Q6UY11 383 aa12.65□□□□□ -0.39
SOX6-213ENST00000530378 NOL8Q76FK4 1167 aaKnown RBP12.65□□□□□ -0.39
SOX6-213ENST00000530378 SH3BP5LQ7L8J4 393 aa12.65□□□□□ -0.39
SOX6-213ENST00000530378 CHST3Q7LGC8 479 aa12.65□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms