RNA–Protein interactions for RNA: ENST00000529764.1

LTBP3-215, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 5

Gene LTBP3, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-215ENST00000529764 COG6Q9Y2V7 657 aa8.06□□□□□ -1.12
LTBP3-215ENST00000529764 GAKO14976 1311 aa8.05□□□□□ -1.12
LTBP3-215ENST00000529764 CCL15-CCL14A0A0B4J2E2 113 aa8.05□□□□□ -1.12
LTBP3-215ENST00000529764 SPDYE5A6NIY4 337 aa8.05□□□□□ -1.12
LTBP3-215ENST00000529764 TBC1D8O95759 1140 aa8.05□□□□□ -1.12
LTBP3-215ENST00000529764 RLBP1P12271 317 aa8.05□□□□□ -1.12
LTBP3-215ENST00000529764 RGS3P49796 1198 aa8.05□□□□□ -1.12
LTBP3-215ENST00000529764 PPATQ06203 517 aa8.05□□□□□ -1.12
LTBP3-215ENST00000529764 PPIL2Q13356 520 aa8.05□□□□□ -1.12
LTBP3-215ENST00000529764 PICALMQ13492 652 aa8.05□□□□□ -1.12
LTBP3-215ENST00000529764 VGLL4Q14135 290 aa8.05□□□□□ -1.12
LTBP3-215ENST00000529764 TAF1CQ15572 869 aaPredicted RBP8.05□□□□□ -1.12
LTBP3-215ENST00000529764 CCL15Q16663 113 aa8.05□□□□□ -1.12
LTBP3-215ENST00000529764 MIGA2Q7L4E1 593 aa8.05□□□□□ -1.12
LTBP3-215ENST00000529764 AACSQ86V21 672 aa8.05□□□□□ -1.12
LTBP3-215ENST00000529764 CLMNQ96JQ2 1002 aa8.05□□□□□ -1.12
LTBP3-215ENST00000529764 TBC1D2Q9BYX2 928 aa8.05□□□□□ -1.12
LTBP3-215ENST00000529764 MCOLN1Q9GZU1 580 aa8.05□□□□□ -1.12
LTBP3-215ENST00000529764 DHX36Q9H2U1 1008 aaKnown RBP8.05□□□□□ -1.12
LTBP3-215ENST00000529764 ZCCHC17Q9NP64 241 aaKnown RBP8.05□□□□□ -1.12
LTBP3-215ENST00000529764 FZD1Q9UP38 647 aa8.05□□□□□ -1.12
LTBP3-215ENST00000529764 PCNTO95613 3336 aa8.05□□□□□ -1.12
LTBP3-215ENST00000529764 GPR75-ASB3A0A0A6YYF3 556 aa8.04□□□□□ -1.12
LTBP3-215ENST00000529764 IDH1O75874 414 aaKnown RBP8.04□□□□□ -1.12
LTBP3-215ENST00000529764 HLA-DOAP06340 250 aa8.04□□□□□ -1.12
LTBP3-215ENST00000529764 MCAMP43121 646 aa8.04□□□□□ -1.12
LTBP3-215ENST00000529764 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.04□□□□□ -1.12
LTBP3-215ENST00000529764 FASTKD5Q7L8L6 764 aaKnown RBP8.04□□□□□ -1.12
LTBP3-215ENST00000529764 TEX11Q8IYF3 940 aa8.04□□□□□ -1.12
LTBP3-215ENST00000529764 CRACR2BQ8N4Y2 399 aaPredicted RBP8.04□□□□□ -1.12
LTBP3-215ENST00000529764 ZNF296Q8WUU4 475 aaPredicted RBP8.04□□□□□ -1.12
LTBP3-215ENST00000529764 NSUN4Q96CB9 384 aaKnown RBP8.04□□□□□ -1.12
LTBP3-215ENST00000529764 GPATCH3Q96I76 525 aa8.04□□□□□ -1.12
LTBP3-215ENST00000529764 DBNDD2Q9BQY9 259 aa8.04□□□□□ -1.12
LTBP3-215ENST00000529764 CCDC8Q9H0W5 538 aaPredicted RBP8.04□□□□□ -1.12
LTBP3-215ENST00000529764 BCL11AQ9H165 835 aa8.04□□□□□ -1.12
LTBP3-215ENST00000529764 EXOC6BQ9Y2D4 811 aa8.04□□□□□ -1.12
LTBP3-215ENST00000529764 SSC5DA1L4H1 1573 aa8.04□□□□□ -1.12
LTBP3-215ENST00000529764 AOX1Q06278 1338 aa8.03□□□□□ -1.12
LTBP3-215ENST00000529764 DOCK2Q92608 1830 aa8.03□□□□□ -1.12
LTBP3-215ENST00000529764 TESPA1A2RU30 521 aaPredicted RBP8.03□□□□□ -1.12
LTBP3-215ENST00000529764 APBB1O00213 710 aa8.03□□□□□ -1.12
LTBP3-215ENST00000529764 CTNND1O60716 968 aaKnown RBP8.03□□□□□ -1.12
LTBP3-215ENST00000529764 ATXN8OSP0DMR3 200 aa8.03□□□□□ -1.12
LTBP3-215ENST00000529764 USP5P45974 858 aa8.03□□□□□ -1.12
LTBP3-215ENST00000529764 SP3Q02447 781 aa8.03□□□□□ -1.12
LTBP3-215ENST00000529764 TBC1D9Q6ZT07 1266 aa8.03□□□□□ -1.12
LTBP3-215ENST00000529764 AMOTL1Q8IY63 956 aa8.03□□□□□ -1.12
LTBP3-215ENST00000529764 RHPN1Q8TCX5 695 aa8.03□□□□□ -1.12
LTBP3-215ENST00000529764 ZKSCAN4Q969J2 545 aaPredicted RBP8.03□□□□□ -1.12
LTBP3-215ENST00000529764 DDRGK1Q96HY6 314 aa8.03□□□□□ -1.12
LTBP3-215ENST00000529764 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.03□□□□□ -1.129e-8■■□□□ 13.6
LTBP3-215ENST00000529764 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.03□□□□□ -1.12
LTBP3-215ENST00000529764 AS3MTQ9HBK9 375 aa8.03□□□□□ -1.12
LTBP3-215ENST00000529764 SNRKQ9NRH2 765 aa8.03□□□□□ -1.12
LTBP3-215ENST00000529764 ZBTB40Q9NUA8 1239 aa8.03□□□□□ -1.12
LTBP3-215ENST00000529764 HERC5Q9UII4 1024 aaKnown RBP8.03□□□□□ -1.12
LTBP3-215ENST00000529764 OTOFQ9HC10 1997 aa8.02□□□□□ -1.12
LTBP3-215ENST00000529764 LAMB1P07942 1786 aa8.02□□□□□ -1.13
LTBP3-215ENST00000529764 MAST2Q6P0Q8 1798 aa8.02□□□□□ -1.13
LTBP3-215ENST00000529764 PITPNM1O00562 1244 aa8.02□□□□□ -1.13
LTBP3-215ENST00000529764 CXCL11O14625 94 aa8.02□□□□□ -1.13
LTBP3-215ENST00000529764 TBC1D12O60347 775 aa8.02□□□□□ -1.13
LTBP3-215ENST00000529764 CYP7A1P22680 504 aa8.02□□□□□ -1.13
LTBP3-215ENST00000529764 HOXD10P28358 340 aa8.02□□□□□ -1.13
LTBP3-215ENST00000529764 ZAP70P43403 619 aa8.02□□□□□ -1.13
LTBP3-215ENST00000529764 NFIAQ12857 509 aa8.02□□□□□ -1.13
LTBP3-215ENST00000529764 PABPC4Q13310 644 aaKnown RBP eCLIP8.02□□□□□ -1.13
LTBP3-215ENST00000529764 LRRFIP1Q32MZ4 808 aaKnown RBP8.02□□□□□ -1.13
LTBP3-215ENST00000529764 NOL9Q5SY16 702 aaKnown RBP8.02□□□□□ -1.13
LTBP3-215ENST00000529764 ZSCAN25Q6NSZ9 544 aa8.02□□□□□ -1.13
LTBP3-215ENST00000529764 FBXO46Q6PJ61 603 aaPredicted RBP8.02□□□□□ -1.13
LTBP3-215ENST00000529764 NBPF11Q86T75 865 aa8.02□□□□□ -1.13
LTBP3-215ENST00000529764 SCYL3Q8IZE3 742 aa8.02□□□□□ -1.13
LTBP3-215ENST00000529764 LRRCC1Q9C099 1032 aa8.02□□□□□ -1.13
LTBP3-215ENST00000529764 OSBPL5Q9H0X9 879 aaPredicted RBP8.02□□□□□ -1.13
LTBP3-215ENST00000529764 IL1RAPL2Q9NP60 686 aa8.02□□□□□ -1.13
LTBP3-215ENST00000529764 AATFQ9NY61 560 aaKnown RBP eCLIP8.02□□□□□ -1.13
LTBP3-215ENST00000529764 PI4KBQ9UBF8 816 aa8.02□□□□□ -1.13
LTBP3-215ENST00000529764 FAM198AQ9UFP1 575 aa8.02□□□□□ -1.13
LTBP3-215ENST00000529764 ZNF112Q9UJU3 913 aa8.02□□□□□ -1.13
LTBP3-215ENST00000529764 DBNLQ9UJU6 430 aaKnown RBP8.02□□□□□ -1.13
LTBP3-215ENST00000529764 TRIM17Q9Y577 477 aa8.02□□□□□ -1.13
LTBP3-215ENST00000529764 SNCAIPQ9Y6H5 919 aa8.02□□□□□ -1.13
LTBP3-215ENST00000529764 COL2A1P02458 1487 aaPredicted RBP8.01□□□□□ -1.13
LTBP3-215ENST00000529764 IGF2BP3O00425 579 aaKnown RBP eCLIP8.01□□□□□ -1.13
LTBP3-215ENST00000529764 IRF6O14896 467 aa8.01□□□□□ -1.13
LTBP3-215ENST00000529764 GNRH1P01148 92 aa8.01□□□□□ -1.13
LTBP3-215ENST00000529764 CYP2E1P05181 493 aaPredicted RBP8.01□□□□□ -1.13
LTBP3-215ENST00000529764 INPP5BP32019 993 aa8.01□□□□□ -1.13
LTBP3-215ENST00000529764 FXR2P51116 673 aaKnown RBP eCLIP8.01□□□□□ -1.13
LTBP3-215ENST00000529764 PPP4CP60510 307 aa8.01□□□□□ -1.13
LTBP3-215ENST00000529764 CRHR2Q13324 411 aa8.01□□□□□ -1.13
LTBP3-215ENST00000529764 PI16Q6UXB8 463 aa8.01□□□□□ -1.13
LTBP3-215ENST00000529764 ANKRD23Q86SG2 305 aa8.01□□□□□ -1.13
LTBP3-215ENST00000529764 TTC6Q86TZ1 520 aa8.01□□□□□ -1.13
LTBP3-215ENST00000529764 FOXP4Q8IVH2 680 aaPredicted RBP8.01□□□□□ -1.13
LTBP3-215ENST00000529764 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.01□□□□□ -1.13
LTBP3-215ENST00000529764 EAF2Q96CJ1 260 aaPredicted RBP8.01□□□□□ -1.13
LTBP3-215ENST00000529764 MS4A4AQ96JQ5 239 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms