RNA–Protein interactions for RNA: ENST00000529745.5

CCDC90B-215, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-215ENST00000529745 GJA5P36382 358 aa18.9■□□□□ 0.62
CCDC90B-215ENST00000529745 ZAP70P43403 619 aa18.9■□□□□ 0.62
CCDC90B-215ENST00000529745 MAP3K10Q02779 954 aa18.9■□□□□ 0.62
CCDC90B-215ENST00000529745 VGLL4Q14135 290 aa18.9■□□□□ 0.62
CCDC90B-215ENST00000529745 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.9■□□□□ 0.62
CCDC90B-215ENST00000529745 ZNF341Q9BYN7 854 aa18.9■□□□□ 0.62
CCDC90B-215ENST00000529745 SNRKQ9NRH2 765 aa18.9■□□□□ 0.62
CCDC90B-215ENST00000529745 RAI14Q9P0K7 980 aa18.9■□□□□ 0.62
CCDC90B-215ENST00000529745 DOCK1Q14185 1865 aa18.89■□□□□ 0.61
CCDC90B-215ENST00000529745 TRPA1O75762 1119 aa18.89■□□□□ 0.61
CCDC90B-215ENST00000529745 RGS3P49796 1198 aa18.89■□□□□ 0.61
CCDC90B-215ENST00000529745 PPP4CP60510 307 aa18.89■□□□□ 0.61
CCDC90B-215ENST00000529745 TCP10Q12799 353 aa18.89■□□□□ 0.61
CCDC90B-215ENST00000529745 IL1RAPL2Q9NP60 686 aa18.89■□□□□ 0.61
CCDC90B-215ENST00000529745 CSADQ9Y600 493 aa18.89■□□□□ 0.61
CCDC90B-215ENST00000529745 SIPA1L1O43166 1804 aa18.88■□□□□ 0.61
CCDC90B-215ENST00000529745 MYH7P12883 1935 aa18.88■□□□□ 0.61
CCDC90B-215ENST00000529745 SPDYE5A6NIY4 337 aa18.88■□□□□ 0.61
CCDC90B-215ENST00000529745 ALDH1A1P00352 501 aa18.88■□□□□ 0.61
CCDC90B-215ENST00000529745 HABP4Q5JVS0 413 aaKnown RBP18.88■□□□□ 0.61
CCDC90B-215ENST00000529745 OPTNQ96CV9 577 aa18.88■□□□□ 0.61
CCDC90B-215ENST00000529745 WRNIP1Q96S55 665 aa18.88■□□□□ 0.61
CCDC90B-215ENST00000529745 DDX4Q9NQI0 724 aaKnown RBP18.88■□□□□ 0.61
CCDC90B-215ENST00000529745 SNCAIPQ9Y6H5 919 aa18.88■□□□□ 0.61
CCDC90B-215ENST00000529745 MKI67P46013 3256 aaKnown RBP18.88■□□□□ 0.61
CCDC90B-215ENST00000529745 PHIPQ8WWQ0 1821 aa18.88■□□□□ 0.61
CCDC90B-215ENST00000529745 NOL9Q5SY16 702 aaKnown RBP18.87■□□□□ 0.61
CCDC90B-215ENST00000529745 NAA16Q6N069 864 aaPredicted RBP18.87■□□□□ 0.61
CCDC90B-215ENST00000529745 SH3BP5LQ7L8J4 393 aa18.87■□□□□ 0.61
CCDC90B-215ENST00000529745 ZFPM1Q8IX07 1006 aa18.87■□□□□ 0.61
CCDC90B-215ENST00000529745 ELP3Q9H9T3 547 aa18.87■□□□□ 0.61
CCDC90B-215ENST00000529745 PIH1D3Q9NQM4 214 aaKnown RBP18.87■□□□□ 0.61
CCDC90B-215ENST00000529745 ATAD5Q96QE3 1844 aa18.86■□□□□ 0.61
CCDC90B-215ENST00000529745 MKRN3Q13064 507 aaKnown RBP18.86■□□□□ 0.61
CCDC90B-215ENST00000529745 ERO1BQ86YB8 467 aa18.86■□□□□ 0.61
CCDC90B-215ENST00000529745 MS4A4AQ96JQ5 239 aa18.86■□□□□ 0.61
CCDC90B-215ENST00000529745 PTPRFP10586 1907 aa18.86■□□□□ 0.61
CCDC90B-215ENST00000529745 MYH1P12882 1939 aa18.86■□□□□ 0.61
CCDC90B-215ENST00000529745 BAG3O95817 575 aa18.85■□□□□ 0.61
CCDC90B-215ENST00000529745 PLCG2P16885 1265 aa18.85■□□□□ 0.61
CCDC90B-215ENST00000529745 IFNL1Q8IU54 200 aa18.85■□□□□ 0.61
CCDC90B-215ENST00000529745 CERS3Q8IU89 383 aa18.85■□□□□ 0.61
CCDC90B-215ENST00000529745 LRRCC1Q9C099 1032 aa18.85■□□□□ 0.61
CCDC90B-215ENST00000529745 DCTPP1Q9H773 170 aa18.85■□□□□ 0.61
CCDC90B-215ENST00000529745 DDX60LQ5H9U9 1706 aaKnown RBP18.84■□□□□ 0.61
CCDC90B-215ENST00000529745 DDTLA6NHG4 134 aaPredicted RBP18.84■□□□□ 0.61
CCDC90B-215ENST00000529745 TBC1D12O60347 775 aa18.84■□□□□ 0.61
CCDC90B-215ENST00000529745 IFIT2P09913 472 aaKnown RBP18.84■□□□□ 0.61
CCDC90B-215ENST00000529745 TTF1Q15361 905 aaPredicted RBP18.84■□□□□ 0.61
CCDC90B-215ENST00000529745 MIGA2Q7L4E1 593 aa18.84■□□□□ 0.61
CCDC90B-215ENST00000529745 CTU1Q7Z7A3 348 aaKnown RBP18.84■□□□□ 0.61
CCDC90B-215ENST00000529745 YTHDC1Q96MU7 727 aaKnown RBP18.84■□□□□ 0.61
CCDC90B-215ENST00000529745 NOL10Q9BSC4 688 aaKnown RBP18.84■□□□□ 0.61
CCDC90B-215ENST00000529745 PHF20L1A8MW92 1017 aa18.83■□□□□ 0.6
CCDC90B-215ENST00000529745 IGF2BP3O00425 579 aaKnown RBP eCLIP18.83■□□□□ 0.6
CCDC90B-215ENST00000529745 INPP5BP32019 993 aa18.83■□□□□ 0.6
CCDC90B-215ENST00000529745 GTF2A2P52657 109 aa18.83■□□□□ 0.6
CCDC90B-215ENST00000529745 PPATQ06203 517 aa18.83■□□□□ 0.6
CCDC90B-215ENST00000529745 PPIL2Q13356 520 aa18.83■□□□□ 0.6
CCDC90B-215ENST00000529745 ADGRA1Q86SQ6 560 aa18.83■□□□□ 0.6
CCDC90B-215ENST00000529745 TEX11Q8IYF3 940 aa18.83■□□□□ 0.6
CCDC90B-215ENST00000529745 CNKSR2Q8WXI2 1034 aa18.83■□□□□ 0.6
CCDC90B-215ENST00000529745 ZKSCAN4Q969J2 545 aaPredicted RBP18.83■□□□□ 0.6
CCDC90B-215ENST00000529745 OSBPL5Q9H0X9 879 aaPredicted RBP18.83■□□□□ 0.6
CCDC90B-215ENST00000529745 ANTXR1Q9H6X2 564 aa18.83■□□□□ 0.6
CCDC90B-215ENST00000529745 HPS5Q9UPZ3 1129 aa18.83■□□□□ 0.6
CCDC90B-215ENST00000529745 APBB1O00213 710 aa18.82■□□□□ 0.6
CCDC90B-215ENST00000529745 ATP5JP18859 108 aa18.82■□□□□ 0.6
CCDC90B-215ENST00000529745 MAP3K12Q12852 859 aa18.82■□□□□ 0.6
CCDC90B-215ENST00000529745 PICALMQ13492 652 aa18.82■□□□□ 0.6
CCDC90B-215ENST00000529745 OTUD7BQ6GQQ9 843 aa18.82■□□□□ 0.6
CCDC90B-215ENST00000529745 SH3RF3Q8TEJ3 882 aaPredicted RBP18.82■□□□□ 0.6
CCDC90B-215ENST00000529745 PTPN18Q99952 460 aa18.82■□□□□ 0.6
CCDC90B-215ENST00000529745 ZCCHC17Q9NP64 241 aaKnown RBP18.82■□□□□ 0.6
CCDC90B-215ENST00000529745 AATFQ9NY61 560 aaKnown RBP eCLIP18.82■□□□□ 0.6
CCDC90B-215ENST00000529745 IDH1O75874 414 aaKnown RBP18.81■□□□□ 0.6
CCDC90B-215ENST00000529745 AAMPQ13685 434 aa18.81■□□□□ 0.6
CCDC90B-215ENST00000529745 ZSCAN29Q8IWY8 852 aaPredicted RBP18.81■□□□□ 0.6
CCDC90B-215ENST00000529745 OTUD5Q96G74 571 aa18.81■□□□□ 0.6
CCDC90B-215ENST00000529745 DHX36Q9H2U1 1008 aaKnown RBP18.81■□□□□ 0.6
CCDC90B-215ENST00000529745 KCNH4Q9UQ05 1017 aa18.81■□□□□ 0.6
CCDC90B-215ENST00000529745 PCDHB15Q9Y5E8 787 aa18.81■□□□□ 0.6
CCDC90B-215ENST00000529745 NAV1Q8NEY1 1877 aa18.8■□□□□ 0.6
CCDC90B-215ENST00000529745 GPR25O00155 361 aa18.8■□□□□ 0.6
CCDC90B-215ENST00000529745 TBC1D8O95759 1140 aa18.8■□□□□ 0.6
CCDC90B-215ENST00000529745 CYP7A1P22680 504 aa18.8■□□□□ 0.6
CCDC90B-215ENST00000529745 BRI3BPQ8WY22 251 aa18.8■□□□□ 0.6
CCDC90B-215ENST00000529745 NDUFB9Q9Y6M9 179 aa18.8■□□□□ 0.6
CCDC90B-215ENST00000529745 IRF6O14896 467 aa18.79■□□□□ 0.6
CCDC90B-215ENST00000529745 CTNND1O60716 968 aaKnown RBP18.79■□□□□ 0.6
CCDC90B-215ENST00000529745 METTL16Q86W50 562 aaKnown RBP18.79■□□□□ 0.6
CCDC90B-215ENST00000529745 SCYL3Q8IZE3 742 aa18.79■□□□□ 0.6
CCDC90B-215ENST00000529745 HERC5Q9UII4 1024 aaKnown RBP18.79■□□□□ 0.6
CCDC90B-215ENST00000529745 FLT1P17948 1338 aa18.78■□□□□ 0.6
CCDC90B-215ENST00000529745 CCL15-CCL14A0A0B4J2E2 113 aa18.78■□□□□ 0.6
CCDC90B-215ENST00000529745 CETPP11597 493 aa18.78■□□□□ 0.6
CCDC90B-215ENST00000529745 SNAPC2Q13487 334 aa18.78■□□□□ 0.6
CCDC90B-215ENST00000529745 CCL15Q16663 113 aa18.78■□□□□ 0.6
CCDC90B-215ENST00000529745 MAGEB6Q8N7X4 407 aa18.78■□□□□ 0.6
CCDC90B-215ENST00000529745 ZNF296Q8WUU4 475 aaPredicted RBP18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms